Over the past decade, about 50 potential energy surfaces (PESs) for polyatomics with 4-11 atoms and for clusters have been calculated using the permutationally invariant polynomial method. This is a ...general, mainly linear least-squares method for precise mathematical fitting of tens of thousands of electronic energies for reactive and nonreactive systems. A brief tutorial of the methodology is given, including several recent improvements. Recent applications to the formic acid dimer (the current record holder in size for a reactive system), the H
2
-H
2
O complex, and four protonated water clusters H
+
(H
2
O)
n
=2,3,4,6
are given. The last application also illustrates extension to large clusters using the many-body representation.
In this context, the recent report1 of an approximately 70-solar-mass (M®) black hole in the galactic binary system LB-1 challenges conventional theories of massive-star evolution, stellar winds and ...core-collapse supernovae, thus requiring a more exotic scenario to explain the existence and properties of this system2,3. ...we used a barycentre method as well as a bisector method using an identical mask as that in Liu et al.1, to estimate the apparent radial-velocity shift resulting from the combined Ha profile, obtaining similar results using both methods. ...there is no evidence for a large mass ratio, and hence also no evidence for a large absolute mass of a black hole. Data availability The data that support the plots within this paper and other findings of this study are available from the corresponding author upon reasonable request. https://doi.org/10.1038/s41586-020-2216-x Received: 6 December 2019 Accepted: 27 February 2020 Published online: 29 April 2020 Acknowledgements We acknowledge support from the Fonds Wetenschappelijk Onderzoek (FWO, Research Foundation Flanders) under project IDs G0F8H6N, G0B3818N, 12ZY520N, G0H5416N and GST-D6267-I002519N, and from the Onderzoeksraad (Research Council), KU Leuven under project IDs C16/17/007, C16/18/005 and C14/17/082.
Motivated by the urgent need to understand how water stress-induced embolism limits the survival and recovery of plants during drought, the linkage between water-stress tolerance and xylem cavitation ...resistance was examined in one of the world's most drought resistant conifer genera, Callitris. Four species were subjected to drought treatments of -5, -8 and -10 MPa for a period of 3-4 wk, after which plants were rewatered. Transpiration, basal growth and leaf water potential were monitored during and after drought. Lethal water potential was correlated with the tension producing a 50% loss of stem hydraulic conductivity. The most resilient species suffered minimal embolism and recovered gas exchange within days of rewatering from -10 MPa, while the most sensitive species suffered major embolism and recovered very slowly. The rate of repair of water transport in the latter case was equal to the rate of basal area growth, indicating xylem reiteration as the primary means of hydraulic repair. The survival of, and recovery from, water stress in Callitris are accurately predicted by the physiology of the stem water-transport system. As the only apparent means of xylem repair after embolism, basal area growth is a critical part of this equation.
ABSTRACT We present an open-source Thermochemical Equilibrium Abundances (TEA) code that calculates the abundances of gaseous molecular species. The code is based on the methodology of White et al. ...and Eriksson. It applies Gibbs free-energy minimization using an iterative, Lagrangian optimization scheme. Given elemental abundances, TEA calculates molecular abundances for a particular temperature and pressure or a list of temperature-pressure pairs. We tested the code against the method of Burrows & Sharp, the free thermochemical equilibrium code Chemical Equilibrium with Applications (CEA), and the example given by Burrows & Sharp. Using their thermodynamic data, TEA reproduces their final abundances, but with higher precision. We also applied the TEA abundance calculations to models of several hot-Jupiter exoplanets, producing expected results. TEA is written in Python in a modular format. There is a start guide, a user manual, and a code document in addition to this theory paper. TEA is available under a reproducible-research, open-source license via https://github.com/dzesmin/TEA.
Ecology Letters (2012) 15: 748–758
Forest and savanna biomes dominate the tropics, yet factors controlling their distribution remain poorly understood. Climate is clearly important, but extensive ...savannas in some high rainfall areas suggest a decoupling of climate and vegetation. In some situations edaphic factors are important, with forest often associated with high nutrient availability. Fire also plays a key role in limiting forest, with fire exclusion often causing a switch from savanna to forest. These observations can be captured by a broad conceptual model with two components: (1) forest and savanna are alternative stable states, maintained by tree cover‐fire feedbacks, (2) the interaction between tree growth rates and fire frequency limits forest development; any factor that increases growth (e.g. elevated availability of water, nutrients, CO2), or decreases fire frequency, will favour canopy closure. This model is consistent with the range of environmental variables correlated with forest distribution, and with the current trend of forest expansion, likely driven by increasing CO2 concentrations. Resolving the drivers of forest and savanna distribution has moved beyond simple correlative studies that are unlikely to establish ultimate causation. Experiments using Dynamic Global Vegetation Models, parameterised with measurements from each continent, provide an important tool for understanding the controls of these systems.
The vibrational strong coupling (VSC) between molecular vibrations and cavity photon modes has recently emerged as a promising tool for influencing chemical reactivities. Despite numerous ...experimental and theoretical efforts, the underlying mechanism of VSC effects remains elusive. In this study, we combine state-of-art quantum cavity vibrational self-consistent field/configuration interaction theory (cav-VSCF/VCI), quasi-classical trajectory method, along with the quantum-chemical CCSD(T)-level machine learning potential, to simulate the hydrogen bond dissociation dynamics of water dimer under VSC. We observe that manipulating the light-matter coupling strength and cavity frequencies can either inhibit or accelerate the dissociation rate. Furthermore, we discover that the cavity surprisingly modifies the vibrational dissociation channels, with a pathway involving both water fragments in their ground vibrational states becoming the major channel, which is a minor one when the water dimer is outside the cavity. We elucidate the mechanisms behind these effects by investigating the critical role of the optical cavity in modifying the intramolecular and intermolecular coupling patterns. While our work focuses on single water dimer system, it provides direct and statistically significant evidence of VSC effects on molecular reaction dynamics.
Background: Forest, grassland peat fires release approximately 2 petagrams of carbon into the atmosphere each year, influencing weather, climate, and air quality. Objective: We estimated the annual ...global mortality attributable to landscape fire smoke (LFS). Methods: Daily and annual exposure to particulate matter < 2.5 pm in aerodynamic diameter (PM₂.₅) from fire emissions was estimated globally for 1997 through 2006 by combining outputs from a chemical transport model with satellite-based observations of aerosol optical depth. In World Health Organization (WHO) subregions classified as sporadically affected, the daily burden of mortality was estimated using previously published concentration—response coefficients for the association between short-term elevations in PM₂.₅ from LFS (contrasted with 0 ug/m³ from LFS) and all-cause mortality. In subregions classified as chronically affected, the annual burden of mortality was estimated using the American Cancer Society study coefficient for the association between longterm PM₂.₅ exposure and all-cause mortality. The annual average PM₂.₅ estimates were contrasted with theoretical minimum (counterfactual) concentrations in each chronically affected subregion.Sensitivity of mortality estimates to different exposure assessments, counterfactual estimates, and concentration—response functions was evaluated. Strong La Niña and El Niño years were compared to assess the influence of interannual climatic variability. Results: Our principal estimate for the average mortality attributable to LFS exposure was 339,000 deaths annually. In sensitivity analyses the interquartile range of all tested estimates was 260,000-600,000. The regions most affected were sub-Saharan Africa (157,000) and Southeast Asia (110,000). Estimated annual mortality during La Niña was 262,000, compared with 532,000 during El Niño. Conclusions: Fire emissions are an important contributor to global mortality. Adverse health outcomes associated with LFS could be substantially reduced by curtailing burning of tropical rainforests, which rarely burn naturally. The large estimated influence of El Niño suggests a relationship between climate and the burden of mortality attributable to LFS.
Context. The intriguing binary LS V +22 25 (LB-1) has drawn much attention following claims of it being a single-lined spectroscopic binary with a 79-day orbit comprising a B-type star and a ≈70 M ⊙ ...black hole – the most massive stellar black hole reported to date. Subsequent studies demonstrated a lack of evidence for a companion of such great mass. Recent analyses have implied that the primary star is a stripped He-rich star with peculiar sub-solar abundances of heavy elements, such as Mg and Fe. However, the nature of the secondary, which was proposed to be a black hole, a neutron star, or a main sequence star, remains unknown. Aims. Based on 26 newly acquired spectroscopic observations secured with the HERMES and FEROS spectrographs covering the orbit of the system, we perform an orbital analysis and spectral disentangling of LB-1 to elucidate the nature of the system. Methods. To derive the radial velocity semi-amplitude K 2 of the secondary and extract the spectra of the two components, we used two independent disentangling methods: the shift-and-add technique and Fourier disentangling with FDBinary. We used atmosphere models to constrain the surface properties and abundances. Results. Our disentangling and spectral analysis shows that LB-1 contains two components of comparable brightness in the optical. The narrow-lined primary, which we estimate to contribute ≈55% in the optical, has spectral properties that suggest that it is a stripped star: it has a small spectroscopic mass (≈1 M ⊙ ) for a B-type star and it is He- and N-rich. Unlike previous reports, the abundances of heavy elements are found to be solar. The “hidden” secondary, which contributes about 45% of the optical flux, is a rapidly rotating ( v sin i ≈ 300 km s −1 ) B3 V star with a decretion disk – a Be star. As a result of its rapid rotation and dilution, the photospheric absorption lines of the secondary are not readily apparent in the individual observations. We measure a semi-amplitude for this star of K 2 = 11.2 ± 1.0 km s −1 and adopting a mass of M 2 = 7 ± 2 M ⊙ typical for B3 V stars, we derive an orbital mass for the stripped primary of M 1 = 1.5 ± 0.4 M ⊙ . The orbital inclination of 39 ± 4° implies a near-critical rotation for the Be secondary ( v eq ≈ 470 km s −1 ). Conclusions. LB-1 does not contain a compact object. Instead, it is a rare Be binary system consisting of a stripped star (the former mass donor) and a Be star rotating at near its critical velocity (the former mass accretor). This system is a clear example that binary interactions play a decisive role in the production of rapid stellar rotators and Be stars.
Capturing roaming molecular fragments in real time Endo, Tomoyuki; Neville, Simon P; Wanie, Vincent ...
Science (American Association for the Advancement of Science),
11/2020, Letnik:
370, Številka:
6520
Journal Article
Recenzirano
Since the discovery of roaming as an alternative molecular dissociation pathway in formaldehyde (H
CO), it has been indirectly observed in numerous molecules. The phenomenon describes a frustrated ...dissociation with fragments roaming at relatively large interatomic distances rather than following conventional transition-state dissociation; incipient radicals from the parent molecule self-react to form molecular products. Roaming has been identified spectroscopically through static product channel-resolved measurements, but not in real-time observations of the roaming fragment itself. Using time-resolved Coulomb explosion imaging (CEI), we directly imaged individual "roamers" on ultrafast time scales in the prototypical formaldehyde dissociation reaction. Using high-level first-principles simulations of all critical experimental steps, distinctive roaming signatures were identified. These were rendered observable by extracting rare stochastic events out of an overwhelming background using the highly sensitive CEI method.