WRKYs are important regulators in plant development and stress responses. However, knowledge of this superfamily in soybean is limited. In this study, we characterized the drought- and salt-induced ...gene
based on RNA-Seq and qRT-PCR.
, which is 714 bp in length, encoded 237 amino acids and grouped into WRKY II. The promoter region of
included ABER4, MYB, MYC, GT-1, W-box and DPBF
-elements, which possibly participate in abscisic acid (ABA), drought and salt stress responses.
was minimally expressed in different tissues under normal conditions but highly expressed under drought and salt treatments. As a nucleus protein,
was responsive to drought, salt, ABA and salicylic acid (SA) stresses. Using a transgenic hairy root assay, we further characterized the roles of
in abiotic stress tolerance. Compared with control (Williams 82), overexpression of
enhanced drought and salt tolerance, increased proline (Pro) content and decreased malondialdehyde (MDA) content under drought and salt treatment in transgenic soybean seedlings. These results may provide a basis to understand the functions of
in abiotic stress responses in soybean.
The serine carboxypeptidase-like protein (SCPL) family plays a vital role in stress response, growth, development and pathogen defense. However, the identification and functional analysis of SCPL ...gene family members have not yet been performed in wheat.
In this study, we identified a total of 210 candidate genes encoding SCPL proteins in wheat. According to their structural characteristics, it is possible to divide these members into three subfamilies: CPI, CPII and CPIII. We uncovered a total of 209 TaSCPL genes unevenly distributed across 21 wheat chromosomes, of which 65.7% are present in triads. Gene duplication analysis showed that ~ 10.5% and ~ 64.8% of the TaSCPL genes are derived from tandem and segmental duplication events, respectively. Moreover, the Ka/Ks ratios between duplicated TaSCPL gene pairs were lower than 0.6, which suggests the action of strong purifying selection. Gene structure analysis showed that most of the TaSCPL genes contain multiple introns and that the motifs present in each subfamily are relatively conserved. Our analysis on cis-acting elements showed that the promoter sequences of TaSCPL genes are enriched in drought-, ABA- and MeJA-responsive elements. In addition, we studied the expression profiles of TaSCPL genes in different tissues at different developmental stages. We then evaluated the expression levels of four TaSCPL genes by qRT-PCR, and selected TaSCPL184-6D for further downstream analysis. The results showed an enhanced drought and salt tolerance among TaSCPL184-6D transgenic Arabidopsis plants, and that the overexpression of the gene increased proline and decreased malondialdehyde levels, which might help plants adapting to adverse environments. Our results provide comprehensive analyses of wheat SCPL genes that might work as a reference for future studies aimed at improving drought and salt tolerance in wheat.
We conducte a comprehensive bioinformatic analysis of the TaSCPL gene family in wheat, which revealing the potential roles of TaSCPL genes in abiotic stress. Our analysis also provides useful resources for improving the resistance of wheat.
Celotno besedilo
Dostopno za:
DOBA, IZUM, KILJ, NUK, PILJ, PNG, SAZU, SIK, UILJ, UKNU, UL, UM, UPUK
Melatonin (N-acetyl-5-methoxytryptamine) is involved in many developmental processes and responses to various abiotic stresses in plants. Most of the studies on melatonin focus on its functions and ...physiological responses in plants, while its regulation mechanism remains unknown. Caffeic acid 3-O-methyltransferase (COMT) functions at a key step of the biosynthesis process of melatonin. In this study, a COMT-like gene,
(Traes_1AL_D9035D5E0.1) was identified in common wheat (
L.). Transient transformation in wheat protoplasts determined that TaCOMT is localized in cytoplasm.
in wheat was induced by drought stress, gibberellin (GA)3 and 3-Indoleacetic acid (IAA), but not by ABA. In
transgenic
, melatonin contents were higher than that in wild type (WT) plants. Under D-Mannitol treatment, the fresh weight of the transgenic
was significantly higher than WT, and transgenic lines had a stronger root system compared to WT. Drought tolerance assays in pots showed that the survival rate of
-overexpression lines was significantly higher than that of WT lines. this phenotype was similar to that the WT lines treated with melatonin under drought condition. In addition, the
transgenic lines had higher proline content and lower malondialdehyde (MDA) content compared to WT lines after drought treatment. These results indicated that overexpression of the wheat
gene enhances drought tolerance and increases the content of melatonin in transgenic
. It could be one of the potential genes for agricultural applications.
Three-amino-loop-extension (TALE) superfamily genes are widely present in plants and function directly in plant growth and development and abiotic stress response. Although TALE genes have been ...studied in many plant species, members of the TALE family have not been identified in wheat.
In this study, we identified 70 wheat TALE protein candidate genes divided into two subfamilies, KNOX (KNOTTED-like homeodomain) and BEL1-like (BLH/BELL homeodomain). Genes in the same subfamily or branch in the phylogenetic tree are similar in structure, and their encoded proteins have similar motifs and conserved structures. Wheat TALE genes are unevenly distributed on 21 chromosomes and expanded on the fourth chromosome. Through gene duplication analysis, 53 pairs of wheat TALE genes were determined to result from segmental duplication events, and five pairs were caused by tandem duplication events. The Ka/Ks between TALE gene pairs indicates a strong purification and selection effect. There are multiple cis-elements in the 2000 bp promoter sequence that respond to hormones and abiotic stress, indicating that most wheat TALE genes are involved in the growth, development, and stress response of wheat. We also studied the expression profiles of wheat TALE genes in different developmental stages and tissues and under different stress treatments. We detected the expression levels of four TALE genes by qRT-PCR, and selected TaKNOX11-A for further downstream analysis. TaKNOX11-A enhanced the drought and salt tolerances of Arabidopsis thaliana. TaKNOX11-A overexpressing plants had decreased malondialdehyde content and increased proline content, allowing for more effective adaptation of plants to unfavorable environments.
We identified TALE superfamily members in wheat and conducted a comprehensive bioinformatics analysis. The discovery of the potential role of TaKNOX11-A in drought resistance and salt tolerance provides a basis for follow-up studies of wheat TALE family members, and also provides new genetic resources for improving the stress resistance of wheat.
Celotno besedilo
Dostopno za:
DOBA, IZUM, KILJ, NUK, PILJ, PNG, SAZU, SIK, UILJ, UKNU, UL, UM, UPUK
High-performance polypropylene (PP) plays an important role in electrical/electronic engineering fields. Especially in high voltage direct current (HVDC) cables it compares well to cross linked ...polyethylene (XLPE) for its potential application as an eco-friendly material without cross-linking. The space charge injection under high electric stress is main obstacle for the development of HVDC cables. Here we adopted chemical modification on PP with polar functional group to improve the electrical properties, whereby the molecular structure has been designed to obtain excellent insulating material. The space charge suppression, dielectric properties and crystal characteristics of PP with and without grafting with maleic anhydride (MAH) were investigated. Results demonstrated that the MAH was successfully grafted onto PP macromolecular chain. Compared to pure PP, the grafting with 2 wt% MAH can effectively suppress space charge injection and provide better stability in volume resistivity as temperature increases. Besides, their dielectric properties were studied, and the mechanism of space charge suppression was proposed. This provides a useful method to prepare the HVDC cable insulating materials.
The role of North Pacific bomb cyclones in the onset of January 2021 sudden stratospheric warming (SSW) is examined by conducting a set of numerical model experiments. The control simulation, ...initialized 10 days before the SSW onset, successfully reproduces the SSW. As this event is preceded by the bomb cyclones in the North Pacific, their impact is tested by initializing the model without them. This sensitivity experiment shows much weaker polar‐vortex deceleration than the control simulation, resulting in no distinct SSW onset. This difference is attributable to the dampened constructive linear interference between the climatological wave and the cyclone‐related wavenumber‐one anomaly in the sensitivity experiment. It weakens the vertical propagation of wavenumber‐one wave into the stratosphere, thereby reducing wave breaking in the polar stratosphere. This result suggests that bomb cyclones should be considered for better understanding SSW and improving its predictability.
Plain Language Summary
Sudden stratospheric warming (SSW) is a dramatic event characterized by abrupt warming in the polar stratosphere. During this event, the eastward winds encircling the polar stratosphere change to westward winds, due to the breaking of the upward‐propagating planetary‐scale waves. Since the SSW is often followed by unusual weather events (e.g., cold surges), an accurate prediction of SSW is important for a better weather prediction. Here, we examine the role of the rapidly developing North Pacific cyclones in initiating the 2021 SSW. A set of numerical model experiments show that without cyclones, the 2021 SSW is not initiated due to the reduced breaking of the upward‐propagating planetary‐scale waves. This result suggests that the rapidly developing North Pacific cyclones should be considered for better understanding SSW and improving its predictability.
Key Points
The 2021 SSW is successfully reproduced by a model initialized 10 days before the stratospheric warming (SSW)
The model initialized without the North Pacific bomb cyclone does not simulate the 2021 SSW
Removing the North Pacific bomb cyclone reduces the k = 1 wave propagation into the stratosphere, reducing wave breaking in the stratosphere
LIM proteins have been found to play important roles in many life activities, including the regulation of gene expression, construction of the cytoskeleton, signal transduction and metabolic ...regulation. Because of their important roles in many aspects of plant development,
genes have been studied in many plant species. However, the
gene family has not yet been characterized in foxtail millet. In this study, we analyzed the whole genome of foxtail millet and identified 10
genes. All
gene promoters contain MYB and MYC
-acting elements that are related to drought stress. Based on the presence of multiple abiotic stress-related
-elements in the promoter of
, we chose this gene for further study. We analyzed
expression under abiotic stress and hormone treatments using qRT-PCR. We found that
was induced by various abiotic stresses and hormones. Under drought conditions, transgenic rice of
-overexpression had a higher survival rate, higher relative water content and less cell damage than wild type (WT) rice. These results indicate that overexpression of the foxtail millet
gene enhances drought tolerance in transgenic rice, and the
gene can potentially be used for molecular breeding of crops with increased resistance to abiotic stress.
Podocyte injury critically contributes to the pathogenesis of obesity-related glomerulopathy (ORG). Recently, lipid accumulation and inflammatory responses have been found to be involved in podocyte ...injury. This study is to explore their role and relationship in podocyte injury of ORG. In animal experiments, the ORG mice developed proteinuria, podocyte injury, and hypertriglyceridemia, accompanied with deregulated lipid metabolism, renal ectopic lipid deposition, activation of NOD-like receptor protein 3 (NLRP3) inflammasome, and secretion of IL-1β of the kidney. The expression of adipose differentiation-related protein (ADRP), CD36, sterol regulatory element-binding protein 1 (SREBP-1), and peroxisome proliferator-activated receptor α (PPARα) in renal tissue were increased. In in vitro cell experiments, after cultured podocytes were stimulated with leptin, similar to ORG mice, we found aggravated podocyte injury, formatted lipid droplet, increased expression of ADRP and CD36, activated NLRP3 inflammasome, and released IL-1β. In addition, after blocking CD36 with inhibitor sulfo-N-succinimidyl oleate (SSO) or CD36 siRNA, activation of NLRP3 inflammasome and release of IL-1β are downregulated, and podocyte injury was alleviated. However, after blocking NLRP3 with MCC950, although podocyte injury was alleviated and release of IL-1β was decreased, there was no change in the expression of CD36, ADRP, and intracellular lipid droplets. Taken together, our study suggests that CD36-mediated lipid accumulation and activation of NLRP3 inflammasome may be one of the potential pathogeneses of ORG podocyte injury.
More and more evidence indicates that circular RNAs (circRNAs) have important roles in several diseases, especially in cancers. However, their involvement remains to be investigated in breast cancer. ...Through screening circRNA profile, we identified 235 differentially expressed circRNAs in breast cancer. Subsequently, we explored the clinical significance of two circTADA2As in a large cohort of triple-negative breast cancer (TNBC), and performed functional analysis of circTADA2A-E6 in vitro and in vivo to support clinical findings. Finally, we evaluated the effect of circTADA2A-E6 on miR-203a-3p and its target gene SOCS3. We detected two circRNAs, circTADA2A-E6 and circTADA2A-E5/E6, which were among the top five differentially expressed circRNAs in breast cancer. They were consistently and significantly decreased in a large cohort of breast cancer patients, and their downregulation was associated with poor patient survival for TNBC. Especially, circTADA2A-E6 suppressed in vitro cell proliferation, migration, invasion, and clonogenicity and possessed tumor-suppressor capability. circTADA2A-E6 preferentially acted as a miR-203a-3p sponge to restore the expression of miRNA target gene SOCS3, resulting in a less aggressive oncogenic phenotype. circTADA2As as promising prognostic biomarkers in TNBC patients, and therapeutic targeting of circTADA2As/miRNA/mRNA network may be a potential strategy for the treatment of breast cancer.
GDSL-type esterase/lipase proteins (GELPs) belong to the SGNH hydrolase superfamily and contain a conserved GDSL motif at their N-terminus. GELPs are widely distributed in nature, from microbes to ...plants, and play crucial roles in growth and development, stress responses and pathogen defense. However, the identification and functional analysis of
GELP
genes are hardly explored in soybean. This study describes the identification of 194
GELP
genes in the soybean genome and their phylogenetic classification into 11 subfamilies (A–K).
GmGELP
genes are disproportionally distributed on 20 soybean chromosomes. Large-scale WGD/segmental duplication events contribute greatly to the expansion of the soybean
GDSL
gene family. The Ka/Ks ratios of more than 70% of duplicated gene pairs ranged from 0.1–0.3, indicating that most
GmGELP
genes were under purifying selection pressure. Gene structure analysis indicate that more than 74% of
GmGELP
genes are interrupted by 4 introns and composed of 5 exons in their coding regions, and closer homologous genes in the phylogenetic tree often have similar exon-intron organization. Further statistics revealed that approximately 56% of subfamily K members contain more than 4 introns, and about 28% of subfamily I members consist of less than 4 introns. For this reason, the two subfamilies were used to simulate intron gain and loss events, respectively. Furthermore, a new model of intron position distribution was established in current study to explore whether the evolution of multi-gene families resulted from the diversity of gene structure. Finally, RNA-seq data were used to investigate the expression profiles of
GmGELP
gene under different tissues and multiple abiotic stress treatments. Subsequently, 7 stress-responsive
GmGELP
genes were selected to verify their expression levels by RT-qPCR, the results were consistent with RNA-seq data. Among 7
GmGELP
genes,
GmGELP28
was selected for further study owing to clear responses to drought, salt and ABA treatments. Transgenic
Arabidopsis thaliana
and soybean plants showed drought and salt tolerant phenotype. Overexpression of
GmGELP28
resulted in the changes of several physiological indicators, which allowed plants to adapt adverse conditions. In all,
GmGELP28
is a potential candidate gene for improving the salinity and drought tolerance of soybean.
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