The recycling of iron bearing dusts produced during iron and steel manufacturing processes is vital to the sustainability of these processes; however, contamination of these dusts with zinc increases ...the difficulty to do this. Blast furnace dust, collected by a wet scrubber system, was sampled and characterised to investigate the removal of zinc to produce a treated residue with low zinc content suitable for recycling through the blast furnace.
This paper examines a leaching process for the dust using different organic carboxylic acids, to establish if they were capable of extracting high levels of zinc and low levels of iron. Prop-2-enoic acid was found to be particularly effective, extracting high levels of zinc up to 85.7% and low levels of iron, 8.5%. The paper also discusses the mechanisms of extraction more specifically for organic carboxylic acids and found that the iron extraction was well explained by the variation in pH and the Bronsted–Lowry theory; whereas zinc extraction was well explained by substituent group effects and the Lewis acid/base theory.
The novel use of a non-aqueous solvent with prop-2-enoic acid, to minimise the ion solvating ability and proton dissociation, was found to reduce the level of iron extraction from 8.5% to 0.1% without detrimental effect on zinc extraction when leaching. A range of mineral and carboxylic acids were also tested to investigate and compare the effect of pH and chemical structure on the leaching efficacy.
•Carboxylic acids can give high zinc extraction and low iron extractions.•Iron extraction can be reduced by incorporating a non-aqueous solvent.•Zinc extraction has a lower dependency on the pH compared to iron extraction.•Zinc extraction by carboxylic acids was explained by the Lewis acid/base theory.•Iron extraction by carboxylic acids was explained by the Bronsted–Lowry theory.
Many individuals mount nearly identical antibody responses to SARS-CoV-2. To gain insight into how the viral spike (S) protein receptor-binding domain (RBD) might evolve in response to common ...antibody responses, we studied mutations occurring during virus evolution in a persistently infected immunocompromised individual. We use antibody Fab/RBD structures to predict, and pseudotypes to confirm, that mutations found in late-stage evolved S variants confer resistance to a common class of SARS-CoV-2 neutralizing antibodies we isolated from a healthy COVID-19 convalescent donor. Resistance extends to the polyclonal serum immunoglobulins of four out of four healthy convalescent donors we tested and to monoclonal antibodies in clinical use. We further show that affinity maturation is unimportant for wild-type virus neutralization but is critical to neutralization breadth. Because the mutations we studied foreshadowed emerging variants that are now circulating across the globe, our results have implications to the long-term efficacy of S-directed countermeasures.
Display omitted
•SARS-CoV-2 spike evolves during persistent infection to resist common antibodies•Antibody affinity maturation is critical to neutralization breadth•Intra-host evolution foreshadows mutations in circulating spike variants
Structural and functional analysis of the evolution of SARS-CoV-2 in a persistently infected immunocompromised individual yields insights into mutations that foreshadow emerging viral variants worldwide.
The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic has devastated global public health systems and economies, with over 52 million people infected, millions of jobs and ...businesses lost, and more than 1 million deaths recorded to date. Contact with surfaces contaminated with droplets generated by infected persons through exhaling, talking, coughing and sneezing is a major driver of SARS-CoV-2 transmission, with the virus being able to survive on surfaces for extended periods of time. To interrupt these chains of transmission, there is an urgent need for devices that can be deployed to inactivate the virus on both recently and existing contaminated surfaces. Here, we describe the inactivation of SARS-CoV-2 in both wet and dry format using radiation generated by a commercially available Signify ultraviolet (UV)-C light source at 254 nm. We show that for contaminated surfaces, only seconds of exposure is required for complete inactivation, allowing for easy implementation in decontamination workflows.
Fire is a natural disturbance that exerts an important influence on global ecosystems, affecting vegetation distribution and structure, the carbon cycle and climate. However, human-induced changes to ...fire regimes may affect at-risk species groups such as small mammals. We examine the effect of fire on small mammals and evaluate the relative sensitivity to fire among different groups using a systematic review methodology that included critiquing the literature with respect to survey design and statistical analysis. Overall, small mammal abundance is slightly higher, and demographic parameters more favourable, in unburnt sites compared to burnt sites. This was more pronounced in species with body size range of 101–1000g and with habitat requirements that are sensitive to fire (e.g. dense ground cover): in 66.6 and 69.7% of pairwise comparisons, abundance or a demographic parameter were higher in unburnt than burnt sites. This systematic review demonstrates that there remains a continued focus on simple shifts in abundance with regards to effect of fire and small mammals, which limits understanding of mechanisms responsible for change. Body size and habitat preference were most important in explaining variation in small mammal species’ responses to fire.
Effective intervention strategies are urgently needed to control the COVID-19 pandemic. Human angiotensin-converting enzyme 2 (ACE2) is a membrane-bound carboxypeptidase that forms a dimer and serves ...as the cellular receptor for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). ACE2 is also a key negative regulator of the renin-angiotensin system that modulates vascular functions. We report here the properties of a trimeric ACE2 ectodomain variant, engineered using a structure-based approach. The trimeric ACE2 variant has a binding affinity of ~60 pM for the spike protein of SARS‑CoV‑2 (compared with 77 nM for monomeric ACE2 and 12-22 nM for dimeric ACE2 constructs), and its peptidase activity and the ability to block activation of angiotensin II receptor type 1 in the renin-angiotensin system are preserved. Moreover, the engineered ACE2 potently inhibits SARS‑CoV‑2 infection in cell culture. These results suggest that engineered, trimeric ACE2 may be a promising anti-SARS-CoV-2 agent for treating COVID-19.
•We used simulation models to test the pyrodiversity–biodiversity hypothesis.•Different configurations of fire frequency, intensity and extent were compared.•Fire frequency was more important ...compared to fire extent and intensity.•Current fire regimes may be a risk for small mammal species in northern Australia.
Patch-mosaic burning is a widely accepted practical approach to managing biodiversity, whereby spatial and temporal diversity of fire is manipulated to benefit biotic diversity. We use simulation experiments based on stochastic population viability analysis to evaluate the implications of contrasting patch-mosaic burning scenarios for the population dynamics and risk of decline of four species of small mammals in northern Australia. Our results, based on models developed from detailed mark-recapture data, suggest that fire frequency has more influence on small-mammal persistence than fire extent. Risk of extinction increased for all four species when fire frequency exceeded once every five years. Under current ambient fire regimes most Australia tropical savannas burn more frequently and therefore seem to have unfavourable consequences for this faunal group and risk precipitating severe future declines.
SARS-CoV-2 is a betacoronavirus with a single-stranded, positive-sense, 30-kilobase RNA genome responsible for the ongoing COVID-19 pandemic. Although population average structure models of the ...genome were recently reported, there is little experimental data on native structural ensembles, and most structures lack functional characterization. Here we report secondary structure heterogeneity of the entire SARS-CoV-2 genome in two lines of infected cells at single nucleotide resolution. Our results reveal alternative RNA conformations across the genome and at the critical frameshifting stimulation element (FSE) that are drastically different from prevailing population average models. Importantly, we find that this structural ensemble promotes frameshifting rates much higher than the canonical minimal FSE and similar to ribosome profiling studies. Our results highlight the value of studying RNA in its full length and cellular context. The genomic structures detailed here lay groundwork for coronavirus RNA biology and will guide the design of SARS-CoV-2 RNA-based therapeutics.
The E6 and E7 proteins are the major oncogenic drivers encoded by high-risk human papillomaviruses (HPVs). While many aspects of the transforming activities of these proteins have been extensively ...studied, there are fewer studies that have investigated how HPV E6/E7 expression affects the expression of cellular noncoding RNAs. The goal of our study was to investigate HPV16 E6/E7 modulation of cellular microRNA (miR) levels and to determine the potential consequences for cellular gene expression. We performed deep sequencing of small and large cellular RNAs in primary undifferentiated cultures of human foreskin keratinocytes (HFKs) with stable expression of HPV16 E6/E7 or a control vector. After integration of the two data sets, we identified 51 differentially expressed cellular miRs associated with the modulation of 1,456 potential target mRNAs in HPV16 E6/E7-expressing HFKs. We discovered that the degree of differential miR expression in HFKs expressing HPV16 E6/E7 was not necessarily predictive of the number of corresponding mRNA targets or the potential impact on gene expression. Additional analyses of the identified miR-mRNA pairs suggest modulation of specific biological activities and biochemical pathways. Overall, our study supports the model that perturbation of cellular miR expression by HPV16 E6/E7 importantly contributes to the rewiring of cellular regulatory circuits by the high-risk HPV E6 and E7 proteins that contribute to oncogenic transformation.
High-risk human papillomaviruses (HPVs) are the causative agents of almost all cervical cancers and many other cancers, including anal, vaginal, vulvar, penile, and oropharyngeal cancers. Despite the availability of efficacious HPV vaccines, it is critical to determine how HPVs cause cancer, as many people remain unvaccinated and the vaccine does not prevent cancer development in individuals who are already infected. Two HPV proteins, E6 and E7, are the major drivers of cancer development, and much remains to be learned about how the expression of these viral proteins reprograms infected cells, ultimately resulting in cancer development. Small, noncoding human RNAs, termed microRNAs (miRs), regulate gene expression and have been implicated in almost all human cancers, including HPV-associated cancers. Our study provides a comprehensive analysis of how E6 and E7 alter the expression of human miRs and how this potentially impacts cellular gene expression, which may contribute to cancer development.
•Highly thermally degraded MEA samples still retained some capacity to remove CO2.•Amongst other degradation products, 2-oxazolidone, HEEDA and HEIA were the major.•HEIA was indicated as the most ...stable thermal degradation product.•Corrosion of the stainless steel equipment was observed.
Amine scrubbing is a proven technology in the oil and gas industries. Its use in coal fired power plants is not fully understood and the likelihood of solvent degradation is high. Decreased absorption efficiency, undesirable by-products and the environmental impact of their disposal are the main consequences. In the present study, samples of monoethanolamine were thermally degraded, at 160°C for between 2 and 8 weeks, and their CO2 removal capacity deterioration was determined. The findings show that thermal degradation at 160°C for 8 weeks reduced monoethanolamine concentration by 95%, but the remaining solvent still retained 22% of its capacity to remove CO2, probably due to the capacity of some of the degradation products to remove CO2. Therefore, the requirement for monoethanolamine make-up in operational amine scrubbing systems may not be quite as serious as initially believed. A 20% higher MEA loss was determined in the samples with 0.37 initial CO2 loading (molCO2/molMEA). 2-Oxazolidone, N-(2-hydroxyethyl)-ethylenediamine and 1-(2-hydroxyethyl)-2-imidazolidinone were identified as the major monoethanolamine degradation products, the latter being indicated as the most stable product with concentrations of up to 17% (v/v). Corrosion (1.95mm/year) of the stainless steel (type 316) equipment, used during the experiments, was also observed.
Lean premixed swirl combustion is widely used in gas turbines and many other combustion Processes due to the benefits of good flame stability and blow off limits coupled with low NOx emissions. ...Although flashback is not generally a problem with natural gas combustion, there are some reports of flashback damage with existing gas turbines, whilst hydrogen enriched fuel blends, especially those derived from gasification of coal and/or biomass/industrial processes such as steel making, cause concerns in this area. Thus, this paper describes a practical experimental approach to study and reduce the effect of flashback in a compact design of generic swirl burner representative of many systems. A range of different fuel blends are investigated for flashback and blow off limits; these fuel mixes include methane, methane/hydrogen blends, pure hydrogen and coke oven gas. Swirl number effects are investigated by varying the number of inlets or the configuration of the inlets. The well known Lewis and von Elbe critical boundary velocity gradient expression is used to characterise flashback and enable comparison to be made with other available data.
Two flashback phenomena are encountered here. The first one at lower swirl numbers involves flashback through the outer wall boundary layer where the crucial parameter is the critical boundary velocity gradient, Gf. Values of Gf are of similar magnitude to those reported by Lewis and von Elbe for laminar flow conditions, and it is recognised that under the turbulent flow conditions pertaining here actual gradients in the thin swirl flow boundary layer are much higher than occur under laminar flow conditions. At higher swirl numbers the central recirculation zone (CRZ) becomes enlarged and extends backwards over the fuel injector to the burner baseplate and causes flashback to occur earlier at higher velocities. This extension of the CRZ is complex, being governed by swirl number, equivalence ratio and Reynolds Number. Under these conditions flashback occurs when the cylindrical flame front surrounding the CRZ rapidly accelerates outwards to the tangential inlets and beyond, especially with hydrogen containing fuel mixes. Conversely at lower swirl numbers with a modified exhaust geometry, hence restricted CRZ, flashback occurs through the outer thin boundary layer at much lower flow rates when the hydrogen content of the fuel mix does not exceed 30%. The work demonstrates that it is possible to run premixed swirl burners with a wide range of hydrogen fuel blends so as to substantially minimise flashback behaviour, thus permitting wider used of the technology to reduce NOx emissions.