Atmospheric acidity is increasingly determined by carbon dioxide and organic acids
. Among the latter, formic acid facilitates the nucleation of cloud droplets
and contributes to the acidity of ...clouds and rainwater
. At present, chemistry-climate models greatly underestimate the atmospheric burden of formic acid, because key processes related to its sources and sinks remain poorly understood
. Here we present atmospheric chamber experiments that show that formaldehyde is efficiently converted to gaseous formic acid via a multiphase pathway that involves its hydrated form, methanediol. In warm cloud droplets, methanediol undergoes fast outgassing but slow dehydration. Using a chemistry-climate model, we estimate that the gas-phase oxidation of methanediol produces up to four times more formic acid than all other known chemical sources combined. Our findings reconcile model predictions and measurements of formic acid abundance. The additional formic acid burden increases atmospheric acidity by reducing the pH of clouds and rainwater by up to 0.3. The diol mechanism presented here probably applies to other aldehydes and may help to explain the high atmospheric levels of other organic acids that affect aerosol growth and cloud evolution.
Alkyl nitrates and secondary organic aerosol (SOA) produced during the oxidation of isoprene by nitrate radicals has been observed in the SAPHIR (Simulation of Atmospheric PHotochemistry In a large ...Reaction Chamber) chamber. A 16 h dark experiment was conducted with temperatures at 289–301 K, and maximum concentrations of 11 ppb isoprene, 62.4 ppb O3 and 31.1 ppb NOx. We find the yield of nitrates is 70±8% from the isoprene + NO3 reaction, and the yield for secondary dinitrates produced in the reaction of primary isoprene nitrates with NO3 is 40±20%. We find an effective rate constant for reaction of NO3 with the group of first generation oxidation products to be 7×10−14 molecule−1 cm3 s−1. At the low total organic aerosol concentration in the chamber (max=0.52 μg m−3) we observed a mass yield (ΔSOA mass/Δisoprene mass) of 2% for the entire 16 h experiment. However a comparison of the timing of the observed SOA production to a box model simulation of first and second generation oxidation products shows that the yield from the first generation products was <0.7% while the further oxidation of the initial products leads to a yield of 14% (defined as ΔSOA/Δisoprene2x where Δisoprene2x is the mass of isoprene which reacted twice with NO3). The SOA yield of 14% is consistent with equilibrium partitioning of highly functionalized C5 products of isoprene oxidation.
Recent studies have shown that measured OH under NOx‐limited, high‐isoprene conditions are many times higher than modeled OH. In this study, a detailed analysis of the HOx radical budgets under ...low‐NOx, rural conditions was performed employing a box model based on the Master Chemical Mechanism (MCMv3.2). The model results were compared with HOx radical measurements performed during the international HOxComp campaign carried out in Jülich, Germany, during summer 2005. Two different air masses influenced the measurement site denoted as high‐NOx (NO, 1–3 ppbv) and low‐NOx (NO, < 1 ppbv) periods. Both modeled OH and HO2 diurnal profiles lay within the measurement range of all HOx measurement techniques, with correlation slopes between measured and modeled OH and HO2 around unity. Recently discovered interference in HO2 measurements caused by RO2 cross sensitivity was found to cause a 30% increase in measured HO2 during daytime on average. After correction of the measured HO2 data, the model HO2 is still in good agreement with the observations at high NOx but overpredicts HO2 by a factor of 1.3 to 1.8 at low NOx. In addition, for two different set of measurements, a missing OH source of 3.6 ± 1.6 and 4.9 ± 2.2 ppb h−1 was estimated from the experimental OH budget during the low‐NOx period using the corrected HO2 data. The measured diurnal profile of the HO2/OH ratio, calculated using the corrected HO2, is well reproduced by the MCM at high NOx but is significantly overestimated at low NOx. Thus, the cycling between OH and HO2 is better described by the model at high NOx than at low NOx. Therefore, similar comprehensive field measurements accompanied by model studies are urgently needed to investigate HOx recycling under low‐NOx conditions.
Key Points
Hox budget and radical recycling at low NOx conditions
Comparison of measured to modeled HOx budgets
The influence of HO2 inteferences due to RO2 cross sensitivity on HOx Budgets
Hydroxyl radicals (OH) are the most important reagent for the oxidation of trace gases in the atmosphere. OH concentrations measured during recent field campaigns in isoprene-rich environments were ...unexpectedly large. A number of studies showed that unimolecular reactions of organic peroxy radicals (RO2) formed in the initial reaction step of isoprene with OH play an important role for the OH budget in the atmosphere at low mixing ratios of nitrogen monoxide (NO) of less than 100 pptv. It has also been suggested that similar reactions potentially play an important role for RO2 from other compounds. Here, we investigate the oxidation of methacrolein (MACR), one major oxidation product of isoprene, by OH in experiments in the simulation chamber SAPHIR under controlled atmospheric conditions. The experiments show that measured OH concentrations are approximately 50% larger than calculated by the Master Chemical Mechanism (MCM) for conditions of the experiments (NO mixing ratio of 90 pptv). The analysis of the OH budget reveals an OH source that is not accounted for in MCM, which is correlated with the production rate of RO2 radicals from MACR. In order to balance the measured OH destruction rate, 0.77 OH radicals (1σ error: ± 0.31) need to be additionally reformed from each reaction of OH with MACR. The strong correlation of the missing OH source with the production of RO2 radicals is consistent with the concept of OH formation from unimolecular isomerization and decomposition reactions of RO2. The comparison of observations with model calculations gives a lower limit of 0.03 s−1 for the reaction rate constant if the OH source is attributed to an isomerization reaction of MACR-1-OH-2-OO and MACR-2-OH-2-OO formed in the MACR + OH reaction as suggested in the literature (Crounse et al., 2012). This fast isomerization reaction would be a competitor to the reaction of this RO2 species with a minimum of 150 pptv NO. The isomerization reaction would be the dominant reaction pathway for this specific RO2 radical in forested regions, where NO mixing ratios are typically much smaller.
The formation of organic nitrates and secondary organic aerosol (SOA) were monitored during the NO3 + limonene reaction in the atmosphere simulation chamber SAPHIR at Research Center Jülich. The 24-h ...run began in a purged, dry, particle-free chamber and comprised two injections of limonene and oxidants, such that the first experiment measured SOA yield in the absence of seed aerosol, and the second experiment yields in the presence of 10 μg m-3 seed organic aerosol. After each injection, two separate increases in aerosol mass were observed, corresponding to sequential oxidation of the two limonene double bonds. Analysis of the measured NO3 , limonene, product nitrate concentrations, and aerosol properties provides mechanistic insight and constrains rate constants, branching ratios and vapor pressures of the products. The organic nitrate yield from NO3 + limonene is approximate30%. The SOA mass yield was observed to be 25-40%. The first injection is reproduced by a kinetic model. PMF analysis of the aerosol composition suggests that much of the aerosol mass results from combined oxidation by both O3 and NO3 , e.g., oxidation of NO3 + limonene products by O3 . Further, later aerosol nitrate mass seems to derive from heterogeneous uptake of NO3 onto unreacted aerosol alkene.
During recent field campaigns, hydroxyl radical (OH) concentrations that were measured by laser-induced fluorescence (LIF) were up to a factor of ten larger than predicted by current chemical models ...for conditions of high OH reactivity and low NO concentration. These discrepancies, which were observed in forests and urban-influenced rural environments, are so far not entirely understood. In summer 2011, a series of experiments was carried out in the atmosphere simulation chamber SAPHIR in Jülich, Germany, in order to investigate the photochemical degradation of isoprene, methyl-vinyl ketone (MVK), methacrolein (MACR) and aromatic compounds by OH. Conditions were similar to those experienced during the PRIDE-PRD2006 campaign in the Pearl River Delta (PRD), China, in 2006, where a large difference between OH measurements and model predictions was found. During experiments in SAPHIR, OH was simultaneously detected by two independent instruments: LIF and differential optical absorption spectroscopy (DOAS). Because DOAS is an inherently calibration-free technique, DOAS measurements are regarded as a reference standard. The comparison of the two techniques was used to investigate potential artifacts in the LIF measurements for PRD-like conditions of OH reactivities of 10 to 30 s−1 and NO mixing ratios of 0.1 to 0.3 ppbv. The analysis of twenty experiment days shows good agreement. The linear regression of the combined data set (averaged to the DOAS time resolution, 2495 data points) yields a slope of 1.02 ± 0.01 with an intercept of (0.10 ± 0.03) × 106 cm−3 and a linear correlation coefficient of R2 = 0.86. This indicates that the sensitivity of the LIF instrument is well-defined by its calibration procedure. No hints for artifacts are observed for isoprene, MACR, and different aromatic compounds. LIF measurements were approximately 30–40% (median) larger than those by DOAS after MVK (20 ppbv) and toluene (90 ppbv) had been added. However, this discrepancy has a large uncertainty and requires further laboratory investigation. Observed differences between LIF and DOAS measurements are far too small to explain the unexpected high OH concentrations during the PRIDE-PRD2006 campaign.
The yields of organic nitrates and of secondary organic aerosol (SOA) particle formation were measured for the reaction NO3+β-pinene under dry and humid conditions in the atmosphere simulation ...chamber SAPHIR at Research Center Jülich. These experiments were conducted at low concentrations of NO3 (NO3+N2O5<10 ppb) and β-pinene (peak~15 ppb), with no seed aerosol. SOA formation was observed to be prompt and substantial (~50% mass yield under both dry conditions and at 60% RH), and highly correlated with organic nitrate formation. The observed gas/aerosol partitioning of organic nitrates can be simulated using an absorptive partitioning model to derive an estimated vapor pressure of the condensing nitrate species of pvap~5×10−6 Torr (6.67×10−4 Pa), which constrains speculation about the oxidation mechanism and chemical identity of the organic nitrate. Once formed the SOA in this system continues to evolve, resulting in measurable aerosol volume decrease with time. The observations of high aerosol yield from NOx-dependent oxidation of monoterpenes provide an example of a significant anthropogenic source of SOA from biogenic hydrocarbon precursors. Estimates of the NO3+β-pinene SOA source strength for California and the globe indicate that NO3 reactions with monoterpenes are likely an important source (0.5–8% of the global total) of organic aerosol on regional and global scales.
Scientific findings from the last decades have clearly highlighted the need for a more comprehensive approach to atmospheric change processes. In fact, observation of atmospheric composition ...variables has been an important activity of atmospheric research that has developed instrumental tools (advanced analytical techniques) and platforms (instrumented passenger aircrafts, ground-based in situ and remote sensing stations, earth observation satellite instruments) providing essential information on the composition of the atmosphere. The variability of the atmospheric system and the extreme complexity of the atmospheric cycles for short-lived gaseous and aerosol species have led to the development of complex models to interpret observations, test our theoretical understanding of atmospheric chemistry and predict future atmospheric composition. The validation of numerical models requires accurate information concerning the variability of atmospheric composition for targeted species via comparison with observations and measurements.
In this paper, we provide an overview of recent advances in instrumentation and methodologies for measuring atmospheric composition changes from space, aircraft and the surface as well as recent improvements in laboratory techniques that permitted scientific advance in the field of atmospheric chemistry. Emphasis is given to the most promising and innovative technologies that will become operational in the near future to improve knowledge of atmospheric composition. Our current observation capacity, however, is not satisfactory to understand and predict future atmospheric composition changes, in relation to predicted climate warming. Based on the limitation of the current European observing system, we address the major gaps in a second part of the paper to explain why further developments in current observation strategies are still needed to strengthen and optimise an observing system not only capable of responding to the requirements of atmospheric services but also to newly open scientific questions.
, a uniquely human fusion gene, has been associated with neuropsychiatric disorders including Alzheimer's disease, schizophrenia, anxiety, and attention deficit disorder. Understanding the ...physiological function of
in the human brain is the first step to uncovering its role in disease. CHRFAM7A was identified as a potent modulator of intracellular calcium and an upstream regulator of Rac1 leading to actin cytoskeleton reorganization and a switch from filopodia to lamellipodia implicating a more efficient neuronal structure. We performed a neurocognitive-MRI correlation exploratory study on 46 normal human subjects to explore the effect of
on human brain.
Dual locus specific genotyping of
was performed on genomic DNA to determine copy number (TaqMan assay) and orientation (capillary sequencing) of the
alleles. As only the direct allele is expressed at the protein level and affects α7 nAChR function, direct allele carriers and non-carriers are compared for neuropsychological and MRI measures. Subjects underwent neuropsychological testing to measure motor (Timed 25-foot walk test, 9-hole peg test), cognitive processing speed (Symbol Digit Modalities Test), Learning and memory (California Verbal Learning Test immediate and delayed recall, Brief Visuospatial Memory Test-Revised immediate and delayed recall) and Beck Depression Inventory-Fast Screen, Fatigue Severity Scale. All subjects underwent MRI scanning on the same 3 T GE scanner using the same protocol. Global and tissue-specific volumes were determined using validated cross-sectional algorithms including FSL's Structural Image Evaluation, using Normalization, of Atrophy (SIENAX) and FSL's Integrated Registration and Segmentation Tool (FIRST) on lesion-inpainted images. The cognitive tests were age and years of education-adjusted using analysis of covariance (ANCOVA). Age-adjusted analysis of covariance (ANCOVA) was performed on the MRI data.
direct allele carrier and non-carrier groups included 33 and 13 individuals, respectively. Demographic variables (age and years of education) were comparable.
direct allele carriers demonstrated an upward shift in cognitive performance including cognitive processing speed, learning and memory, reaching statistical significance in visual immediate recall (FDR corrected
= 0.018). The shift in cognitive performance was associated with smaller whole brain volume (uncorrected
= 0.046) and lower connectivity by resting state functional MRI in the visual network (FDR corrected
= 0.027) accentuating the cognitive findings.
These data suggest that direct allele carriers harbor a more efficient brain consistent with the cellular biology of actin cytoskeleton and synaptic gain of function. Further larger human studies of cognitive measures correlated with MRI and functional imaging are needed to decipher the impact of
on brain function.
Hydroxyl radicals (OH) are the major oxidizing species in the troposphere. Because of their central importance, absolute measurements of their concentrations are needed to validate chemical ...mechanisms of atmospheric models. The extremely low and highly variable concentrations in the troposphere, however, make measurements of OH difficult. Three techniques are currently used worldwide for tropospheric observations of OH after about 30~years of technical developments: Differential Optical Laser Absorption Spectroscopy (DOAS), Laser-Induced Fluorescence Spectroscopy (LIF), and Chemical Ionisation Mass Spectrometry (CIMS). Even though many measurement campaigns with OH data were published, the question of accuracy and precision is still under discussion. Here, we report results of the first formal, blind intercomparison of these techniques. Six OH instruments (4~LIF, 1~CIMS, 1~DOAS) participated successfully in the ground-based, international HOxComp campaign carried out in Jülich, Germany, in summer 2005. Comparisons were performed for three days in ambient air (3~LIF, 1 CIMS) and for six days in the atmosphere simulation chamber SAPHIR (3~LIF, 1~DOAS). All instruments were found to measure tropospheric OH concentrations with high sensitivity and good time resolution. The pairwise correlations between different data sets were linear and yielded high correlation coefficients (r2=0.75−0.96). Excellent absolute agreement was observed for the instruments at the SAPHIR chamber, yielding slopes between 1.01 and 1.13 in the linear regressions. In ambient air, the slopes deviated from unity by factors of 1.06 to 1.69, which can partly be explained by the stated instrumental accuracies. In addition, sampling inhomogeneities and calibration problems have apparently contributed to the discrepancies. The absolute intercepts of the linear regressions did not exceed 0.6×106 cm−3, mostly being insignificant and of minor importance for daytime observations of OH. No relevant interferences with respect to ozone, water vapour, NOx and peroxy radicals could be detected. The HOxComp campaign has demonstrated that OH can be measured reasonably well by current instruments, but also that there is still room for improvement of calibrations.