•Life cycle assessment of low-cost digesters in small-scale farms was performed.•Biogas and digestate replaced liquefied petroleum gas and synthetic fertilizer.•Scenarios previous to low-cost digesters implementation were also considered.•Digesters reduced environmental impacts by up to 80%.•Digesters reduced expenses associated with fuel and fertilizer purchase by 80%. The aim of this study was to assess the environmental benefits of implementing low-cost digesters in small-scale farms in Colombia by using the LCA methodology. Four scenarios were taken into account considering two small-scale farms located in different areas: two (previous) scenarios where manure was stored in a manure pit and liquefied petroleum gas (LPG) was used for cooking; and two (current) scenarios where manure is treated in low-cost digesters, the digestate replaces the synthetic fertiliser and the biogas is used for cooking replacing the LPG. Results showed that digesters implementation considerably reduced (by up to 80%) potential environmental impacts associated with manure handling, fuel and fertiliser use in the small-scale Colombian farms. This was mainly due to the reduction of LPG and synthetic fertiliser use which were replaced by biogas and digestate. An economic assessment showed that low-cost digesters reduced expenses associated with cooking fuel and fertiliser purchase by 80%.