Circular RNAs (circRNAs) play a critical regulatory role in cancer progression. However, the underlying mechanisms of circRNAs in hepatocellular carcinoma (HCC) metastasis remain mostly unknown.
...Has_circ_0003998 (circ0003998) was identified by RNAs sequencing in HCC patients with /without portal vein tumor thrombus (PVTT) metastasis. The expression level of circ0003998 was further detected by in situ hybridization on tissues microarray (ISH-TMA) and qRT-PCR in 25 HCC patients with PVTT metastasis. Moreover, the 25 HCC patients with PVTT metastasis and 50 HCC patients without PVTT metastasis were recruited together to analyze the correlation between circ0003998 expression and HCC clinical characteristics. Transwell, migration and CCK8 assays, as well as nude mice model of lung or liver metastasis were used to evaluate the role of circ0003998 in epithelial to mesenchymal transition (EMT) in HCC. The regulatory mechanisms of circ0003998 in miR-143-3p and PCBP1 were determined by dual-luciferase reporter assay, nuclear-cytoplasmic fractionation, fluorescent in situ hybridization, RNA pull- down, microRNA sequence, western blot and RNA immunoprecipitation.
Compared with adjacent normal liver tissues (ANL), circ0003998 expression was significantly upregulated in PVTT tissues and HCC tissues, and its expression correlates with the aggressive characteristics of HCC patients. Further assays suggested that circ0003998 promoted EMT of HCC both in vitro and in vivo. Mechanistically, our data indicated that circ0003998 may act as a ceRNA (competing endogenous RNA) of microRNA-143-3p to relieve the repressive effect on EMT-related stimulator, FOSL2; meanwhile, circ0003998 could bind with PCBP1-poly(rC) binding protein 1 (PCBP1) to increase the expression level of EMT-related genes, CD44v6.
Circ0003998 promotes EMT of HCC by circ0003998/miR-143-3p/FOSL2 axis and circ0003998 /PCBP1/CD44v6 axis.
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IZUM, KILJ, NUK, PILJ, PNG, SAZU, UL, UM, UPUK
Single atom catalysts (SACs) that integrate the merits of homogeneous and heterogeneous catalysts have been attracting considerable attention in recent years. The individual metal atoms of SACs can ...be stabilized on supports through various unsaturated chemical sites or space confinement for achieving the maximized atom utilization efficiency. Aside from the development of strategies for preparing high loading and high purity SACs, another key challenge in this field is precisely manipulating the geometric and electronic structure of catalytically active single metal sites, thus rendering the catalysts exceptionally reactive, selective, and stabile compared to their bulk counterparts. This review summarizes recent advancements in SACs for heterogeneous catalysis from the perspective of local structural regulation and the synergistic coupling effect between metal species and supports. Special emphasis is placed on the elucidation of the catalytic structure‐performance relationship in terms of coordination environment, valence state and metal‐support interactions by advanced characterization and theoretical studies. Select in situ or operando characterization techniques for tracking the SACs’ structure evolution under realistic conditions are highlighted. Finally, the challenges and opportunities are discussed to offer insight into the rational design of more intriguing SACs with high activity and distinct chemoselectivity.
Single atom catalysts have emerged as a new frontier due to almost 100% atom utilization efficiency along with outstanding catalytic performance. This review highlights the recent advancements in tailoring local structure and metal‐support interaction of single atom catalysts to gain a deeper insight into the structure‐performance relationship. The challenges and opportunities in this field are further discussed.
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FZAB, GIS, IJS, KILJ, NLZOH, NUK, OILJ, SBCE, SBMB, UL, UM, UPUK
Next-generation sequencing of cellular RNA (RNA-seq) is rapidly becoming the cornerstone of transcriptomic analysis. However, sequencing errors in the already short RNA-seq reads complicate ...bioinformatics analyses, in particular alignment and assembly. Error correction methods have been highly effective for whole-genome sequencing (WGS) reads, but are unsuitable for RNA-seq reads, owing to the variation in gene expression levels and alternative splicing.
We developed a k-mer based method, Rcorrector, to correct random sequencing errors in Illumina RNA-seq reads. Rcorrector uses a De Bruijn graph to compactly represent all trusted k-mers in the input reads. Unlike WGS read correctors, which use a global threshold to determine trusted k-mers, Rcorrector computes a local threshold at every position in a read.
Rcorrector has an accuracy higher than or comparable to existing methods, including the only other method (SEECER) designed for RNA-seq reads, and is more time and memory efficient. With a 5 GB memory footprint for 100 million reads, it can be run on virtually any desktop or server. The software is available free of charge under the GNU General Public License from https://github.com/mourisl/Rcorrector/.
MXenes, layered transition metal carbides/nitrides, have already received considerable attention in various research areas including but not limited to energy storage/conversion and ...photo/electrocatalysis. In fact, the intrinsic property of MXenes is highly tunable by controlling the surface terminations and interlayer spacing. Moreover, synchrotron radiation X‐ray characterizations have shown high potential for exploring the causal relationship between the properties and structure of MXenes. Particularly, operando X‐ray measurements could provide useful insight for better understanding the dynamic process of MXene‐based energy materials. In this review, a comprehensive summary of recent studies on surface controlling, interlayer engineering, and the synchrotron‐based characterizations of MXenes is presented. The outlook of MXenes and applications of advanced X‐ray characterizations are also discussed.
In this review, the structure and synthesis strategies of MXenes are briefly discussed. Surface controlling, interlayer engineering toward the tunable structure of MXenes, and relevant applications are also comprehensively summarized. Particularly, the progresses and advantages of synchrotron‐based characterizations in the exploration of MXenes' structure and dynamic mechanism are emphasized, and the challenges and prospects are proposed as well.
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BFBNIB, FZAB, GIS, IJS, KILJ, NLZOH, NUK, OILJ, SBCE, SBMB, UL, UM, UPUK
The vascular response to pro-atherosclerotic factors is a multifactorial process involving endothelial cells (ECs), macrophages (MACs), and smooth muscle cells (SMCs), although the mechanism by which ...these cell types communicate with each other in response to environmental cues is yet to be understood. Here, we show that miR-155, which is significantly expressed and secreted in Krüppel-like factor 5 (KLF5)-overexpressing vascular smooth muscle cells (VSMCs), is a potent regulator of endothelium barrier function through regulating endothelial targeting tight junction protein expression. VSMCs-derived exosomes mediate the transfer of KLF5-induced miR-155 from SMCs to ECs, which, in turn, destroys tight junctions and the integrity of endothelial barriers, leading to an increased endothelial permeability and enhanced atherosclerotic progression. Moreover, overexpression of miR-155 in ECs inhibits endothelial cell proliferation/migration and re-endothelialization in vitro and in vivo and thus increases vascular endothelial permeability. Blockage of the exosome-mediated transfer of miR-155 between these two cells may serve as a therapeutic target for atherosclerosis.
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GEOZS, IJS, IMTLJ, KILJ, KISLJ, NLZOH, NUK, OILJ, PNG, SAZU, SBCE, SBJE, UILJ, UL, UM, UPCLJ, UPUK, ZAGLJ, ZRSKP
The electrochemical performance of vanadium‐oxide‐based cathodes in aqueous zinc‐ion batteries (ZIBs) depends on their degree of crystallinity and composite state with carbon materials. An in situ ...electrochemical induction strategy was developed to fabricate a metal–organic‐framework‐derived composite of amorphous V2O5 and carbon materials (a‐V2O5@C) for the first time, where V2O5 is in an amorphous state and uniformly distributed in the carbon framework. The amorphous structure endows V2O5 with more isotropic Zn2+ diffusion routes and active sites, resulting in fast Zn2+ transport and high specific capacity. The porous carbon framework provides a continuous electron transport pathway and ion diffusion channels. As a result, the a‐V2O5@C composites display extraordinary electrochemical performance. This work will pave the way toward design of ZIB cathodes with superior rate performance.
In situ electrochemical induction of crystalline V2O3‐containing MIL‐88B(V) and carbon material yields a composite termed a‐V2O5@C. The a‐V2O5@C composites display appreciable electrochemical performance due to the unique amorphous structure of V2O5 and its composite state with carbon.
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BFBNIB, FZAB, GIS, IJS, KILJ, NLZOH, NUK, OILJ, SBCE, SBMB, UL, UM, UPUK
Developing efficient electrocatalysts for alkaline water electrolysis is central to substantial progress of alkaline hydrogen production. Herein, a Ni5P4 electrocatalyst incorporating single‐atom Ru ...(Ni5P4‐Ru) is synthesized through the filling of Ru3+ species into the metal vacancies of nickel hydroxides and subsequent phosphorization treatment. Electron paramagnetic resonance spectroscopy, X‐ray‐based measurements, and electron microscopy observations confirm the strong interaction between the nickel‐vacancy defect and Ru cation, resulting in more than 3.83 wt% single‐atom Ru incorporation in the obtained Ni5P4‐Ru. The Ni5P4‐Ru as an alkaline hydrogen evolution reaction catalyst achieves low onset potential of 17 mV and an overpotential of 54 mV at a current density of 10 mA cm‐2 together with a small Tafel slope of 52.0 mV decade‐1 and long‐term stability. Further spectroscopy analyses combined with density functional theory calculations reveal that the doped Ru sites can cause localized structure polarization, which brings the low energy barrier for water dissociation on Ru site and the optimized hydrogen adsorption free energy on the interstitial site, well rationalizing the experimental reactivity.
Ni5P4 nanoparticles incorporating single‐atomic Ru are synthesized by a nickel‐vacancy‐assisted method, and meticulous experimental analyses combined with density functional theory calculations confirm that the incorporation of Ru induces localized structural polarization to optimize the catalytic energetics.
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BFBNIB, FZAB, GIS, IJS, KILJ, NLZOH, NUK, OILJ, SBCE, SBMB, UL, UM, UPUK
Effective solid‐state interfacial contact of both the cathode and lithium metal anode with the solid electrolyte (SE) are required to improve the performance of solid‐state lithium metal batteries ...(SSBs). Electro–chemo–mechanical coupling (ECMC) strongly affects the interfacial stability of SSBs. On one hand, mechanical stress strongly influences interfacial contact and causes side reactions. On the other hand, electrochemical reactions such as lithium deposition cause mechanical deformation and stress at electrode/SE interfaces. To solve the degradation/failure problems of interfaces and provide guidelines to construct high‐performance SSBs, the ECMC at electrode/SE interfaces should be comprehensively investigated. In this review, the problems associated with ECMC at electrode/SE interfaces are summarized. The interfacial degradation/failure mechanisms, including the contact and electrochemical stability of interfaces, are introduced. Mechanical factors affecting interfacial contact and lithium deposition are highlighted. Experimental observation and computational analysis methods for electrode/SE interfaces are then summarized. Strategies to construct stable electrode/SE interfaces, such as assembling stress and wetting layers to improve interfacial contact, 3D SE structure, and plating stress relief to suppress lithium dendrite formation, are reviewed. The remaining challenges to better understanding ECMC and related solutions to aid SSB development are discussed.
The failure mechanisms of electrode/solid electrolyte (SE) interfaces in solid‐state lithium metal batteries (SSBs) involve multiscale and multiphysical field coupling. Various in situ observation technologies and corresponding theoretical approaches have been used to investigate the degradation mechanism of SSBs. Based on the experimental and theoretical results, well‐established solutions are explored to construct stable electrode/SE interfaces in SSBs.
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BFBNIB, FZAB, GIS, IJS, KILJ, NLZOH, NUK, OILJ, SBCE, SBMB, UL, UM, UPUK
Herbal medicines (HMs) are much appreciated for their significant contribution to human survival and reproduction by remedial and prophylactic management of diseases. Defining the scientific basis of ...HMs will substantiate their value and promote their modernization. Ever‐increasing evidence suggests that gut microbiota plays a crucial role in HM therapy by complicated interplay with HM components. This interplay includes such activities as: gut microbiota biotransforming HM chemicals into metabolites that harbor different bioavailability and bioactivity/toxicity from their precursors; HM chemicals improving the composition of gut microbiota, consequently ameliorating its dysfunction as well as associated pathological conditions; and gut microbiota mediating the interactions (synergistic and antagonistic) between the multiple chemicals in HMs. More advanced experimental designs are recommended for future study, such as overall chemical characterization of gut microbiota‐metabolized HMs, direct microbial analysis of HM‐targeted gut microbiota, and precise gut microbiota research model development. The outcomes of such research can further elucidate the interactions between HMs and gut microbiota, thereby opening a new window for defining the scientific basis of HMs and for guiding HM‐based drug discovery.
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BFBNIB, FZAB, GIS, IJS, KILJ, NLZOH, NUK, OILJ, SBCE, SBMB, UL, UM, UPUK
Current aqueous Zn batteries (ZBs) seriously suffer from dendrite issues caused by rough electrode surfaces. Despite significant efforts in prolonging lifespan of these batteries, little effort has ...been devoted to dendrite elimination in commercial‐grade cathode loading mass. Instead, demonstrations have only been done at the laboratory level (≤2 mg cm−2). Additionally, new dilemmas regarding change of the proton‐storage behavior and interface pulverization have emerged in turn. Herein, hydrogen‐substituted graphdiyne (HsGDY), with sub‐ångström level ion tunnels and robust chemical stability, is designed as an artificial interface layer to address these issues. This strategy prolongs the symmetric cell lifespan to >2400 h (100 days), which is 37 times larger than without protection (63 h). The simulation of dual fields reveals that HsGDY can redistribute the Zn2+ concentration field by spatially forcing Zn2+ to deviate from the irregular electric field. During practical use, the as‐assembled full batteries deliver a long lifespan 50 000 cycles and remain stable even at a commercial‐grade cathode loading mass of up to 22.95 mg cm−2. This HsGDY‐protection methodology represents great progress in Zn dendrite protection and demonstrates enormous potential in metal batteries.
Aqueous Zn‐based batteries suffering from the dendrite issue show a short lifespan, especially at commercial‐grade cathode loading mass. Hydrogen‐substituted graphdiyne with ion tunnels is employed to eliminate dendrites, based on ion redistribution, achieving a long lifespan of 10 000 cycles at a cathode loading mass of 22.95 mg cm−2. This work sheds light on tackling the dendrite issue encountered by metal batteries.
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BFBNIB, FZAB, GIS, IJS, KILJ, NLZOH, NUK, OILJ, SBCE, SBMB, UL, UM, UPUK
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