Given such mountains of papers, scientists cannot be expected to examine in detail every single new paper relevant to their interests 3. ...it is both advantageous and necessary to rely on regular ...summaries of the recent literature. The bottom-right situation (many literature reviews but few research papers) is not just a theoretical situation; it applies, for example, to the study of the impacts of climate change on plant diseases, where there appear to be more literature reviews than research studies 33.
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Dostopno za:
DOBA, IZUM, KILJ, NUK, PILJ, PNG, SAZU, SIK, UILJ, UKNU, UL, UM, UPUK
Human presence is generally negatively related to species richness locally, but the relationship is positive at coarse scales. An increase in the strength of the latter correlation with increasing ...study resolution has been documented within studies, but it is not known whether such a scale dependence is present across different studies. We test this with data on the spatial co-occurrence of human beings and the species richness of plants and vertebrates from a continuum of scales. The correlation coefficient between human presence and species richness is positively related to study grain and extent. The correlation turns from positive to negative below a study grain of c. 1 km and below a study extent of c. 10 000 km². The broad-scale positive correlation between human presence and species richness suggests that people have preferentially settled and generally flourished in areas of high biodiversity and/or have contributed to it with species introductions and habitat diversification. The scale dependency of the correlation between people and biodiversity's presence emphasizes the importance of the preservation of green areas in densely populated regions.
► Fraxinus excelsior is threatened by an emerging fungal disease. ► We review conservation strategies applied to this new plant health issue. ► A breeding program for resistance or tolerance to the ...disease is needed. ► Dead and dying ash trees should be left in the forest. ► Interdisciplinary collaboration is required to tackle this conservation challenge.
Common ash (Fraxinus excelsior) is a keystone tree species throughout temperate Europe whose future existence is threatened by an emerging invasive fungal disease. Ash dieback, which first appeared in Poland in the 1990s, has rapidly spread to most eastern, central and northern European countries. The causal agent of the disease, the ascomycete Hymenoscyphus pseudoalbidus (anamorph Chalara fraxinea), was recently described as a new species. Given that the disease lethally affects ash trees of all age classes, and that ash tree mortality levels are high, F. excelsior and the many organisms dependent on ash trees are under threat. Based on a literature survey, we provide an overview of the present knowledge on ash dieback, identify practical recommendations and point out research needs. The observation of relatively resistant individual ash trees (although at very low frequency) calls for a rapid germplasm collection effort to establish a breeding program for resistance or tolerance to the disease. Ash trees that appear to be tolerant to the pathogen should not be felled, unless they pose an unacceptable risk to people’s security. Given that the pathogen does not form propagules on wood, and given the importance of deadwood for biodiversity conservation, dead and dying ash trees should be left in the forest. Landscape pathology and genetic tools can be used to reconstruct the dispersal pathways of H. pseudoalbidus and to identify environmental features associated with variation in disease severity, so as to better predict the further development of the epidemic. Observations on differences in susceptibility of various ash species are needed to locate the geographic origin of the pathogen and to identify Fraxinus species which might be used for resistance breeding or even replacement of F. excelsior. Conservation biologists, landscape managers, restoration ecologists, social scientists and tree geneticists need to engage with forest pathologists and the various stakeholders throughout the distributional range of F. excelsior so as to tackle this pressing conservation challenge.
Summary
The ascomycete Hymenoscyphus pseudoalbidus (anamorph Chalara fraxinea) causes a lethal disease known as ash dieback on Fraxinus excelsior and Fraxinus angustifolia in Europe. The pathogen was ...probably introduced from East Asia and the disease emerged in Poland in the early 1990s; the subsequent epidemic is spreading to the entire native distribution range of the host trees. This pathogen profile represents a comprehensive review of the state of research from the discovery of the pathogen and points out knowledge gaps and research needs.
Taxonomy
Members of the genus Hymenoscyphus (Helotiales, Leotiomycetidae, Leotiomycetes, Ascomycota) are small discomycetes which form their ascomata on dead plant material. A phylogeny based on the internal transcribed spacers (ITSs) of the rDNA indicated the avirulent Hymenoscyphus albidus, a species native to Europe, as the closest relative of H. pseudoalbidus.
Symptoms
Hymenoscyphus pseudoalbidus causes necrotic lesions on leaves, twigs and stems, eventually leading to wilting and dieback of girdled shoots. Bark lesions are characterized by a typical dark‐ to cinnamon‐brown discoloration.
Life cycle
Hymenoscyphus pseudoalbidus is heterothallic and reproduces sexually on ash petioles in the litter once a year. Ascospores are wind dispersed and infect ash leaves during the summer. The asexual spores only serve as spermatia.
Tools and techniques
The most important techniques for fungal handling, such as detection, isolation, culturing, storage, crossing and ascocarp production, are briefly described.
Management
Once the disease is established, management is hardly possible. The occurrence of a small fraction of partially tolerant trees constitutes hope for resistance breeding in the future. Healthy‐looking trees should be preserved.
Maintaining forest health is a worldwide challenge due to emerging tree diseases, shifts in climate conditions and other global change stressors. Research on forest health is thus accumulating ...rapidly, but there has been little use of scientometric approaches in forest pathology and dendrology. Scientometrics is the quantitative study of trends in the scientific literature. As with all tools, scientometrics needs to be used carefully (e.g., by checking findings in multiple databases) and its results must be interpreted with caution. In this overview, we provide some examples of studies of patterns in the scientific literature related to forest health and tree pathogens. Whilst research on ash dieback has increased rapidly over the last years, papers mentioning the Waldsterben have become rare in the literature. As with human health and diseases, but in contrast to plant health and diseases, there are consistently more publications mentioning “tree health” than “tree disease,” possibly a consequence of the often holistic nature of forest pathology. Scientometric tools can help balance research attention towards understudied emerging risks to forest trees, as well as identify temporal trends in public interest in forests and their health.
•Food and agricultural policy undervalues farmer seed networks.•These networks are important globally in circulating planting material among farmers.•We challenge four common misconceptions in policy ...and practice about seed networks.•Farmer seed networks are efficient and open but also selective in seed provisioning.•Commercialization and regulation are unlikely to eradicate farmer seed networks.
The importance of seed provisioning in food security and nutrition, agricultural development and rural livelihoods, and agrobiodiversity and germplasm conservation is well accepted by policy makers, practitioners and researchers. The role of farmer seed networks is less well understood and yet is central to debates on current issues ranging from seed sovereignty and rights for farmers to GMOs and the conservation of crop germplasm. In this paper we identify four common misconceptions regarding the nature and importance of farmer seed networks today. (1) Farmer seed networks are inefficient for seed dissemination. (2) Farmer seed networks are closed, conservative systems. (3) Farmer seed networks provide ready, egalitarian access to seed. (4) Farmer seed networks are destined to weaken and disappear. We challenge these misconceptions by drawing upon recent research findings and the authors’ collective field experience in studying farmer seed systems in Africa, Europe, Latin America and Oceania. Priorities for future research are suggested that would advance our understanding of seed networks and better inform agricultural and food policy.
Abstract
Microbial ecology provides insights into the ecological and evolutionary dynamics of microbial communities underpinning every ecosystem on Earth. Microbial communities can now be ...investigated in unprecedented detail, although there is still a wealth of open questions to be tackled. Here we identify 50 research questions of fundamental importance to the science or application of microbial ecology, with the intention of summarising the field and bringing focus to new research avenues. Questions are categorised into seven themes: host–microbiome interactions; health and infectious diseases; human health and food security; microbial ecology in a changing world; environmental processes; functional diversity; and evolutionary processes. Many questions recognise that microbes provide an extraordinary array of functional diversity that can be harnessed to solve real-world problems. Our limited knowledge of spatial and temporal variation in microbial diversity and function is also reflected, as is the need to integrate micro- and macro-ecological concepts, and knowledge derived from studies with humans and other diverse organisms. Although not exhaustive, the questions presented are intended to stimulate discussion and provide focus for researchers, funders and policy makers, informing the future research agenda in microbial ecology.
We identify research questions in the field of microbial ecology, with emerging themes that recognise vast microbial functions that could benefit humanity, and the need to integrate knowledge across organisms.
Wood-decaying fungi are essential for the functioning of forest ecosystems. They provide habitat for many other organisms and enable the regeneration of forests throughout the world. Since wood ...decomposition is a decisive process in nutrient recycling, soil formation and the carbon budget of forest ecosystems, it is receiving increasing attention from forest ecologists, pathologists and managers. Research has focussed on the factors driving the species-richness of wood-decomposing organisms and is moving on to analyse the effects of this species-richness on ecosystem functioning. Coarse woody debris (CWD) and its associated wood-decaying organisms have been drastically reduced in abundance and diversity by forestry and so these features often have potential as conservation indicators. Protective measures at a landscape level are needed for threatened wood-inhabiting fungi. These include restricting salvage operations in windthrow stands, actively encouraging the accumulation of deadwood in forests, and facilitating decay in standing trees by inoculating them with fungi. Here, we aim to collect and summarize recently produced work on deadwood ecology, pointing out research gaps and perspectives.
This brilliant and original book by Jan Zadoks, a renowned, prolific and polyglot Dutch plant epidemiologist 2, provides a systematic, learned and well-structured overview of our understanding of ...medieval crop protection in Europe.
Increasing the representation of women in academia is a priority challenge in higher education policy. This study uses data from the Italian University habilitation competition in 2012 to test ...whether this national, standardized and quantitative assessment of researchers contributed to improving the situation. The proportion of female applications (on the whole about 36%) was in many fields higher than the reported proportion of female University professors (27%, 2010), but lower than the proportion of female researchers (2010) in Italy (45% and 51% for researchers with and without a permanent position, respectively). There was still a gap between the proportion of female applications at the associate (on average 39%) and full professor level (29%). A similar gap was also present between scientific disciplines and the humanities. Average success rates of female applications (41.2%) were on the whole lower than those of male applications (43.9%), but in most fields these differences were not significant. Overall, it is generally much lower proportion of female applications rather than their lower success rate that perpetuates the low proportion of female academics in Italy. More effort is needed to support female researchers in choosing and pursuing an academic career.
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Dostopno za:
DOBA, IZUM, KILJ, NUK, PILJ, PNG, SAZU, UILJ, UKNU, UL, UM, UPUK