A comparative study on climate change and its impacts on coastal aquifers is performed for three Mediterranean areas. Common climate scenarios are developed for these areas using the ENSEMBLES ...projections that consider the A1b scenario. Temperature and precipitation data of three climate models are bias corrected with two different methods for a historic reference period, after which scenarios are created for 2020–2050 and 2069–2099 and used to calculate aquifer recharge for these periods based on two soil water budget methods. These multiple combinations of models and methods allow incorporating a level of uncertainty into the results. Groundwater flow models are developed for the three sites and then used to integrate future scenarios for three different parameters: (1) recharge, (2) crop water demand, and (3) sea level rise. Short-term predictions are marked by large ranges of predicted changes in recharge, only showing a consistent decrease at the Spanish site (mean 23 %), particularly due to a reduction in autumn rainfall. The latter is also expected to occur at the Portuguese site, resulting in a longer dry period. More frequent droughts are predicted at the Portuguese and Moroccan sites, but cannot be proven for the Spanish site. Toward the end of the century, results indicate a significant decrease (mean >25 %) in recharge in all areas, though most pronounced at the Portuguese site in absolute terms (mean 134 mm/year) and the Moroccan site in relative terms (mean 47 %). The models further predict a steady increase in crop water demand, causing 15–20 % additional evapotranspiration until 2100. Scenario modeling of groundwater flow shows its response to the predicted decreases in recharge and increases in pumping rates, with strongly reduced outflow into the coastal wetlands, whereas changes due to sea level rise are negligible.
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EMUNI, FIS, FZAB, GEOZS, GIS, IJS, IMTLJ, KILJ, KISLJ, MFDPS, NLZOH, NUK, OBVAL, OILJ, PNG, SAZU, SBCE, SBJE, SBMB, SBNM, UKNU, UL, UM, UPUK, VKSCE, ZAGLJ
We examined the variation of stygofauna composition collected in wells, along a gradient in groundwater salinity/conductivity in a coastal aquifer from southern Portugal. The studied coastal aquifer ...is considered vulnerable to salinization due to seawater intrusion, caused by overexploitation of the aquifer. Knowing the response of the stygofauna species to present levels of groundwater salinity makes it possible to understand and measure the effects of saltwater intrusion on stygofauna, rendering them potential bioindicators of this environmental pressure. Biotic and abiotic sampling was conducted in six shallow wells located in the fresh-saltwater interface of the Arade estuary along the salinity gradient established in the groundwater from the estuary to inland locations (microSiemens/cm). Groundwater salinity was highly correlated with taxa distribution. The stygobites Eucyclops hadjebensis and Acanthocyclops sensitivus, the cosmopolitan Megacyclops viridis and Cypria ophtalmica were particularly associated with low-salinity conditions, whereas Eucyclops graeteri, Megacyclops brachypus and Daphnia pulicaria were related to high-salinity waters. Multivariate analyses indicated that stygofauna assemblages varied significantly with location. We suggest that stygofauna composition and structure can be a useful complementing tool for monitoring seawater intrusion into coastal aquifers, where reduction or deterioration in groundwater resources is predicted.
Communities located in the interface between marine/brackish and freshwater habitats are likely to be early responders to climatic changes as they are exposed to both saline and freshwater ...conditions, and thus are expected to be sensitive to any change in their environmental conditions. Climatic effects are predicted to reduce the availability of groundwater, altering the hydrological balance on estuarine-aquifer interfaces. Here, we aimed to characterise the estuarine faunal community along a gradient dependent on groundwater input, under a predicted climatic scenario of reduction in groundwater discharge into the estuary. Sediment macrofauna was sampled along a salinity gradient following both the wet and dry seasons in 2009. Results indicated that species abundance varied significantly with the salinity gradient created by the groundwater discharge into the estuarine habitat and with sampling time. The isopode
Cyathura carinata (Krøyer, 1847) and the polychaetes
Heteromastus filiformis (Claparède, 1864) and
Hediste diversicolor O.F. Muller, 1776 were associated with the more saline locations, while oligochaeta and Spionidae were more abundant in areas of lower salinity. The polychaete
Alkmaria romijni Horst, 1919 was the dominant species and ubiquitous throughout sampling stations. This study provides evidence for estuarine fauna to be considered as a potentially valuable indicator of variation in the input of groundwater into marine-freshwater interface habitats, expected from climatic pressures on aquifer levels, condition and recharge rates. For instance, a reduction in the abundance of some polychaete species, found here to be more abundant in freshwater conditions, and increasing Oligochaeta found here on higher salinities, can potentially be early warnings of a reduction in the input of groundwater into estuaries. Estuarine benthic species are often the main prey for commercially important fish predators such as in our case study, making it important to monitor the aquatic habitat interfaces taking into consideration the estuarine macrobenthos and groundwater availability in the system.
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GEOZS, IJS, IMTLJ, KILJ, KISLJ, NUK, OILJ, PNG, SAZU, SBCE, SBJE, UL, UM, UPCLJ, UPUK
The importance of rainbow trout (Onchorhynchus mykiss) in Iran aquaculture industry on one hand, and increasing the mortality of this fish due to outbreaks of infectious diseases, on the other hand, ...indicate the requirement for more profound understanding the rainbow trout immune system and access to laboratory tools for definitive diagnosis of its diseases. One of the most important defense mechanisms of vertebrates including fish is the production of immunoglobulin against microbial pathogens. In rainbow trout, dominant immunoglobulin in serum is immunoglobulin M (IgM). The purpose of this study was the cloning and expression of the constant region of rainbow trout IgM heavy chain (µ chain) gene in Escherichia coli. Therefore, RNA of the targeted gene was extracted from spleen and head kidney of rainbow trout and the constant region of µ chain was amplified by RT-PCR. The amplified fragment was ligated to pMALc2x vector and transferred to DH5α strain of E. coli. Recombinant vector transformed and expressed into E. coli Rosetta strain. SDS-PAGE analysis indicated the production of a recombinant protein with an expected molecular weight of 75 KDa. Thereafter, the recombinant protein was purified by amylose resin and its antigenicity was accessed by immunoblotting. Positive reaction of the expressed protein with anti-trout serum indicated that the expressed constant region of trout µ chain possess antigenic epitopes and could be applied in future immunological studies.
Infectious Pancreatic Necrosis Virus (IPNV) is a member of the family Birnaviridae that has been linked to high mortalities in salmonids. Bacterial based systems as live vectors for the delivery of ...heterologous antigens offer a number of advantages as vaccination strategies. VP2 is a structural viral protein of IPNV with immunogenicity effects. In this study IPNV was isolated from diseased fry of rainbow trout Oncorhynchus mykiss (Walbaum) using CHSE-214. Then an expression vector was constructed for expression of viral protein VP2. The designed vector was constructed based upon pET-26b (+) with T7 promoter. A fragment containing the full length of the VP2 gene of Iranian Sp strain was amplified by PCR using genomic RNA of IPNV as template and cloned inpET-26b(+) plasmid. Recombinant structural viral protein VP2 was expressed as a soluble, N-terminal PelB fusion protein and secreted into the periplasmic space of Escherichia coli BL21(DE3) and Rosetta (DE3). The glucose, Isopropyl- beta -D- thiogalactopyranoside (IPTG) was used as a chemical inducer for rVP2 production in 37 degree C. The rVP2 was extracted from the periplasm by osmotic shock treatment. The presence of gene in bacterial system of E. coli was confirmed by gel electrophoresis technique. The constructed vector could efficiently express the rVP2 into the periplasmic space of E. coli. The successful cloning and expression of the structural viral protein gene into E. coli can be used for developing a useful and safe vaccine to control IPNV infection in Iranian fish industry.
The envelope glycoprotein (protein G) of bovine ephemeral fever virus (BEFV) has been identified as a plausible vaccine candidate against the BEF disease. In the present study, G1 epitope of the G ...gly-coprotein gene was cloned in an eukaryotic expression vector, pcDNA3.1(+), under the control of the human cytomegalovirus (CMV) promoter. The pcDNA3.1-G1 construct was transfected into human embryonic kidney 293 (HEK 293) cell line and the expression efficiency was verified by immunofluorescence staining of transfected cells and Western blot analysis. The results indicated that G1 protein was expressed by the recombinant pcDNA3.1-G1 construct in the transfected cells. The recombinant plasmid constructed in this study can be used as a DNA vaccine to evaluate its potential for immunogenicity and protection against BEF virus in animal models.
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IZUM, KILJ, NUK, PILJ, PNG, SAZU, UL, UM, UPUK
Coccidiosis is an intestinal disease of chickens caused by various species of protozoan parasites within the genus Eimeria. Diagnosis and genetic characterization of different species of Eimeria are ...central to the prevention, surveillance, and control of coccidiosis. The aim of this study was to detect different chicken Eimeria species from several areas in Khuzestan, southwest Iran.
From February to September 2008, PCR assay as well as parasitological examinations was applied for the identification of field isolates of Eimeria parasites around Ahvaz, center of Khuzestan, southwest Iran. Data were analyzed by the Kappa statistic test.
Eimeria maxima, E. necatrix, E. tenella, E. acervulina and E. mitis were detected in this study. The prevalence of Eimeria spp. was 31.5% (126 of 400) and E. tenella was the most prevalent species in Khuzestan. Based on the Kappa statistical test, a good correlation between the results of PCR and traditional biometrical methods was only observed for E. maxima.
The present study is the first on the prevalence of Eimeria species in Khuzestan, based on the molecular findings. We believe that traditional methods are not sufficiently reliable for specific diagnosis of Eimeria species in chickens and PCR based amplification of DNA sequence of parasite, could resolve this problem.
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IZUM, KILJ, NUK, PILJ, PNG, SAZU, UL, UM, UPUK
The cycling behavior of a zinc/polystyrene composite electrode in the ionic liquid 1-butyl-1-methylpyrrolidinium trifluoromethylsulfonate (Py
1,4
TfO) was studied at room temperature. A brass ...substrate covered by polystyrene spheres was used to produce a zinc composite electrode. The obtained electrode was investigated using various techniques like potentiostatic and galvanostatic deposition/stripping cycles, scanning electron microscopy (SEM), and energy dispersive x-ray spectroscopy (EDX). The effect of a uniaxial mechanical pressure on adhesion and cycling behavior was also investigated. The results show that zinc grows uniformly within the voids of the polystyrene structures with no hints of dendritic growth. Such a composite material is interesting as electrode material for zinc-based batteries.
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EMUNI, FIS, FZAB, GEOZS, GIS, IJS, IMTLJ, KILJ, KISLJ, MFDPS, NLZOH, NUK, OILJ, PNG, SAZU, SBCE, SBJE, SBMB, SBNM, UKNU, UL, UM, UPUK, VKSCE, ZAGLJ
Infectious Pancreatic Necrosis Virus (IPNV) is the causal agent of a highly contagious disease that affects many species of fish and shellfish. This virus causes economically important diseases of ...farmed rainbow trout, Oncorhynchus mykiss, in Iran which is often associated with the transmission of pathogens from European resources. In this study, moribund rainbow trout fry were collected during an outbreak of IPNV in three different fish farms in one northern province (Mazandaran), and two west provinces (Chaharmahal and Bakhtiari, and Kohgiluyeh and Boyer Ahmad) of Iran. We investigated full genome sequence of Iranian IPNV and compared it with previously identified IPNV sequences. The sequences of different structural and non-structural protein genes were compared with other aquatic birnaviruses sequenced to date. Our results showed that the Iranian isolate fall within genogroup 5, serotype A2 strain SP, having 99 % identity with the strain 1146 from Spain. These results suggest that the Iranian isolate may have originated from Europe.
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