Anadromous alewives (Alosa pseudoharengus) are abundant in the Canadian Maritimes, where they support lucrative commercial fisheries. Little is known about their coastal movement, and their potential ...to interact with anthropogenic structures. Acoustic telemetry can provide detailed information on the spatiotemporal distribution and survival of fishes in coastal areas, using information transmitted from tagged fishes and recorded by moored receivers. However, few acoustic telemetry studies have been performed on clupeids as they are extremely sensitive to handling, and are often compromised by surgical tag implantation. This research assesses the feasibility of a surgical tagging protocol using novel High Residency acoustic tags in alewives, and establishes a baseline of short-term tagging effects. Alewives from the Gaspereau River population were tagged between 2018 (n = 29) and 2019 (n = 96) with non-transmitting models of Vemco/Innovasea V5 HR tags. Tagging effects were evaluated based on recovery rate, reflex impairment, and necropsy-based health assessments. Alewives responded well to tagging, with low mortality (3%) and no observed instances of tag shedding 72 hours post-surgery. The use of sutures to close the incision site had no effect on recovery times. Water temperature and spawning condition had the greatest effect on the behavioural response of fish to tagging. Our findings suggest that, with proper handling and smaller acoustic tags, telemetry studies on alewives are feasible.
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DOBA, IZUM, KILJ, NUK, PILJ, PNG, SAZU, SIK, UILJ, UKNU, UL, UM, UPUK
Metapopulation structure is typically thought to increase regional species abundance, promote population persistence, and aid in the re-establishment of extirpated populations. However, the ...underlying theoretical models tended to assume high productivity, making the conservation benefit of metapopulation structure uncertain for endangered species with low productivity. We simulated population assemblages (N = 50) of diadromous fishes under high to low productivity scenarios to explicitly assess how straying (movement from natal to non-natal rivers) contributes to changes in species abundance and extinction risk. The population aggregation exhibited greater total abundance from source–sink dynamics and also exhibited the rescue effect when productivity remained moderately high. However, straying did not ensure persistence of nonviable populations or enable population re-establishment when productivity was low. These results were robust to a wide range of alternate spatial and life-history parameterizations of the simulation model. Relative to a real-world population aggregation of endangered Atlantic salmon (Salmo salar), our results would argue for a shift in remediation priorities to prevent extinction. Although there is strong evolutionary justification for maintaining widespread distributions of endangered diadromous species, the immediate numerical consequences of this approach may hinder recovery.
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Telemetry is increasingly being used to estimate population-level survival rates. However, these estimates may be affected by the detectability of telemetry tags and are reliant on the assumption ...that telemetry data represent the movements of the tagged fish. Predation on tagged fish has the potential to bias survival estimates, and unlike the issue of detectability, methods to correct for the resulting bias (termed “predation bias”) are not yet developed. In an acoustic telemetry study on inner Bay of Fundy Atlantic salmon (Salmo salar) smolts during 2008 and 2011, unusual tag detection patterns were indicative that some data may have been representative of the movements of predators rather than smolts. To incorporate predation effects into the resulting survival estimates, a suite of 11 summary migration metrics were compared between Atlantic salmon smolts and striped bass (Morone saxatilis). Cluster analyses revealed that 2.4% to 13.6% of tags implanted in smolts exhibited migration patterns more similar to striped bass than to other smolts, which was interpreted here as evidence of predation. Reassigning the fate of these tags as “depredated–died” reduced estimated survival from 43.5% to 41.1% in 2008 and from 32.6% to 19.0% in 2011 relative to a traditional mark–recapture model, illustrating the effect of predation bias in this case study.
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To effectively protect at‐risk sharks, resource managers and conservation practitioners must have a good understanding of how fisheries removals contribute to changes in abundance and how regulatory ...restrictions may impact a population trajectory. This means they need to know the number of animals being removed from a population and whether a given number of removals will lead to population increases or declines. For white shark (Carcharodon carcharias), theoretical quantities like the intrinsic rate of population increase or rebound potential (ability to increase in size following decline) are difficult to conceptualize in terms of real‐world abundance changes, which limits our ability to answer practical management questions. To address this shortfall, we designed a simulation model to evaluate how our understanding of longevity and life history variability of white shark affects our understanding of population trends in the Northwest Atlantic. Then, we quantified the magnitude of removals that could have caused historical population declines, compared these to biologically based reference points, and explored the removal scenarios which would result in population increase. Our results suggest that removals on the order of 100s of juveniles per year could have resulted in population‐level declines in excess of 60% during the 1970s and 1980s. Conservation actions implemented since the 1990s would have needed to be nearly 100% effective at preventing fishing mortality in order for the population to double in abundance over the last 30 years. Total removals from all fleets needed to be exceptionally small to keep them below biological reference points for white shark in the Northwest Atlantic. The population's inherent vulnerability to fishing pressure reaffirms the need for restrictive national and international conservation measures, even under a situation of abundance increase.
We designed a simulation model to evaluate how our understanding of longevity and life history variability of white shark affects our understanding of population trends in the North Atlantic. Then, we quantified the magnitude of removals that could have caused historical population declines, compared these to biologically based reference points, and explored the removal scenarios which would result in population increase. Our results demonstrate the inherent vulnerability of the species to fishing pressure and reaffirm the need for restrictive international conservation measures to protect the population, even under a situation of abundance increase.
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FZAB, GIS, IJS, KILJ, NLZOH, NUK, OILJ, SBCE, SBMB, UL, UM, UPUK
A rare but natural polymorphism in the HIV-1 envelope (Env) glycoprotein, lysine at position 425 was selected as a mutation conferring resistance to maraviroc (MVC)
. N425K has not been identified in ...HIV-infected individuals failing an MVC-based treatment. This study reports that the rare K425 polymorphism in an HIV-1 subtype A Env has increased affinity for CD4, resulting in faster host cell entry kinetics and the ability to scavenge for low cell surface expression of CD4 to mediate entry. Whereas the subtype A wild-type isolate-74 Env (N425) is inhibited by soluble (s) CD4, HIV-1 with K425 A74 Env shows enhanced infection and the ability to infect CCR5+ cells when pretreated with sCD4. Upon adding K425 or N425 HIV-1 to CD4
/CCR5+ cells along with RANTES/CCL3, only K425 HIV-1 was able to infect cells when CCR5 recycled/returned to the cell surface at 12 h post-treatment. These findings suggest that upon binding to CD4, K425 Env may maintain a stable State 2 "open" conformation capable of engaging CCR5 for entry. Only K425 was significantly more sensitivity than wild-type N425 A74 to inhibition by the CD4 binding site (bs) compound, BMS-806, the CD4bs antibody, VRC01 and N6, and the single-chain CD4i antibody, SCm9. K425 A74 was also capable of activating B cells expressing the VRC01 surface immunoglobulin. In summary, despite increased replicative fitness, we propose that K425 HIV-1 may be counterselected within infected individuals if K425 HIV-1 is rapidly eliminated by CD4bs-neutralizing antibodies.
Typically, a natural amino acid polymorphism is found as the wild-type sequence in the HIV-1 population if it provides a selective advantage to the virus. The natural K425 polymorphism in HIV-1 Env results in higher host cell entry efficiency and greater replicative fitness by virtue of its high binding affinity to CD4. The studies presented herein suggest that the rare K425 HIV-1, compared to the common N425 HIV-1, may be more sensitive to inhibition by CD4bs-neutralizing antibodies (i.e., antibodies that bind to the CD4 binding pocket on the HIV-1 envelope glycoprotein). If CD4bs antibodies did emerge in an infected individual, the K425 HIV-1 may be hypersensitive to inhibition, and thus this K425 virus variant may be removed from the HIV-1 swarm despite its higher replication fitness. Studies are now underway to determine whether addition of the K425 polymorphism into the Envelope-based HIV-1 vaccines could enhance protective immunity.
Abstract
The anadromous alewife is a commercially fished clupeid in Atlantic Canada, whose oceanic migration is poorly understood. Migration of alewives is presently investigated from the lower ...reaches of Gaspereau River into Minas Basin, Bay of Fundy. Seventy-five post-spawning adults were tagged on their downstream migration; within two days of being tagged, most alewives had left Gaspereau River and 57 entered into the Southern Bight of Minas Basin. Thirty-one alewives were detected in Minas Passage and their average time from tagging to final detection was 28 days with standard deviation of 11 days. None of the alewives were detected in Minas Passage until day 20 after the start of tagging. After day 20, the residence timescale in Minas Basin was only 8.8 days with 95% CI of 8.4–9.3 days. Fast tidal currents prevail in much of the study area, and alewives travelled many large tidal excursions in Minas Basin and Minas Passage. Separation distances between pairs of alewives increased greatly after day 20, indicating tidal mixing over large distances within the study area. Offshore movement was associated with seasonal warming, with alewives moving down the spatial temperature gradient and into deeper waters. Offshore, larger tidal displacements widely dispersed tagged alewives through Minas Basin and to Minas Passage. During transit of Gaspereau River, 18 ± 2 alewives were lost with corroborating evidence of mortality for 4 of these. By day 20, the apparent mortality within Minas Basin was ≤ 10 alewives. Individual alewives were observed to make many transits through Minas Passage during their migration, where they may become exposed to in-stream tidal turbines.
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Acoustic telemetry is a useful tool to monitor the estuarine survival and behaviour of Atlantic salmon postsmolts. Most frequently, survival is reported as the static fraction of tagged postsmolts ...detected, and while the timing or location of mortality may be reported, covariates of survival or the relationship between migratory behaviour and survival are less often described. In this study, we used acoustic telemetry to follow Atlantic salmon smolts migrating to sea from four rivers in Nova Scotia, Canada. Further, we tested the relationship between migratory behaviour and survival and used mark-recapture models to examine the role of body length and tag-to-body mass as survival covariates. Survival was most heavily impacted in estuarine habitats closest to head-of-tide. Survival was affected by body length at three of four sites. The shape and spatial variability of the body length--survival relationship provided insight on mortality vectors, highlighting the potential roles of predation and osmotic stress. Survival was not influenced by repeated landward-seaward migratory movements; however, there was a significant correlation between residency and survival.
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Landscape genetics affords a potential analysis framework to evaluate the effect of contemporary land use on endangered species at a population level. However, historical patterns of population ...connectivity need to be accounted for prior to testing for the contemporary effect of threats. The goals of this study were to (1) optimally describe historical patterns in population connectivity for a diadromous fish species before (2) evaluating whether residual genetic variation was correlated with ecological changes arising from several types of land use. Using endangered Atlantic salmon populations as a case study, we evaluated whether historical patterns in population connectivity were more likely to result from dispersal limitation (isolation by distance) relative to habitat choice and reproductive success (isolation by environment). Second, we used Reciprocal Causal Modeling to identify the types of land use contributing to three threat indices, and subsequently Multiple Regression on Distance Matrices to evaluate the relative severity of each. These analyses suggest that straying Atlantic salmon avoid watersheds with reduced water quality (resulting from acidification and abandoned mines) and higher road density, yet are not responding to watershed fragmentation (from road-river crossings and dams) at a population level. This study is among the first to explicitly compare alternate behavioural hypotheses leading to dispersal patterns for diadromous fishes and to quantitatively assess freshwater threats for Atlantic salmon at a population level using landscape genetics.
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EMUNI, FIS, FZAB, GEOZS, GIS, IJS, IMTLJ, KILJ, KISLJ, MFDPS, NLZOH, NUK, OILJ, PNG, SAZU, SBCE, SBJE, SBMB, SBNM, UKNU, UL, UM, UPUK, VKSCE, ZAGLJ
We developed a Bayesian hierarchical model to estimate annual mortality of repeat-spawning Atlantic salmon, Salmo salar, that distinguishes between mortality rates and the confounding effects of ...consecutive-year and alternate-year repeat-spawning strategies. The model provides annual estimates of two mortality rates: mortality in the first year (Z1), a time period during which salmon are primarily in freshwater (staging, spawning, and overwintering) followed by a brief period at sea, and mortality in the second year (Z2) when salmon are predominantly at sea. When fit to data for the LaHave River (Nova Scotia, Canada) salmon population, Z1 showed an increasing trend throughout the time series, whereas Z2 also increased but in a single, stepwise manner. Once a time series of mortality rates was separated from the other life-history parameters, we were able to demonstrate how they could be used for examining the influence of environmental conditions by comparing the estimated mortality rate time series with the North Atlantic Oscillation Index (NAOI). This comparison uncovered a statistically significant correlation between the NAOI and the survival in the second year after spawning that would not have been evident had the mortality estimation model not been developed.
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Poecilogony is the production of more than one type of young within a single species of marine invertebrate. We chose a poecilogonous polychaete to investigate potential differences in morphogenesis ...among offspring that are polymorphic in dispersal potentials (planktonic, benthic) and trophic modes (planktotrophy, adelphophagy). Differences in morphogenesis occur and are strongly influenced by maternal type. Females that provide extra-embryonic nutrition (as nurse eggs; type III females) also produce offspring with an accelerated onset of juvenile traits, relative to planktotrophic offspring of females that do not provide extra-embryonic nutrition (type I females). Thus, progeny of some females appear morphologically preadapted for a benthic lifestyle. Surprisingly, differences in phenotype among offspring do not parallel offspring ecotype, as offspring with early onset of juvenile traits (III) are ecologically bimodal. Some Type III offspring eat the nurse eggs (adelphophagy), have accelerated development, and hatch as benthic juveniles. In contrast, their siblings hatch as small, planktotrophic, dispersive larvae that are morphologically similar to their type III siblings, but ecologically similar to Type I planktotrophic larvae. We propose that poecilogony evolved through sequence heterochrony in morphogenesis with accelerated onset of juvenile traits in type III offspring. In addition, we suggest that heterochrony in life-history events (hatching, metamorphosis) also occurs, thereby generating offspring that are dimorphic in both phenotype and ecotype. Over time, selection acting on different levels of ontogeny (morphogenesis vs. dispersal) may balance this polymorphism and allow poecilogony to persist.
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BFBNIB, FZAB, GIS, IJS, KILJ, NLZOH, NMLJ, NUK, OILJ, PNG, SAZU, SBCE, SBMB, UL, UM, UPUK
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