Long-term and non-standardized migratory bird ringing data can be used in models controlling variation in bird ringing methodology for reliable population trend estimations.
Bird ringing data usually ...cover long periods and might reflect long-term population changes. However, they are mainly derived during non-standardized multi-species catching at numerous sites during the autumn migration period. We searched for the best modelling approach to determine reliable species population dynamics and trend estimation models based on annual multi-species bird ringing data.
We used ringing data from the Slovenian Bird Ringing Scheme and selected data in three steps according to temporal, quantitative, and qualitative data selection. Annual indices were constructed based on two types of denominators, ringing days, and ringing totals, vs. a robust model without a denominator. We ran 20 candidate-generalized additive models describing migrating population dynamics for 15 bird species by combining different data selection approaches and denominators.
We found that the models were species-specific, although the universal model could also be applied to most species. We propose a general model construction approach for population trend assessments from non-standardized bird ringing data. The estimates obtained by this approach were comparable to the overall European population trends derived from breeding survey data.
Bird ringing data from the autumn migration period are a valuable resource for assessing continental scale population trends taking into account the whole population (non-breeders and juveniles included) and even some rare and endangered species, but should be conducted according to standard protocols to ensure reliable statistical inference of population trends.
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The loss of biodiversity is shaping today’s environment. Bird ringing is a citizen science research tool that can determine species population dynamics and trends over a large geographic area. We ...used a 17-year time series to assess population trends of 74 passerine species based on ringing data from autumn migration in Slovenia (south-central Europe). We defined seven guilds of species according to geographic location, ecological, migratory, breeding, and life-history traits. Almost all guilds showed declining trends, except for the group of species of northeastern European origin, which showed a stable trend. The greatest decline was in low-productivity wetland specialists. Forest birds, seed-eaters, and high-productivity species experienced the smallest declines. The general declines in avifauna across a range of life-history and behavioural traits, and across a range of spatial and ecological scales, suggest widespread environmental change in Europe. Our data indicates that recent trends are toward ecosystem homogeneity, with an impoverished avifauna, including a few species that are increasing in abundance. These are the species with higher productivity and flexible behaviour, such as short-distance migrants, that have the greatest chance of prevailing in the recently rapidly changing environment because of their ability to adapt to changes in a timely manner.
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•Integrative approach adopted to explain phylogeny of flat bark beetles.•C. haematodes found to be complex of four taxa incl. C. tulliae and C. muelleri.•American species needs to be ...split into two species: C. clavipes and C. puniceus.•Calabrian clade of C. cinnaberinus deserves subspecies status.•Climatic changes in Pleistocene and Holocene determined distribution of Cucujus beetles.
Recent progress in the taxonomy of flat bark beetles (Cucujidae), specifically, in the genus Cucujus, has revealed great diversity in subtropical Asia, but the seemingly well-known temperate and boreal taxa need further attention because of their conservation status. Here, we used an integrative approach using morphology, DNA, and species distribution modelling to disentangle phylogenetic relations, verify the number of species, and understand the historical biogeography of Palearctic and Nearctic Cucujus beetles, particularly the C. haematodes species group. Species distinctiveness was supported for C. cinnaberinus, but present-day C. haematodes turned out to be a species complex made up of separate lineages in the western, middle and eastern parts of its Palearctic range. Cucujus muelleri was a member of that complex, being sister to Asian C. haematodes. Moreover, C. haematodes caucasicus was found to be phylogenetically closely related to Italian C. tulliae, and both to be sister to European C. haematodes. North American C. clavipes clavipes and C. c. puniceus resulted to be enough divergent to be considered different species. Interestingly, western American C. puniceus turned out to be closely related to the C. haematodes complex, whereas eastern American C. clavipes constituted a separate lineage, being distantly related to both C. puniceus and C. cinnaberinus. These patterns suggest former trans-continental connections among the ancestors of extant flat bark beetle species. Moreover, a divergent lineage of C. cinnaberinus was found in Calabria, which should be regarded at the very least as a subspecies. The ancestor of C. hameatodes group originated in mid-Miocene, and next, ca. 6.2 Mya, a line leading to C. cinnaberinus had split. Speciation of the American lineages occurred during Pliocene (4.4 Mya for C. clavipes and 3.3 Mya for C. puniceus). Species classified as C. haematodes, C. tulliae and C. muelleri, as well as distinct lineages within C. cinnaberinus split during mid Pleistocene (ca. 1.5 Mya). A comparison of species climatic requirements and their present distribution allowed to identify glacial refugia in south-eastern areas of North America (C. clavipes), south-western areas of North America (C. puniceus), and the Mediterranean and Caspian Sea Basins (European Cucujus species), or south-eastern areas of Asia and the foothills of the central Asian mountains (eastern C. haematodes). Subsequent climatic changes in the Holocene forced these beetles to move their ranges northwards along the coasts of the Pacific (C. puniceus) or Atlantic (C. clavipes), north-eastwards to central, northern, and eastern Europe (C. cinnaberinus and European C. haematodes) or Siberia (Asian C. haematodes). The combined use of molecular, morphological and climatic data allows a comprehensive understanding of the phylogenetic relations and past distributions of Cucujus beetles, highlighting the complexity of C. haematodes species group evolution.
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GEOZS, IJS, IMTLJ, KILJ, KISLJ, NLZOH, NUK, OILJ, PNG, SAZU, SBCE, SBJE, UILJ, UL, UM, UPUK, ZAGLJ, ZRSKP
The metabolic performance of ectotherms is expected to be driven by the environment in which they live. Ecologically similar species with contrasting elevation distributions occurring in sympatry at ...mid‐elevations, provide good models for studying how physiological responses to temperature vary as a function of adaptation to different elevations. Under sympatry, at middle elevations, where divergent species ranges overlap, sympatric populations are expected to have similar thermal responses, suggesting similar local acclimation or adaptation, while observed differences would suggest adaptation to each species’ core range. We analysed the metabolic traits of sympatric species pairs from three ectotherm groups: reptiles (Reptilia: Lacertidae), amphibians (Amphibia: Salamandridae) and beetles (Coleoptera: Carabidae), living at different elevations, in order to test how adaptation to different elevations affects metabolic responses to temperature. We experimentally tested the thermal response of respiration rate (RR) and estimated potential metabolic activity (PMA) at three temperature regimes surrounding the groups’ optimal activity body temperatures. RR was relatively similar among groups and showed a positive response to increasing temperature, which was more pronounced in the high‐elevation species of reptiles and beetles. Relative to RR, PMA displayed a stronger and more consistent positive response to increased temperature in all three groups. For all three groups, the average biochemical capacity for metabolism (PMA) was higher in the range‐restricted, high‐elevation species, and this difference increased at higher temperatures in a consistent manner. These results, indicating consistent pattern in three independently evolved animal groups, suggest a ubiquitous adaptive syndrome and represent a novel understanding of the mechanisms shaping spatial biodiversity patterns. Our results also highlight the importance of geographic patterns for the mechanistic understanding of adaptations in physiological traits, including species’ potential to respond/adapt to global climate changes.
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In Slovenia the Ural Owl (Strix uralensis) is on its south-western limit of distribution and belongs to the southern subspecies Strix uralensis macroura. Dark coloured owls are characteristic for ...this subspecies and represent between 5 to 15% of the population. Slovenian breeding population size is estimated at 400 to 700 pairs. The densities of territories ranges between 0.9 to 13.4 territories per 10 km2, and the highest are reached in mountain forests of southern Dinaric region. In the forests with dominant deciduous trees, e.g. Beech (Fagus sylvatica) and Pedinculate Oak (Quercus robur), the breeding densities are significantly higher than in the forests with higher proportion of coniferous trees, e.g. Norway Spruce (Picea abies). The species does not select specific altitude and throughout Slovenia it occurs between 150 and 1600 m a.s.l. The most of the nest found at natural nest-sites were in tree holes or semi-holes (56%) and at the tree stumps (20%). Nest boxes were occupied less frequently in Slovenia with occupancy rate of 29%. At least in mountain regions breeding begins quite late, between 15 March to 21 June. Average clutch size is 3.3 ± 1.0 eggs per nest. About 80% of all nests are successful raising at least one young. The diet shifts significantly between breeding and non-breeding period due to the seasonality in prey availability. According to the biomass the most important prey in breeding period are mice (Muridae), voles (Arvicollidae) and mole (Talpa europaea), but in the non-breeding period voles and dormice (Gliridae) predominate. Large Fat Dormouse (Glis glis) seems to have very important role in the post-breeding period, but not in the breeding period due to its dormancy. As a large forest-dwelling predator the Ural Owl shapes the raptor community in the forest by excluding mezopredator species, as Tawny Owl (Strix aluco), what allows smaller raptors, e.g. Boreal Owl (Aegolius funereus) to expend their ranges to lower elevations. However, this pattern is not general through the whole Ural Owl range since species ecology and morphology could be regionally quite different, therefore ecological studies from different parts of Ural Owl range are needed.
Herpesviruses (HVs) were detected by PCR in the cloacal swabs of 0.76% (4/525) clinically healthy free-living passerine birds from 32 different species captured in mist nets in Slovenia during the ...2014 and 2017 autumn migrations. Herpesviruses were detected in the Eurasian Blackcap (Sylvia atricapilla), the Common Blackbird (Turdus merula), and the Eurasian Blue Tit (Cyanistes caeruleus). Phylogenetic analysis of partial DNA polymerase gene nucleotide sequences of the HV strains showed a distant relationship with other alphaherpesviruses of birds. In the phylogenetic tree, the HVs detected were clustered together with HV detected in Sulphur-crested Cockatoo and Neotropic Cormorants, as well as with known HVs such as gallid HV1, psittacid HV1 and HV2, and passerine HV1. Different sequences of HVs with relatively low identity were detected in our study, suggesting that different HVs were circulating in passerines sampled during the autumn migration in Slovenia.
Birds of prey, owls and falcons are widely used as sentinel species in raptor biomonitoring programmes. A major current challenge is to facilitate large-scale biomonitoring by coordinating ...contaminant monitoring activities and by building capacity across countries. This requires sharing, dissemination and adoption of best practices addressed by the Networking Programme
Research and Monitoring for and with Raptors in Europe
(EURAPMON) and now being advanced by the ongoing international COST Action
European Raptor Biomonitoring Facility
. The present perspective introduces a schematic sampling protocol for contaminant monitoring in raptors. We provide guidance on sample collection with a view to increasing sampling capacity across countries, ensuring appropriate quality of samples and facilitating harmonization of procedures to maximize the reliability, comparability and interoperability of data. The here presented protocol can be used by professionals and volunteers as a standard guide to ensure harmonised sampling methods for contaminant monitoring in raptors.
Several recent studies have demonstrated the great potential for exploiting semiochemicals in ecology and conservation studies. The cerambycid beetle Rosalia alpina represents one of the flagship ...species of saproxylic insect biodiversity in Europe. In recent years its populations appear to have declined substantially, and its range has shrunk considerably as a result of forest management and urbanization. Here, we collected volatile chemicals released by males and females of R. alpina. Analyses of the resulting extracts revealed the presence of a single male-specific compound, identified as a novel alkylated pyrone structure. In field bioassays in Slovenia, traps baited with the synthesized pyrone captured both sexes of R. alpina, indicating that the pyrone functions as an aggregation pheromone. Our results represent the first example of a new structural class of pheromones within the Cerambycidae, and demonstrate that pheromone-baited traps can provide a useful tool for sampling R. alpina. This tool could be particularly useful in the ongoing development of conservation strategies for the iconic but endangered Alpine longicorn.
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Temperature has strong effects on species composition and traits. These effects can differ within and between species groups. Thermoregulation and mobility are traits which can be strongly affected ...by altitudinal distribution. Our aim was to investigate the influence of altitude on the species richness, abundance and composition of species groups with different trophic, thermoregulatory and mobility traits. Carabids (Coleoptera; Carabidae), hoverflies (Diptera: Syrphidae) and birds (Aves: Passeriformes) were counted in three altitudinal belts with a total elevation difference of 700 m (from 300 m to 1000 m a.s.l.) in the same habitat type (non-fragmented temperate montane mixed beech and fir forest). We found that endotherms and more mobile species (i.e. birds) had a smaller turnover than ectotherms (i.e. hoverflies) and less mobile species (i.e. carabids), from which we can predict that the former species will undergo a less extreme shift than the latter in global warming scenarios. Species turnover across the altitudinal gradient increased from birds to hoverflies to carabid beetles. The effect of altitude on phenology was different between the studied ectotherm species groups (carabids and hoverflies). Hoverflies experience a phenological delay of species richness and abundance at higher altitudes in spring, but not at the end of summer, which implies that hoverfly phenology is affected by a change in temperature, while carabid beetle abundance exhibited a delay in phenology in summer at higher altitudes. We suggest that species that are expected to be most affected by climate change, such as ectotherms and species with poor dispersal ability should be prioritised as the best indicators for monitoring and conservation management purposes.
Classical glacial refugia such as the southern European peninsulas were important for species survival during glacial periods and acted as sources of post-glacial colonisation processes. Only ...recently, some studies have provided evidence for glacial refugia north of the southern European peninsulas. In the present study, we combined species distribution models (SDMs) with phylogeographic analyses (using mitochondrial DNA = mtDNA) to investigate if the cold-adapted, stenotopic and flightless ground beetle species, Carabus irregularis, survived the Last Glacial Maximum (LGM) in classical and/or other refugia. SDMs (for both a western European and for a Carpathian subgroup) were calculated with MAXENT on the basis of 645 species records to predict current and past distribution patterns. Two mtDNA loci (CO1 and ND5, concatenated sequence length: 1785 bp) were analyzed from 91 C. irregularis specimens to reconstruct the phylogeography of Central and eastern European populations and to estimate divergence times of the given lineages. Strong intra-specific genetic differentiation (inter-clade ΦST values ranged from 0.92 to 0.99) implied long-term isolation of major clades and subsclades. The high divergence between the nominate subspecies and the Carpathian subspecies C. i. montandoni points to two independent species rather than subspecies (K-2P distance 0.042 ± 0.004; supposed divergence of the maternal lineages dated back 1.6 to 2.5 million years BP) differing not only morphologically but also genetically and ecologically from each other. The SDMs also inferred classical as well as other refugia for C. irregularis, especially north of the Alps, in southeastern Europe and in the Carpathians. The coincidences between the results of both methods confirm the assumption of multiple glacial refugia for the studied species and the usefulness of combining methodological approaches for the understanding of the history of low-dispersal insect species.
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