In animal societies, individuals may take on different roles to fulfil their own needs and the needs of their group. Ant colonies display high levels of organizational complexity, with ants ...fulfilling different roles at different timescales (what is known as task allocation). Factors affecting task allocation can be at the individual level (e.g. physiology), or at the group level (e.g. the network of interactions). We focus on group level processes by exploring the relationship between interaction networks, task allocation and task switching using a previously published data set (Mersch et al., 2013, Science, 340(6136), 1090–1093) tracking the behaviour of six Camponotus fellah colonies over 41 days. In our new analyses, our goal was to better explain the noisy process of task switching beyond simple age polyethism. First, we investigated the architecture of interaction networks using node (individual) level network measures and their relation to the individual's task – foraging, cleaning or nursing – and whether or not the ant switched tasks. We then explored how noisy information propagation was among ants, as a function of the colony composition (how many ants carried out which tasks), through the information-theoretic metric of ‘effective information’. Our results show that interaction history is tied to task allocation: ants that switched to a task were more likely to have interacted with other ants carrying out that task. The degree to which interactions related to task allocation, as well as the noise in those interactions, depended on which groups of ants were interacting. Overall, we found that colony cohesion was stable even as ant level network measures varied more for ants when they switched functional groups; thus, ant colonies maintained a high level of information flow as determined by network analysis, and ant functional groups played different roles in maintaining colony cohesion through varied information flows.
•We analysed the interaction networks of six C. fellah colonies.•We tested how centrality and information flow are tied to task switching.•Node metrics and effective information explained functional group differences.•Interactions were correlated with task switching.•The strength of this correlation, however, differed across functional groups.
Temporal patterns of plant-insect interactions are readily observed within fossil datasets but spatial variability is harder to disentangle without comparable modern methods due to limitations in ...preservation. This is problematic as spatial variability influences community structure and interactions. To address this we replicated paleobotanical methods within three modern forests, creating an analogous dataset that rigorously tested inter- and intra-forest plant-insect variability. Random mixed effects models, non-metric multidimensional scaling (NMDS) ordinations, and bipartite network- and node-level metrics were used. Total damage frequency and diversity did not differ across forests but differences in functional feeding groups (FFGs) were observed across forests, correlating with plant diversity, evenness, and latitude. Overall, we found higher generalized herbivory within the temperate forests than the wet-tropical, a finding also supported by co-occurrence and network analyses at multiple spatial scales. Intra-forest analyses captured consistent damage type communities, supporting paleobotanical efforts. Bipartite networks captured the feeding outbreak of Lymantria dispar caterpillars; an exciting result as insect outbreaks have long been unidentifiable within fossil datasets. These results support paleobotanical assumptions about fossil insect herbivore communities, provide a comparative framework between paleobotanical and modern communities, and suggest a new analytical framework for targeting modern and fossil outbreaks of insect feeding.
Patterns in parasite diversity are shaped by their environmental and ecological settings, and to better understand their interactions with hosts and the corresponding biology, it is crucial to ...understand these context-dependent patterns. To achieve this, we use cymothoid isopods, an important group of fish parasites, to test a long-standing hypothesis about parasite diversity and prevalence pattern: whether semi-enclosed water bodies allow low diversity and high prevalence of parasitic isopods. Specifically, we compare these patterns between Chilika lagoon (Odisha, India), a semi-enclosed water body, and the adjoining Odisha coast (India). Our finding reveals that the semi-enclosed Chilika lagoon has a considerably lower diversity of parasitic isopods than its adjoining open sea along the Odisha coast. Additionally, the parasitic isopod infection levels in Chilika lagoon are noticeably higher, and isopod assemblage is less even than those in coastal waters along the Odisha coast. Our results support the hypothesised association between enclosed water bodies, parasite diversity, and host prevalence and contribute to an enhanced comprehension of the ecology of parasitic isopods in distinct marine environments.
Roughly 10% of the Earth's surface is permanently covered by glaciers and ice sheets and in mountain ecosystems, this proportion of ice cover is often even higher. From an ecological perspective, ...ice-dominated ecosystems place harsh controls on life including cold temperature, limited nutrient availability, and often prolonged darkness due to snow cover for much of the year. Despite these limitations, glaciers, and perennial snowfields support diverse, primarily microbial communities, though macroinvertebrates and vertebrates are also present. The availability and mass balance of key elements (carbon (C), nitrogen (N), phosphorous (P) are known to influence the population dynamics of organisms, and ultimately shape the structure and function of ecosystems worldwide. While considerable attention has been devoted to patterns of biodiversity in mountain cryosphere-influenced ecosystems, the ecological stoichiometry of these habitats has received much less attention. Understanding this emerging research arena is particularly pressing in light of the rapid recession of glaciers and perennial snowfields worldwide. In this review, we synthesize existing knowledge of ecological stoichiometry, nutrient availability, and food webs in the mountain cryosphere (specifically glaciers and perennial snowfields). We use this synthesis to develop more general understanding of nutrient origins, distributions, and trophic interactions in these imperiled ecosystems. We focus our efforts on three major habitats: glacier surfaces (supraglacial), the area beneath glaciers (subglacial), and adjacent downstream habitats (i.e., glacier-fed streams and lakes). We compare nutrient availability in these habitats to comparable habitats on continental ice sheets (e.g., Greenland and Antarctica) and show that, in general, nutrient levels are substantially different between the two. We also discuss how ongoing climate warming will alter nutrient and trophic dynamics in mountain glacier-influenced ecosystems. We conclude by highlighting the pressing need for studies to understand spatial and temporal stoichiometric variation in the mountain cryosphere, ideally with direct comparisons to continental ice sheets, before these imperiled habitats vanish completely.
In the technique presented here, dubbed ‘qMRS’, we quantify the change in 1H MRS signal following administration of 2H-labeled glucose. As in recent human DMRS studies, we administer 6,6′-2H2-glucose ...orally to healthy subjects. Since 2H is not detectable by 1H MRS, the transfer of the 2H label from glucose to a downstream metabolite leads to a reduction in the corresponding 1H MRS resonance of the metabolite, even if the total concentration of both isoforms remains constant. Moreover, introduction of the deuterium label alters the splitting pattern of the proton resonances, making indirect detection of the deuterated forms– as well as the direct detection of the decrease in unlabeled form– possible even without a 2H coil. Because qMRS requires only standard 1H MRS acquisition methods, it can be performed using commonly implemented single voxel spectroscopy (SVS) and chemical shift imaging (CSI) sequences. In this work, we implement qMRS in semi-LASER based CSI, generating dynamic maps arising from the fitted spectra, and demonstrating the feasibility of using qMRS and qCSI to monitor dynamic metabolism in the human brain using a 7T scanner with no auxiliary hardware.
The Warburg effect refers to a curious behavior observed in many organisms and cell types including cancer cells, yeast and bacteria, wherein both the efficient aerobic pathway and the inefficient ...fermentation pathway are utilized for respiration, despite the presence of ample oxygen. Also termed as overflow metabolism in bacteria, this phenomena has remained an enigmatic and poorly understood phenomenon despite years of experimental work. Here, we focus on bacterial cells and build a model of three trade offs involved in the utilization of aerobic and anaerobic respiration pathways (rate versus yield, surface area versus volume, and fast versus slow biomass production) to explain the observed behavior in cellular systems. The model so constructed also predicts changes in the relative usage of both pathways in terms of size and shape constraints of the cell, and identifies how substrate availability influences growth rate. Additionally, we use the model to explain certain complex phenomena in modern- and paleo-ecosystems, via the concept of overflow metabolism.
Protein-protein interaction (PPI) networks represent complex intra-cellular protein interactions, and the presence or absence of such interactions can lead to biological changes in an organism. ...Recent network-based approaches have shown that a phenotype's PPI network's resilience to environmental perturbations is related to its placement in the tree of life; though we still do not know how or why certain intra-cellular factors can bring about this resilience. Here, we explore the influence of gene expression and network properties on PPI networks' resilience. We use publicly available data of PPIs for E. coli, S. cerevisiae, and H. sapiens, where we compute changes in network resilience as new nodes (proteins) are added to the networks under three node addition mechanisms-random, degree-based, and gene-expression-based attachments. By calculating the resilience of the resulting networks, we estimate the effectiveness of these node addition mechanisms. We demonstrate that adding nodes with gene-expression-based preferential attachment (as opposed to random or degree-based) preserves and can increase the original resilience of PPI network in all three species, regardless of gene expression distribution or network structure. These findings introduce a general notion of prospective resilience, which highlights the key role of network structures in understanding the evolvability of phenotypic traits.
Non-invasive methods of detecting early-stage Alzheimer’s disease (AD) can provide valuable insight into disease pathology, improving the diagnosis and treatment of AD. Nuclear Overhauser enhancement ...(NOE) MRI is a technique that provides image contrast sensitive to lipid and protein content in the brain. These macromolecules have been shown to be altered in Alzheimer’s pathology, with early disruptions in cell membrane integrity and signaling pathways leading to the buildup of amyloid-beta plaques and neurofibrillary tangles. We used template-based analyzes of NOE MRI data and the characteristic Z-spectrum, with parameters optimized for increase specificity to NOE, to detect changes in lipids and proteins in an AD mouse model that recapitulates features of human AD. We find changes in NOE contrast in the hippocampus, hypothalamus, entorhinal cortex, and fimbria, with these changes likely attributed to disruptions in the phospholipid bilayer of cell membranes in both gray and white matter regions. This study suggests that NOE MRI may be a useful tool for monitoring early-stage changes in lipid-mediated metabolism in AD and other disorders with high spatial resolution.
Exceptionally preserved fossil sites have allowed specimen-based identification of trophic interactions to which network analyses have been applied. However, network analyses of the fossil record ...suffer from incomplete and indirect data, time averaging that obscures species coexistence, and biases in preservation. Here, we present a high-resolution fossil data set from Raymond Quarry member of the mid-Cambrian Burgess Shale (7,549 specimens, 61 taxa, ∼510 Mya) and formulate a measure of “preservation bias” that aids identification of assemblage subsets to which network analyses can be reliably applied. For these sections, abundance correlation network analyses predicted longitudinally consistent trophic and competitive interactions. Our analyses predicted previously postulated trophic interactions with 83.5% accuracy and demonstrated a shift from specialist interaction-dominated assemblages to ones dominated by generalist and competitive interactions. This approach provides a robust, taphonomically corrected framework to explore and predict in detail the existence and ecological character of putative interactions in fossil data sets.
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•Network analysis of well-preserved fossil communities can predict probable interactions•Clustering analyses of these interactions reveal possible ecological categories•Agent-based models can help infer/map these categories to known ecological patterns•High agreement of predictions to hypothesized trophic interactions from literature
Biological Sciences; Evolutionary Biology; Paleobiology
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