Zoonotic diseases are of considerable concern to the human population and viruses such as avian influenza (AIV) threaten food security, wildlife conservation and human health. Wild waterfowl and the ...natural wetlands they use are known AIV reservoirs, with birds capable of virus transmission to domestic poultry populations. While infection risk models have linked migration routes and AIV outbreaks, there is a limited understanding of wild waterfowl presence on commercial livestock facilities, and movement patterns linked to natural wetlands. We documented 11 wild waterfowl (three Anatidae species) in or near eight commercial livestock facilities in Washington and California with GPS telemetry data. Wild ducks used dairy and beef cattle feed lots and facility retention ponds during both day and night suggesting use for roosting and foraging. Two individuals (single locations) were observed inside poultry facility boundaries while using nearby wetlands. Ducks demonstrated high site fidelity, returning to the same areas of habitats (at livestock facilities and nearby wetlands), across months or years, showed strong connectivity with surrounding wetlands, and arrived from wetlands up to 1251 km away in the week prior. Telemetry data provides substantial advantages over observational data, allowing assessment of individual movement behaviour and wetland connectivity that has significant implications for outbreak management. Telemetry improves our understanding of risk factors for waterfowl–livestock virus transmission and helps identify factors associated with coincident space use at the wild waterfowl–domestic livestock interface. Our research suggests that even relatively small or isolated natural and artificial water or food sources in/near facilities increases the likelihood of attracting waterfowl, which has important consequences for managers attempting to minimize or prevent AIV outbreaks. Use and interpretation of telemetry data, especially in near‐real‐time, could provide key information for reducing virus transmission risk between waterfowl and livestock, improving protective barriers between wild and domestic species, and abating outbreaks.
Full text
Available for:
BFBNIB, DOBA, FZAB, GIS, IJS, IZUM, KILJ, NLZOH, NUK, OILJ, PILJ, PNG, SAZU, SBCE, SBMB, UILJ, UKNU, UL, UM, UPUK
Renewable energy facilities are a key part of mitigating climate change, but can pose threats to wild birds and bats, most often through collisions with infrastructure. Understanding collision risk ...and the factors affecting it can help minimize impacts on wild populations. For wind turbines, flight altitude is a major factor influencing collision risk, and altitude‐selection analyses can evaluate when and why animals fly at certain altitudes under certain conditions.
We used GPS tags to track Pacific Flyway geese (Pacific greater white‐fronted goose, tule greater white‐fronted goose and lesser snow goose) on transoceanic migrations between Alaska and the Pacific Coast of the contiguous United States, an area where offshore windfarm development is beginning. We evaluated how geographic and environmental covariates affected (1) whether birds were at rest on the water versus in flight (binomial model) and (2) altitude selection when in flight (similar to a step‐selection framework). We then used a Monte Carlo simulation to predict the probability of flying at each altitude under various conditions, considering both the fly/rest decision and altitude selection.
In both spring and fall, geese showed strong selection for altitudes within the expected rotor‐swept zone (20–200 m asl), with 56% of locations expected to be within the rotor‐swept zone under mean daylight conditions and 28% at night. This indicates a high possibility that migrating geese may be at risk of collision when passing through windfarms. Although there was some variation across subspecies, geese were most likely to be within the rotor‐swept zone with little wind or light tailwinds, low clouds, little to no precipitation and moderate to cool air temperatures. Geese were unlikely to be in the rotor‐swept zone at night, when most individuals were at rest on the water.
Synthesis and applications. These results could be used to inform windfarm management, including decisions to shut down turbines when collision risk is high. The altitude‐selection framework we demonstrate could facilitate further study of other bird species to develop a holistic view of how windfarms in this area could affect the migratory bird community as a whole.
These results could be used to inform windfarm management, including decisions to shut down turbines when collision risk is high. The altitude‐selection framework we demonstrate could facilitate further study of other bird species to develop a holistic view of how windfarms in this area could affect the migratory bird community as a whole.
Full text
Available for:
BFBNIB, FZAB, GIS, IJS, KILJ, NLZOH, NUK, OILJ, SAZU, SBCE, SBMB, UL, UM, UPUK
Long-term environmental management to prevent waterfowl population declines is informed by ecology, movement behavior and habitat use patterns. Extrinsic factors, such as human-induced disturbance, ...can cause behavioral changes which may influence movement and resource needs, driving variation that affects management efficacy. To better understand the relationship between human-based disturbance and animal movement and habitat use, and their potential effects on management, we GPS tracked 15 dabbling ducks in California over ~4-weeks before, during and after the start of a recreational hunting season in October/November 2018. We recorded locations at 2-min intervals across three separate 24-h tracking phases: Phase 1) two weeks before the start of the hunting season (control (undisturbed) movement); Phase 2) the hunting season opening weekend; and Phase 3) a hunting weekend two weeks after opening weekend. We used GLMM models to analyze variation in movement and habitat use under hunting pressure compared with ‘normal’ observed patterns prior to commencement of hunting. We also compared responses to differing levels of disturbance related to the time of day (high - shooting/~daytime); moderate - non-lethal (~crepuscular); and low - night). During opening weekend flight (% time and distance) more than doubled during moderate and low disturbance and increased by ~50% during high disturbance compared with the pre-season weekend. Sanctuary use tripled during moderate and low disturbance and increased ~50% during high disturbance. Two weeks later flight decreased in all disturbance levels but was only less than the pre-season levels during high disturbance. In contrast, sanctuary use only decreased at night, although not to pre-season levels, while daytime doubled from ~45% to >80%. Birds adjust rapidly to disturbance and our results have implications for energetics models that estimate population food requirements. Management would benefit from reassessing the juxtaposition of essential sanctuary and feeding habitats to optimize wetland management for waterfowl.
Display omitted
•Human-induced disturbance alters duck flight, energetics, and wetland habitat use.•Disturbance responses assessed with high spatio-temporal GPS waterfowl tracking.•Ducks adjust to lethal disturbance with greater sanctuary use and altered flight.•Increased nocturnal foraging compensates for reduced daytime foraging in sanctuaries.•Wetland management should promote an optimal sanctuary and feeding habitat mosaic.
Full text
Available for:
GEOZS, IJS, IMTLJ, KILJ, KISLJ, NLZOH, NUK, OILJ, PNG, SAZU, SBCE, SBJE, UILJ, UL, UM, UPCLJ, UPUK, ZAGLJ, ZRSKP
To effectively manage species and habitats at multiple scales, population and land managers require rapid information on wildlife use of managed areas and responses to landscape conditions and ...management actions. GPS tracking studies of wildlife are particularly informative to species ecology, habitat use, and conservation. Combining GPS data with administrative data and a diverse suite of remotely sensed, geo-referenced environmental (e.g., climatic) data, would more comprehensively inform how animals interact with and utilize habitats and ecosystems and our goal was to create a conceptual model for a system that would accomplish this – the ‘Automated Interactive Monitoring System (AIMS) for Wildlife’. Our objective for this study was to develop a Customized Wildlife Report (CWR) - the first AIMS for Wildlife deliverable product. CWRs collate and summarize our 8-year GPS tracking dataset of ∼11 million locations from 1338 individual (16 species) avifauna and make actionable, real-time data on animal movements and trends in a specific area of interest available to managers and stakeholders for rapid application in day-to-day management. The CWR exemplar presented in this paper was developed to address needs identified by habitat managers of Sacramento National Wildlife Refuge and illustrates the highly specific, information offered and how it contributes to assessing the efficacy of conservation actions while allowing for near real-time adaptive management. The report can be easily customized for any of the thousands of wildlife refuges or regional areas of interest in the United States, emphasizing the broad application of an animal movement data stream. Utilizing diverse, extensive telemetry data streams through scientific collaboration can aid managers and conservation stakeholders with short and long-term research and conservation planning and help address a cadre of issues from local-scale habitat management to improving the understanding of landscape level impacts like drought, wildfire, and climate change on wildlife populations.
Display omitted
•Our Automated Interactive Monitoring System (AIMS) for Wildlife utilizes animal GPS data.•We developed proof-of-concept Customized Wildlife Reports (CWRs) with 11 million locations.•CWRs inform wildlife managers’ decision-making in near real-time.•We conceptualize a multi-tool AIMS for Wildlife incorporating remote-sensing data.•Automated delivery of animal movement data will allow for true adaptive management.
Full text
Available for:
GEOZS, IJS, IMTLJ, KILJ, KISLJ, NLZOH, NUK, OILJ, PNG, SAZU, SBCE, SBJE, UILJ, UL, UM, UPCLJ, UPUK, ZAGLJ, ZRSKP
Extensive global estuarine wetland losses have prompted intensive focus on restoration of these habitats. In California, substantial tracts of freshwater, brackish and tidal wetlands have been lost. ...Given the anthropogenic footprint of development and urbanization in this region, wetland restoration must rely on conversion of existing habitat types rather than adding new wetlands. These restorations can cause conflicts among stakeholders and species that win or lose depending on identified restoration priorities.
Suisun Marsh on the San Francisco Bay Estuary is the largest brackish marsh on the US Pacific coast. To understand how conversion of brackish managed wetlands to tidal marsh would impact waterfowl populations and whether future tidal marsh restorations could provide suitable habitat for dabbling ducks, we examined waterfowl wetland use with a robust GPS‐GSM tracking dataset (442,017 locations) from six dabbling duck species (N = 315).
Managed wetlands, which comprise 47% of Suisun Marsh, were consistently and strongly selected by waterfowl over tidal marshes, with use ~98% across seasons and species.
However, while use of tidal marsh (only 14% of Suisun Marsh) was generally <2%, almost half our ducks (~44%) spent some time in this habitat and exhibited strong utilization of pond‐like features. Ponds only comprise ~10% of this habitat but attracted 44% use (~4.5 times greater than availability).
Synthesis and applications. Managed wetlands were vital to dabbling ducks, but losses from conversion of these habitats may be partially mitigated by incorporating pond features that are more attractive to waterfowl, and likely to offer multi‐species benefits, into tidal marsh restoration designs. While waterfowl are presently a common taxon, previously seen calamitous population declines can be avoided through informed ecosystem‐based management that promotes species richness, biodiversity and helps ‘keep common species common’.
Managed wetlands were vital to dabbling ducks, but losses from conversion of these habitats may be partially mitigated by incorporating pond features that are more attractive to waterfowl, and likely to offer multi‐species benefits, into tidal marsh restoration designs. While waterfowl are presently a common taxon, previously seen calamitous population declines can be avoided through informed ecosystem‐based management that promotes species richness, biodiversity and helps ‘keep common species common’.
Full text
Available for:
BFBNIB, FZAB, GIS, IJS, KILJ, NLZOH, NUK, OILJ, SAZU, SBCE, SBMB, UL, UM, UPUK
Introduction
Habitat selection analyses provide a window into the perceived value of habitats by animals and how those perceptions compare with other animals, change across time, or change in ...relation to availability (termed functional responses). Habitat selection analysis and functional responses can be used to develop strategies to avoid habitat limitations, guide habitat management, and set attainable conservation goals. GPS relocations of marked animals are the principal data used in habitat selection analysis. The accuracy and frequency with which tracking devices collect data are increasing and may result in non-stationary point processes that result from latent behaviors previously unidentifiable in sparse data.
Methods
We investigated non-stationary step length distributions and integrated a two-mixture model of animal movement with step selection analysis to identify patterns of activity among four species of co-occurring waterfowl that winter in the Central Valley of California, United States. We evaluated relative strength of selection and compared functional responses across a range of habitat types for two goose and two dabbling duck species.
Results
Goose species (greater white-fronted goose
Anser albifrons
and lesser snow goose
Anser caerulescens caerulescens
) used habitats similarly and displayed similar functional responses with habitat availability. Northern pintail (
Anas acuta
) displayed functional responses for habitats that provided primary food resources and sanctuary from hunting that were more similar to geese than to mallard (
Anas platyrhynchos
), which expressed a more generalist pattern of habitat selection.
Discussion
Our results define conditions where food resource competition between geese and ducks could operate, which indicate that some species may be more impacted than others. Specifically, early season food limitation may manifest more strongly in snow geese due to longer movements and stronger functional response with rice availability. Late season limitations may manifest in northern pintail, which remain reliant on rice later but may not be reflected in habitat selection patterns due to a consistent functional response with rice availability. We show that multiple movement processes present in high-resolution data can be used to obtain a variety of information about animal behavior and that subsequent step selection analyses may demonstrate unique functional responses relative to alternate habitat selection methods that warrant additional investigation.
Spatio-temporal patterns of movement can characterize relationships between organisms and their surroundings, and address gaps in our understanding of species ecology, activity budgets, ...bioenergetics, and habitat resource management. Highly mobile waterfowl, which can exploit resources over large spatial extents, are excellent models to understand relationships between movements and resource usage, landscape interactions and specific habitat needs.
We tracked 3 species of dabbling ducks with GPS-GSM transmitters in 2015-17 to examine fine-scale movement patterns over 24 h periods (30 min interval), dividing movement pathways into temporally continuous segments and spatially contiguous patches. We quantified distances moved, area used and time allocated across the day, using linear and generalized linear mixed models. We investigated behavior through relationships between these variables.
Movements and space-use were small, and varied by species, sex and season. Gadwall (
) generally moved least (FFDs: 0.5-0.7 km), but their larger foraging patches resulted from longer within-area movements. Pintails (
) moved most, were more likely to conduct flights > 300 m, had FFDs of 0.8-1.1 km, used more segments and patches per day that they revisited more frequently, resulting in the longest daily total movements. Females and males differed only during the post-hunt season when females moved more. 23.6% of track segments were short duration (1-2 locations), approximately 1/3 more than would be expected if they occurred randomly, and were more dispersed in the landscape than longer segments. Distance moved in 30 min shortened as segment duration increased, likely reflecting phases of non-movement captured within segments.
Pacific Flyway ducks spend the majority of time using smaller foraging and resting areas than expected or previously reported, implying that foraging areas may be highly localized, and nutrients obtainable from smaller areas. Additionally, movement reductions over time demonstrates behavioral adjustments that represent divergent energetic demands, the detection of which is a key advantage of higher frequency data. Ducks likely use less energy for movement than currently predicted and management, including distribution and configuration of essential habitat, may require reconsideration. Our study illustrates how fine-scale movement data from tracking help understand and inform various other fields of research.
Environmental contamination is widespread and can negatively impact wildlife health. Some contaminants, including heavy metals, have immunosuppressive effects, but prior studies have rarely measured ...contamination and disease simultaneously, which limits our understanding of how contaminants and pathogens interact to influence wildlife health. Here, we measured mercury concentrations, influenza infection, influenza antibodies and body condition in 749 individuals from 11 species of wild ducks overwintering in California. We found that the odds of prior influenza infection increased more than fivefold across the observed range of blood mercury concentrations, while accounting for species, age, sex and date. Influenza infection prevalence was also higher in species with higher average mercury concentrations. We detected no relationship between influenza infection and body fat content. This positive relationship between influenza prevalence and mercury concentrations in migratory waterfowl suggests that immunotoxic effects of mercury contamination could promote the spread of avian influenza along migratory flyways, especially if influenza has minimal effects on bird health and mobility. More generally, these results show that the effects of environmental contamination could extend beyond the geographical area of contamination itself by altering the prevalence of infectious diseases in highly mobile hosts.
Management actions to protect endangered species and conserve ecosystem function may not always be in precise alignment. Efforts to recover the California Ridgway’s Rail (Rallus obsoletus obsoletus; ...hereafter, California rail), a federally and state-listed species, and restoration of tidal marsh ecosystems in the San Francisco Bay estuary provide a prime example of habitat restoration that has conflicted with species conservation. On the brink of extinction from habitat loss and degradation, and non-native predators in the 1990s, California rail populations responded positively to introduction of a non-native plant, Atlantic cordgrass (Spartina alterniflora). California rail populations were in substantial decline when the non-nativeSpartinawas initially introduced as part of efforts to recover tidal marshes. Subsequent hybridization with the native Pacific cordgrass (Spartina foliosa) boosted California rail populations by providing greater cover and increased habitat area. The hybrid cordgrass (S. alterniflora × S. foliosa) readily invaded tidal mudflats and channels, and both crowded out native tidal marsh plants and increased sediment accretion in the marsh plain. This resulted in modification of tidal marsh geomorphology, hydrology, productivity, and species composition. Our results show that denser California rail populations occur in invasiveSpartinathan in nativeSpartinain San Francisco Bay. Herbicide treatment between 2005 and 2012 removed invasiveSpartinafrom open intertidal mud and preserved foraging habitat for shorebirds. However, removal of invasiveSpartinacaused substantial decreases in California rail populations. Unknown facets of California rail ecology, undesirable interim stages of tidal marsh restoration, and competing management objectives among stakeholders resulted in management planning for endangered species or ecosystem restoration that favored one goal over the other. We have examined this perceived conflict and propose strategies for moderating harmful effects of restoration while meeting the needs of both endangered species and the imperiled native marsh ecosystem.
PDF
