The phylum Echinodermata comprising the classes Asteroidea, Ophiuroidea, Echinoidea, Holothuroidea, and Crinodeia, is one of the important invertebrate groups. Members of this phylum live exclusively ...in marine habitats and are distributed in almost all depths and latitudes. Some of them, such as sea urchins and sea cucumbers, are commercially valuable and constitute a major fishery resource. Echinoderms are increasingly recognized as a unique source of various metabolites with a wide range of biological activities. The importance of dietary polyunsaturated fatty acids, such as eicosapentaenoic acid, in human health has drawn attention to echinoderms as a promising source of essential fatty acids (FAs). Extensive information on the FAs of the phylum has been accumulated to date. The biosynthetic capabilities and feeding habits of echinoderms explain the findings of the unusual FAs in them. Certain common and unusual FAs may serve as chemotaxonomic markers of the classes. The main goal of the review was to gather the relevant information on the distribution of FAs among the echinoderm classes, describe the structures, distribution, biosynthetic pathways, and bioactivity, with an emphasis on the FAs specific for echinoderms. A large part of the review is devoted to the FAs derived from echinoderms that exhibit various biological activities promising for potential therapeutic applications.
Abstract
We have developed a model atom for Cu with which we perform statistical equilibrium computations that allow us to compute the line formation of Cu i lines in stellar atmospheres without ...assuming local thermodynamic equilibrium (LTE). We validate this model atom by reproducing the observed line profiles of the Sun, Procyon and 11 metal-poor stars. Our sample of stars includes both dwarfs and giants. Over a wide range of stellar parameters, we obtain excellent agreement among different Cu i lines. The 11 metal-poor stars have iron abundances in the range − 4.2 ≤ Fe/H ≤ -1.4, the weighted mean of the Cu/Fe ratios is −0.22 dex, with a scatter of −0.15 dex. This is very different from the results from LTE analysis (the difference between NLTE and LTE abundances reaches 1 dex) and in spite of the small size of our sample, it prompts for a revision of the Galactic evolution of Cu.
Early social deprivation (i.e., an insufficiency or lack of parental care) has been identified as a significant adverse early experience that may affect multiple facets of child development and cause ...long-term outcomes in physical and mental health, cognition and behavior. Current research provides growing evidence that epigenetic reprogramming may be a mechanism modulating these effects of early adversities. This work aimed to investigate the impact of early institutionalization-the immersion in an extreme socially depriving environment in humans-on the epigenome and adaptive behavior of young children up to 4 years of age. We conducted a cross-sectional study involving two comparison groups: 29 children raised in orphanages and 29 children raised in biological families. Genome-wide DNA methylation profiles of blood cells were obtained using the Illumina MethylationEPIC array; the level of child adaptive functioning was assessed using the Vineland Adaptive Behavior Scales-II. In comparison to children raised in families, children residing in orphanages had both statistically significant deficits in multiple adaptive behavior domains and statistically significant differences in DNA methylation states. Moreover, some of these methylation states may directly modulate the behavioral deficits; according to preliminary estimates, about 7-14% of the deviation of adaptive behavior between groups of children may be determined by their difference in DNA methylation profiles. The duration of institutionalization had a significant impact on both the adaptive level and DNA methylation status of institutionalized children.
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DOBA, IZUM, KILJ, NUK, PILJ, PNG, SAZU, SIK, UILJ, UKNU, UL, UM, UPUK
The discovery of symbiotic associations extends our understanding of the biological diversity in the aquatic environment and their impact on the host's ecology. Of particular interest are nudibranchs ...that unprotected by a shell and feed mainly on sponges. The symbiotic association of the nudibranch Rostanga alisae with bacteria was supported by ample evidence, including an analysis of cloned bacterial 16S rRNA genes and a fluorescent in situ hybridization analysis, and microscopic observations. A total of 74 clones belonging to the phyla α-, β-, γ-Proteobacteria, Actinobacteria, and Cyanobacteria were identified. FISH confirmed that bacteriocytes were packed with Bradyrhizobium, Maritalea, Labrenzia, Bulkholderia, Achromobacter, and Stenotrophomonas mainly in the foot and notum epidermis, and also an abundance of Synechococcus cyanobacteria in the intestinal epithelium. An ultrastructural analysis showed several bacterial morphotypes of bacteria in epidermal cells, intestine epithelium, and in mucus layer covering the mollusk body. The high proportion of typical bacterial fatty acids in R. alisae indicated that symbiotic bacteria make a substantial contribution to its nutrition. Thus, the nudibranch harbors a high diversity of specific endo- and extracellular bacteria, which previously unknown as symbionts of marine invertebrates that provide the mollusk with essential nutrients. They can provide chemical defense against predators.
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IZUM, KILJ, NUK, PILJ, PNG, SAZU, UL, UM, UPUK
RNA-seq has become a standard technology to quantify mRNA. The measured values usually vary by several orders of magnitude, and while the detection of differences at high values is statistically well ...grounded, the significance of the differences for rare mRNAs can be weakened by the presence of biological and technical noise. We have developed a method for cleaning RNA-seq data, which improves the detection of differentially expressed genes and specifically genes with low to moderate transcription. Using a data modeling approach, parameters of randomly distributed mRNA counts are identified and reads, most probably originating from technical noise, are removed. We demonstrate that the removal of this random component leads to the significant increase in the number of detected differentially expressed genes, more significant pvalues and no bias towards low-count genes. Application of RNAdeNoise to our RNA-seq data on polysome profiling and several published RNA-seq datasets reveals its suitability for different organisms and sequencing technologies such as Illumina and BGI, shows improved detection of differentially expressed genes, and excludes the subjective setting of thresholds for minimal RNA counts. The program, RNA-seq data, resulted gene lists and examples of use are in the supplementary data and at https://github.com/Deyneko/RNAdeNoise.
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DOBA, IZUM, KILJ, NUK, PILJ, PNG, SAZU, SIK, UILJ, UKNU, UL, UM, UPUK
In the current study, we have succeeded to fabricate Co2FeSi Heusler alloy glass-covered microwires with magnetic core nucleus diameter d = 4.36 µm and total diameter D = 17.55 µm, with high Curie ...temperature (Tc>1100 K) and well-defined magnetic anisotropy for high temperature spintronic devices application. The magnetic properties of as-prepared and annealed at different temperature (873 K, 973 K and 1073 K for 1 h) of Co2FeSi Heusler alloy glass-covered microwires have been investigated. Strong dependence of the magnetic properties on the annealing conditions has been indicated. Anomalous magnetic behavior for annealed samples at 873 K and 973 K has been found and structural properties of such samples have been analyzed. Critical temperatures 155 K and 250 K have been detected for annealed samples at 873 K and 973 K, respectively, where the behavior of M-H loops and coercivity changed. Below the critical point the M-H curve shows “kink or wasp-waisted” magnetic behavior and complex magnetic reversal mechanism is supposed. The anomalous magnetic behavior is due to the martensitic phases induced by annealing conditions below the room temperature. This unusual magnetization behavior provides opportunities to understand the phenomena of different types of magnetic domain structures in the preferred crystallographically oriented Co2FeSi Heusler alloy glass-coated micro-wires, essentially helpful for designing the devices based on magnetization switching.
•Production of Co2FeSi Heusler alloy glass-coated microwires with high Curie temperature.•Strong dependence of the magnetic properties Co2FeSi Heusler alloy glass-coated microwires on the annealing conditions.•Anomalous magnetic behavior below the room temperature for Co2FeSi glass-coated microwires annealed at 873 K and 973 K.•Critical temperatures where changes in the magnetic and structure phases appear were detected for annealed samples.•Suitability of Co2FeSi microwires for the design of devices based on magnetization switching.
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GEOZS, IJS, IMTLJ, KILJ, KISLJ, NLZOH, NUK, OILJ, PNG, SAZU, SBCE, SBJE, UILJ, UL, UM, UPCLJ, UPUK, ZAGLJ, ZRSKP
Processing by Joule-heating the Co67Fe3.9Ni1.5B11.5Si14.5Mo1.6 glass-coated microwire allows considerable improvement of magnetic softness and giant magnetoimpedance (GMI) effect. At optimal joule ...heating conditions we observed GMI ratio up to 650%. Observed magnetic softening and GMI ratio improvement have been discussed considering magnetic anisotropy induced by Oersted magnetic field during current annealing, internal stresses relaxation and radial distribution of magnetic anisotropy. The analysis of the GMI ratio as a function of the frequency (10–1000 MHz) opens new lights to understand the distribution of the magnetic anisotropy inside the glass-coated microwire.
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•Remarkable mprovement of GMI effect in Co -rich microwires current-annealing.•Considerable enhancement of magnetic softness in current-annealed Co-rich microwires.•Interpretation of current annealing effect considering internal stresses relaxation and induced anisotropy.•Evaluation of magnetic field dependence of skin depth in as-prepared and current-annealed microwires.
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GEOZS, IJS, IMTLJ, KILJ, KISLJ, NLZOH, NUK, OILJ, PNG, SAZU, SBCE, SBJE, UILJ, UL, UM, UPCLJ, UPUK, ZAGLJ, ZRSKP
There is a pressing need for improving of the high-frequency magneto-impedance effect of cost-effective soft magnetic materials for use in high-performance sensing devices. The impact of the ...stress-annealing on magnetic properties and high frequency impedance of Fe-rich glass-coated microwires was studied. Hysteresis loops of Fe-rich microwires have been considerably affected by stress- annealing. In stress-annealed Fe- rich microwire we obtained drastic decreasing of coercivity and change of character of hysteresis loop from rectangular to linear. By controlling stress-annealing conditions (temperature and time) we achieved drastic increasing (by order of magnitude) of giant magnetoimpedance ratio. Coercivity, remanent magnetization, diagonal and of-diagonal magnetoimpedance effect of Fe-rich microwires can be tuned by stress-annealing conditions: annealing temperature and time. Observed experimental results are discussed considering relaxation of internal stresses, compressive "back-stresses" arising after stress annealing and topological short range ordering.
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IZUM, KILJ, NUK, PILJ, PNG, SAZU, UL, UM, UPUK
We present an overview of the factors affecting soft magnetic properties and giant magnetoimpedance (GMI) effect as well as of post processing tools allowing optimization of magnetic softness and GMI ...effect of thin amorphous wires. Generally low coercivity and high GMI effect have been observed in as-prepared Co-rich microwires. The magnetoelastic anisotropy is one of the most important parameters that determine the magnetic softness and GMI effect of glass-coated microwires. Annealing at adequate conditions can be very effective for manipulation the magnetic properties of amorphous ferromagnetic glass-coated microwires. After annealing of Co-rich we can observe transformation of inclined hysteresis loops to rectangular and coexistence of fast magnetization switching and GMI effect in the same sample. Using stress-annealing, GMI effect of Co-rich microwires can be increased. We demonstrated that the switching field value of microwires can be tailored by annealing in the range from 4 to 200 A/m. Similarly stress-annealing allows induction of transverse magnetic anisotropy and improvement of magnetic softness and GMI effect in amorphous Fe-rich microwires. On the other hand in Fe-rich FeCuNbSiB microwires after appropriate annealing we observed considerable magnetic softening and GMI effect enhancement.
•Trends in optimization of GMI effect in amorphous and nanocrystalline microwires.•Engineering of magnetic properties and GMI effect in as-prepared amorphous microwires.•Magnetic softening of Fe-rich microwires after stress-annealing.•Improvement of GMI effect after stress-annealing of Fe- and Co-rich microwires.•Improvement of GMI effect after nanocrystallization of Fe- -rich microwires.
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GEOZS, IJS, IMTLJ, KILJ, KISLJ, NUK, OILJ, PNG, SAZU, SBCE, SBJE, UL, UM, UPCLJ, UPUK, ZRSKP
The molecular diversity of chemical compounds found in marine animals offers a good chance for the discovery of novel bioactive compounds of unique structures and diverse biological activities. ...Nudibranch mollusks, which are not protected by a shell and produce chemicals for various ecological uses, including defense against predators, have attracted great interest for their lipid composition. Lipid analysis of eight nudibranch species revealed dominant phospholipids, sterols and monoalkyldiacylglycerols. Among polar lipids, 1-alkenyl-2-acyl glycerophospholipids (plasmalogens) and ceramide-aminoethyl phosphonates were found in the mollusks. The fatty acid compositions of the nudibranchs differed greatly from those of other marine gastropods and exhibited a wide diversity: very long chain fatty acids known as demospongic acids, a series of non-methylene-interrupted fatty acids, including unusual 21:2∆7,13, and an abundance of various odd and branched fatty acids typical of bacteria. Symbiotic bacteria revealed in some species of nudibranchs participate presumably in the production of some compounds serving as a chemical defense for the mollusks. The unique fatty acid composition of the nudibranchs is determined by food supply, inherent biosynthetic activities and intracellular symbiotic microorganisms. The potential of nudibranchs as a source of biologically active lipids and fatty acids is also discussed.
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