Although field-collected recordings typically contain multiple simultaneously vocalizing birds of different species, acoustic species classification in this setting has received little study so far. ...This work formulates the problem of classifying the set of species present in an audio recording using the multi-instance multi-label (MIML) framework for machine learning, and proposes a MIML bag generator for audio, i.e., an algorithm which transforms an input audio signal into a bag-of-instances representation suitable for use with MIML classifiers. The proposed representation uses a 2D time-frequency segmentation of the audio signal, which can separate bird sounds that overlap in time. Experiments using audio data containing 13 species collected with unattended omnidirectional microphones in the H. J. Andrews Experimental Forest demonstrate that the proposed methods achieve high accuracy (96.1% true positives/negatives). Automated detection of bird species occurrence using MIML has many potential applications, particularly in long-term monitoring of remote sites, species distribution modeling, and conservation planning.
Animal‐mediated pollination is essential for both ecosystem services and conservation of global biodiversity, but a growing body of work reveals that it is negatively affected by anthropogenic ...disturbance. Landscape‐scale disturbance results in two often inter‐related processes: (1) habitat loss, (2) disruptions of habitat configuration (i.e. fragmentation). Understanding the relative effects of such processes is critical in designing effective management strategies to limit pollination and pollinator decline. We reviewed existing published work from 1989 to 2009 and found that only six of 303 studies considering the influence of landscape context on pollination separated the effects of habitat loss from fragmentation. We provide a synthesis of the current landscape, behavioural, and pollination ecology literature in order to present preliminary multiple working hypotheses explaining how these two landscape processes might independently influence pollination dynamics. Landscape disturbance primarily influences three components of pollination interactions: pollinator density, movement, and plant demography. We argue that effects of habitat loss on each of these components are likely to differ substantially from the effects of fragmentation, which is likely to be more complex and may influence each pollination component in contrasting ways. The interdependency between plants and animals inherent to pollination systems also has the possibility to drive cumulative effects of fragmentation, initiating negative feedback loops between animals and the plants they pollinate. Alternatively, due to their asymmetrical structure, pollination networks may be relatively robust to fragmentation. Despite the potential importance of independent effects of habitat fragmentation, its effects on pollination remain largely untested. We postulate that variation across studies in the effects of ‘fragmentation’ owes much to artifacts of the sampling regimes adopted, particularly (1) incorrectly separating fragmentation from habitat loss, and (2) mis‐matches in spatial scale between landscapes studied and the ecological processes of interest. The field of landscape pollination ecology could be greatly advanced through the consideration and quantification of the matrix, landscape functional connectivity, and pollinator movement behaviour in response to these elements. Studies designed to disentangle the independent effects of habitat loss and fragmentation are essential for gaining insight into landscape‐mediated pollination declines, implementing effective conservation measures, and optimizing ecosystem services in complex landscapes.
Habitat loss is the primary driver of biodiversity decline worldwide, but the effects of fragmentation (the spatial arrangement of remaining habitat) are debated. We tested the hypothesis that forest ...fragmentation sensitivity-affected by avoidance of habitat edges-should be driven by historical exposure to, and therefore species' evolutionary responses to disturbance. Using a database containing 73 datasets collected worldwide (encompassing 4489 animal species), we found that the proportion of fragmentation-sensitive species was nearly three times as high in regions with low rates of historical disturbance compared with regions with high rates of disturbance (i.e., fires, glaciation, hurricanes, and deforestation). These disturbances coincide with a latitudinal gradient in which sensitivity increases sixfold at low versus high latitudes. We conclude that conservation efforts to limit edges created by fragmentation will be most important in the world's tropical forests.
Pollinator recognition by a keystone tropical plant Betts, Matthew G.; Hadley, Adam S.; Kress, W. John
Proceedings of the National Academy of Sciences - PNAS,
03/2015, Letnik:
112, Številka:
11
Journal Article
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Understanding the mechanisms enabling coevolution in complex mutualistic networks remains a central challenge in evolutionary biology. We show for the first time, to our knowledge, that a tropical ...plant species has the capacity to discriminate among floral visitors, investing in reproduction differentially across the pollinator community. After we standardized pollen quality in 223 aviary experiments, successful pollination of Heliconia tortuosa (measured as pollen tube abundance) occurred frequently when plants were visited by long-distance traplining hummingbird species with specialized bills (Formula pollen tubes = 1.21 ± 0.12 SE) but was reduced 5.7 times when visited by straight-billed territorial birds (Formula pollen tubes = 0.20 ± 0.074 SE) or insects. Our subsequent experiments revealed that plants use the nectar extraction capacity of tropical hummingbirds, a positive function of bill length, as a cue to turn on reproductively. Furthermore, we show that hummingbirds with long bills and high nectar extraction efficiency engaged in daily movements at broad spatial scales (∼1 km), but that territorial species moved only short distances (<100 m). Such pollinator recognition may therefore affect mate selection and maximize receipt of high-quality pollen from multiple parents. Although a diffuse pollinator network is implied, because all six species of hummingbirds carry pollen of H. tortuosa , only two species with specialized bills contribute meaningfully to its reproduction. We hypothesize that this pollinator filtering behavior constitutes a crucial mechanism facilitating coevolution in multispecies plant–pollinator networks. However, pollinator recognition also greatly reduces the number of realized pollinators, thereby rendering mutualistic networks more vulnerable to environmental change.
Significance By using structural characteristics, such as long tubular flowers, plants are known to achieve selective visitation by certain pollinator species. These morphological traits typically arise over evolutionary timescales. We show for the first time, to our knowledge, that at least one plant has also evolved the capacity to recognize pollinator species immediately after visitation, thereby increasing the likelihood that a flower visitor has delivered high-quality pollen. This novel responsiveness by the plant leads to functional specialization in an apparently generalized tropical plant–pollinator network. Such specialized linkages likely facilitate coevolution but also, render pollination mutualisms more vulnerable to environmental change.
Aim Climate changes are anticipated to have pervasive negative effects on biodiversity and are expected to necessitate widespread range shifts or contractions. Such projections are based upon the ...assumptions that (1) species respond primarily to broad-scale climatic regimes, or (2) that variation in climate at fine spatial scales is less relevant at coarse spatial scales. However, in montane forest landscapes, high degrees of microclimate variability could influence occupancy dynamics and distributions of forest species. Using high-resolution bird survey and under-canopy air temperature data, we tested the hypothesis that the high vagility of most forest bird species combined with the heterogeneous thermal regime of mountain landscapes would enable them to adjust initial settlement decisions to track their thermal niches. Location Western Cascade Mountains, Oregon, USA. Methods We used dynamic occupancy models to test the degree to which microclimate affects the distribution patterns of forest birds in a heterogeneous mountain environment. In all models we statistically accounted for vegetation structure, vegetation composition and potential biases due to imperfect detection of birds. We generated spatial predictions of forest bird distributions in relation to microclimate and vegetation structure. Results Fine-scale temperature metrics were strong predictors of bird distributions; effects of temperature on within-season occupancy dynamics were as large or larger (1–1.7 times) than vegetation effects. Most species (86.7%) exhibited apparent within-season occupancy dynamics. However, species were almost as likely to be warm associated (i.e., apparent settlement at warmer sites and/or vacancy at cooler sites; 53.3% of species) as cool associated (i.e., apparent settlement at cooler sites and/or vacancy at warmer sites; 46.7% of species), suggesting that microclimate preferences are species specific. Main conclusions High-resolution temperature data increase the quality of predictions about avian distribution dynamics and should be included in efforts to project future distributions. We hypothesize that microclimate-associated distribution patterns may reflect species' potential for behavioural buffering from climate change in montane forest environments.
Mutualistic relationships, such as those between plants and pollinators, may be vulnerable to the local extinctions predicted under global environmental change. However, network theory predicts that ...plant-pollinator networks can withstand species loss if pollinators switch to alternative floral resources (rewiring). Whether rewiring occurs following species loss in natural communities is poorly known because replicated species exclusions are difficult to implement at appropriate spatial scales. We experimentally removed a hummingbird-pollinated plant, Heliconia tortuosa, from within tropical forest fragments to investigate how hummingbirds respond to temporary loss of an abundant resource. Under the rewiring hypothesis, we expected that behavioural flexibility would allow hummingbirds to use alternative resources, leading to decreased ecological specialization and reorganization of the network structure (i.e. pairwise interactions). Alternatively, morphological or behavioural constraints-such as trait-matching or interspecific competition-might limit the extent to which hummingbirds alter their foraging behaviour. We employed a replicated Before-After-Control-Impact experimental design and quantified plant-hummingbird interactions using two parallel sampling methods: pollen collected from individual hummingbirds ('pollen networks', created from >300 pollen samples) and observations of hummingbirds visiting focal plants ('camera networks', created from >19,000 observation hours). To assess the extent of rewiring, we quantified ecological specialization at the individual, species and network levels and examined interaction turnover (i.e. gain/loss of pairwise interactions). H. tortuosa removal caused some reorganization of pairwise interactions but did not prompt large changes in specialization, despite the large magnitude of our manipulation (on average, >100 inflorescences removed in exclusion areas of >1 ha). Although some individual hummingbirds sampled through time showed modest increases in niche breadth following Heliconia removal (relative to birds that did not experience resource loss), these changes were not reflected in species- and network-level specialization metrics. Our results suggest that, at least over short time-scales, animals may not necessarily shift to alternative resources after losing an abundant food resource-even in species thought to be highly opportunistic foragers, such as hummingbirds. Given that rewiring contributes to theoretical predictions of network stability, future studies should investigate why pollinators might not expand their diets after a local resource extinction.
Theoretical models predict strong influences of habitat loss and fragmentation on species distributions and demography, but empirical studies have shown relatively inconsistent support across species ...and systems. We argue that species’ responses to landscape‐scale habitat loss and fragmentation are likely to appear less idiosyncratic if it is recognized that species perceive the same landscapes in different ways. We present a new quantitative approach that uses species distribution models (SDMs) to measure landscapes (e.g. patch size, isolation, matrix amount) from the perspective of individual species. First, we briefly summarize the few efforts to date demonstrating that once differences in habitat distributions are controlled, consistencies in species’ responses to landscape structure emerge. Second, we present a detailed example providing step‐by‐step methods for application of a species‐centered approach using freely available land‐cover data and recent statistical modeling approaches. Third, we discuss pitfalls in current applications of the approach and recommend avenues for future developments. We conclude that the species‐centered approach offers considerable promise as a means to test whether sensitivity to habitat loss and fragmentation is mediated by phylogenetic, ecological, and life‐history traits. Cross‐species generalities in responses to habitat loss and fragmentation will be challenging to uncover unless landscape mosaics are defined using models that reflect differing species‐specific distributions, functional connectivity, and domains of scale. The emergence of such generalities would not only enhance scientific understanding of biotic processes driving fragmentation effects, but would allow managers to estimate species sensitivities in new regions.
Tropical biodiversity and associated ecosystem functions have become heavily eroded through habitat loss. Animal-mediated pollination is required in more than 94% of higher tropical plant species and ...75% of the world's leading food crops, but it remains unclear if corridors avert deforestation-driven pollination breakdown in fragmented tropical landscapes. Here, we used manipulative resource experiments and field observations to show that corridors functionally connect neotropical forest fragments for forest-associated hummingbirds and increase pollen transfer. Further, corridors boosted forest-associated pollinator availability in fragments by 14.3 times compared with unconnected equivalents, increasing overall pollination success. Plants in patches without corridors showed pollination rates equal to bagged control flowers, indicating pollination failure in isolated fragments. This indicates, for the first time, that corridors benefit tropical forest ecosystems beyond boosting local species richness, by functionally connecting mutualistic network partners. We conclude that small-scale adjustments to landscape configuration safeguard native pollinators and associated pollination services in tropical forest landscapes.
To maximize fitness, organisms must assess and select suitable habitat. Early research studying birds suggested that organisms consider primarily vegetation structural cues in their habitat choices. ...We show that experimental exposure to singing in the post-breeding period provides a social cue that is used for habitat selection the following year by a migrant songbird, the black-throated blue warbler (Dendroica caerulescens). Our experimental social cues coerced individuals to adopt territories in areas of very poor habitat quality where individuals typically do not occur. This indicates that social information can override typical associations with vegetation structure. We demonstrate that a strong settlement response was elicited because post-breeding song at a site is highly correlated with reproductive success. These results constitute a previously undocumented, but highly parsimonious mechanism for the inadvertent transfer of reproductive (public) information from successful breeders to dispersers. We hypothesize that post-breeding song is a pervasive and reliable cue for species that communicate vocally, inhabit temporally autocorrelated environments, produce young asynchronously and/or abandon territories after reproductive failure.
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