Abstract
We analyse the anisotropic clustering of massive galaxies from the Sloan Digital Sky Survey III Baryon Oscillation Spectroscopic Survey (BOSS) Data Release 9 (DR9) sample, which consists of ...264 283 galaxies in the redshift range 0.43 < z < 0.7 spanning 3275 deg2. Both peculiar velocities and errors in the assumed redshift-distance relation ('Alcock-Paczynski effect') generate correlations between clustering amplitude and orientation with respect to the line of sight. Together with the sharp baryon acoustic oscillation (BAO) standard ruler, our measurements of the broad-band shape of the monopole and quadrupole correlation functions simultaneously constrain the comoving angular diameter distance (2190 ± 61 Mpc) to z = 0.57, the Hubble expansion rate at z = 0.57 (92.4 ± 4.5 km s−1 Mpc−1) and the growth rate of structure at that same redshift (dσ8/d ln a = 0.43 ± 0.069). Our analysis provides the best current direct determination of both D
A and H in galaxy clustering data using this technique. If we further assume a Λcold dark matter expansion history, our growth constraint tightens to dσ8/d ln a = 0.415 ± 0.034. In combination with the cosmic microwave background, our measurements of D
A, H and dσ8/d ln a all separately require dark energy at z > 0.57, and when combined imply ΩΛ = 0.74 ± 0.016, independent of the Universe's evolution at z < 0.57. All of these constraints assume scale-independent linear growth, and assume general relativity to compute both (10 per cent) non-linear model corrections and our errors. In our companion paper, Samushia et al., we explore further cosmological implications of these observations.
We describe the design and data analysis of the DEEP2 Galaxy Redshift Survey, the densest and largest high-precision redshift survey of galaxies at z approx. 1 completed to date. The survey was ...designed to conduct a comprehensive census of massive galaxies, their properties, environments, and large-scale structure down to absolute magnitude MB = −20 at z approx. 1 via approx.90 nights of observation on the Keck telescope. The survey covers an area of 2.8 Sq. deg divided into four separate fields observed to a limiting apparent magnitude of R(sub AB) = 24.1. Objects with z approx. < 0.7 are readily identifiable using BRI photometry and rejected in three of the four DEEP2 fields, allowing galaxies with z > 0.7 to be targeted approx. 2.5 times more efficiently than in a purely magnitude-limited sample. Approximately 60% of eligible targets are chosen for spectroscopy, yielding nearly 53,000 spectra and more than 38,000 reliable redshift measurements. Most of the targets that fail to yield secure redshifts are blue objects that lie beyond z approx. 1.45, where the O ii 3727 Ang. doublet lies in the infrared. The DEIMOS 1200 line mm(exp −1) grating used for the survey delivers high spectral resolution (R approx. 6000), accurate and secure redshifts, and unique internal kinematic information. Extensive ancillary data are available in the DEEP2 fields, particularly in the Extended Groth Strip, which has evolved into one of the richest multiwavelength regions on the sky. This paper is intended as a handbook for users of the DEEP2 Data Release 4, which includes all DEEP2 spectra and redshifts, as well as for the DEEP2 DEIMOS data reduction pipelines. Extensive details are provided on object selection, mask design, biases in target selection and redshift measurements, the spec2d two-dimensional data-reduction pipeline, the spec1d automated redshift pipeline, and the zspec visual redshift verification process, along with examples of instrumental signatures or other artifacts that in some cases remain after data reduction. Redshift errors and catastrophic failure rates are assessed through more than 2000 objects with duplicate observations. Sky subtraction is essentially photon-limited even under bright OH sky lines; we describe the strategies that permitted this, based on high image stability, accurate wavelength solutions, and powerful B-spline modeling methods. We also investigate the impact of targets that appear to be single objects in ground-based targeting imaging but prove to be composite in Hubble Space Telescope data; they constitute several percent of targets at z approx. 1, approaching approx. 5%-10% at z > 1.5. Summary data are given that demonstrate the superiority of DEEP2 over other deep high-precision redshift surveys at z approx. 1 in terms of redshift accuracy, sample number density, and amount of spectral information. We also provide an overview of the scientific highlights of the DEEP2 survey thus far.
We measure the acoustic scale from the angular power spectra of the Sloan Digital Sky Survey III (SDSS-III) Data Release 8 imaging catalog that includes 872, 921 galaxies over ~10,000 deg super(2) ...between 0.45 < z < 0.65. The extensive spectroscopic training set of theBaryon Oscillation Spectroscopic Survey luminous galaxies allows precise estimates of the true redshift distributions of galaxies in our imaging catalog. Utilizing the redshift distribution information, we build templates and fit to the power spectra of the data, which are measured in our companion paper, to derive the location of Baryon acoustic oscillations (BAOs) while marginalizing over many free parameters to exclude nearly all of the non-BAO signal. We derive the ratio of the angular diameter distance to the sound horizon scale D sub(A)(z)/r sub(s) = 9.212 super(+0.416) sub(-0.404) at z = 0.54, and therefore D sub(A)(z) = 1411 + or - 65 Mpc at z = 0.54; the result is fairly independent of assumptions on the underlying cosmology. Our measurement of angular diameter distance D sub(A)(z) is 1.4sigma higher than what is expected for the concordance LambdaCDM, in accordance to the trend of other spectroscopic BAO measurements for z gap 0.35. We report constraints on cosmological parameters from our measurement in combination with the WMAP7 data and the previous spectroscopic BAO measurements of SDSS and WiggleZ. We refer to our companion papers (Ho et al.; de Putter et al.) for investigations on information of the full power spectrum.
We analyse the anisotropic clustering of the Baryon Oscillation Spectroscopic Survey (BOSS) CMASS Data Release 11 (DR11) sample, which consists of 690 827 galaxies in the redshift range 0.43 < z < ...0.7 and has a sky coverage of 8498 deg2. We perform our analysis in Fourier space using a power spectrum estimator suggested by Yamamoto et al. We measure the multipole power spectra in a self-consistent manner for the first time in the sense that we provide a proper way to treat the survey window function and the integral constraint, without the commonly used assumption of an isotropic power spectrum and without the need to split the survey into subregions. The main cosmological signals exploited in our analysis are the baryon acoustic oscillations and the signal of redshift space distortions, both of which are distorted by the Alcock–Paczynski effect. Together, these signals allow us to constrain the distance ratio D
V
(z
eff)/r
s
(z
d
) = 13.89 ± 0.18, the Alcock–Paczynski parameter F
AP(z
eff) = 0.679 ± 0.031 and the growth rate of structure f (z
eff)σ8(z
eff) = 0.419 ± 0.044 at the effective redshift z
eff = 0.57. We emphasize that our constraints are robust against possible systematic uncertainties. In order to ensure this, we perform a detailed systematics study against CMASS mock galaxy catalogues and N-body simulations. We find that such systematics will lead to 3.1 per cent uncertainty for fσ8 if we limit our fitting range to k = 0.01–0.20 h Mpc−1, where the statistical uncertainty is expected to be three times larger. We did not find significant systematic uncertainties for D
V
/r
s
or F
AP. Combining our data set with Planck to test General Relativity (GR) through the simple γ-parametrization, where the growth rate is given by
$f(z) = \Omega ^{\gamma }_{\rm m}(z)$
, reveals a ∼2σ tension between the data and the prediction by GR. The tension between our result and GR can be traced back to a tension in the clustering amplitude σ8 between CMASS and Planck.
Targeted postmortem genetic testing of the 4 major channelopathy-susceptibility genes (KCNQ1, KCNH2, SCN5A, and RYR2) have yielded putative pathogenic mutations in ≤30% of autopsy-negative sudden ...unexplained death in the young (SUDY) cases with highest yields derived from the subset of exertion-related SUDY. Here, we evaluate the role of whole-exome sequencing in exertion-related SUDY cases.
From 1998 to 2010, 32 cases of exertion-related SUDY were referred by Medical Examiners for a cardiac channel molecular autopsy. A mutational analysis of the major long-QT syndrome-susceptibility genes (KCNQ1, KCNH2, and SCN5A) and catecholaminergic polymorphic ventricular tachycardia-susceptibility gene (RYR2) identified a putative pathogenic mutation in 11 cases. Whole-exome sequencing was performed on the remaining 21 targeted gene-negative SUDY cases. After whole-exome sequencing, a gene-specific surveillance of all genes (N=100) implicated in sudden death was performed to identify putative pathogenic mutation(s). Three of these 21 decedents had a clinically actionable, pathogenic mutation (CALM2-F90L, CALM2-N98S, and PKP2-N634fs). Of the 18 remaining cases, 7 hosted at least 1 variant of unknown significance with a minor allele frequency <1:20 000. The overall yield of pathogenic mutations was higher among decedents aged 1 to 10 years (10/11, 91%) than those aged 11 to 19 years (4/21, 19%, P=0.0001).
Molecular screening in this clinical scenario is appropriate with a pathogenic mutation detection rate of 44% using direct DNA sequencing followed by whole-exome sequencing. Only 5 of the 100 interrogated sudden death genes hosted actionable pathogenic mutations for more than one third of these exertion-related, autopsy-negative SUDY cases.
We present the distance measurement to z = 0.32 using the eleventh data release (DR) of the Sloan Digital Sky Survey-III Baryon Acoustic Oscillation Survey (BOSS). We use 313 780 galaxies of the ...low-redshift (LOWZ) sample over 7341 square degrees to compute D ... =(1264±25)(r d /r... ) -- a sub 2...per...cent measurement - using the baryon acoustic feature measured in the galaxy two-point correlation function and power spectrum. We compare our results to those obtained in DR10. We study observational systematics in the LOWZ sample and quantify potential effects due to photometric offsets between the northern and southern Galactic caps. We find the sample to be robust to all systematic effects found to impact on the targeting of higher redshift BOSS galaxies and that the observed north-south tensions can be explained by either limitations in photometric calibration or by sample variance, and have no impact on our final result. Our measurement, combined with the baryonic acoustic scale at z = 0.57, is used in Anderson et al. to constrain cosmological parameters. (ProQuest: ... denotes formulae/symbols omitted.)
ABSTRACT
We present the Emission Line Galaxy (ELG) sample of the extended Baryon Oscillation Spectroscopic Survey from the Sloan Digital Sky Survey IV Data Release 16. We describe the observations ...and redshift measurement for the 269 243 observed ELG spectra, and then present the large-scale structure catalogues, used for the cosmological analysis, and made of 173 736 reliable spectroscopic redshifts between 0.6 and 1.1. We perform a spherically averaged baryon acoustic oscillations (BAO) measurement in configuration space, with density field reconstruction: the data two-point correlation function shows a feature consistent with that of the BAO, the BAO model being only weakly preferred over a model without BAO (Δχ2 < 1). Fitting a model constrained to have a BAO feature provides a 3.2 per cent measurement of the spherically averaged BAO distance DV(zeff)/rdrag = 18.23 ± 0.58 at the effective redshift zeff = 0.845.
Climate change is leading to shifts in species geographical distributions, but populations are also probably adapting to environmental change at different rates across their range. Owing to a lack of ...natural and empirical data on the influence of phenotypic adaptation on range shifts of marine species, we provide a general conceptual model for understanding population responses to climate change that incorporates plasticity and adaptation to environmental change in marine ecosystems. We use this conceptual model to help inform where within the geographical range each mechanism will probably operate most strongly and explore the supporting evidence in species. We then expand the discussion from a single-species perspective to community-level responses and use the conceptual model to visualize and guide research into the important yet poorly understood processes of plasticity and adaptation. This article is part of the theme issue 'The role of plasticity in phenotypic adaptation to rapid environmental change'.
14-3-3ζ promotes cell survival via dynamic interactions with a vast network of binding partners, many of which are involved in stress regulation. We show here that hypoxia (low glucose and oxygen) ...triggers a rearrangement of the 14-3-3ζ interactome to favor an interaction with the core autophagy regulator Atg9A. Our data suggest that the localization of mammalian Atg9A to autophagosomes requires phosphorylation on the C terminus of Atg9A at S761, which creates a 14-3-3ζ docking site. Under basal conditions, this phosphorylation is maintained at a low level and is dependent on both ULK1 and AMPK. However, upon induction of hypoxic stress, activated AMPK bypasses the requirement for ULK1 and mediates S761 phosphorylation directly, resulting in an increase in 14-3-3ζ interactions, recruitment of Atg9A to LC3-positive autophagosomes, and enhanced autophagosome production. These data suggest a novel mechanism whereby the level of autophagy induction can be modulated by AMPK/ULK1-mediated phosphorylation of mammalian Atg9A.
Abstract
Islands are global hotspots for biodiversity and extinction, representing ~ 5% of Earth’s land area alongside 40% of globally threatened vertebrates and 61% of global extinctions since the ...1500s. Invasive species are the primary driver of native biodiversity loss on islands, though eradication of invasive species from islands has been effective at halting or reversing these trends. A global compendium of this conservation tool is essential for scaling best-practices and enabling innovations to maximize biodiversity outcomes. Here, we synthesize over 100 years of invasive vertebrate eradications from islands, comprising 1550 eradication attempts on 998 islands, with an 88% success rate. We show a significant growth in eradication activity since the 1980s, primarily driven by rodent eradications. The annual number of eradications on islands peaked in the mid-2000s, but the annual area treated continues to rise dramatically. This trend reflects increases in removal efficacy and project complexity, generating increased conservation gains. Our synthesis demonstrates the collective contribution of national interventions towards global biodiversity outcomes. Further investment in invasive vertebrate eradications from islands will expand biodiversity conservation while strengthening biodiversity resilience to climate change and creating co-benefits for human societies.
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