The tropospheric delay acquired by the Global Navigation Position System (GPS) Precise Point Positioning (PPP) is continuous and steady, less affected by rainfall. The Water Vapor Radiometer (WVR) can provide real‐time meteorological parameters but is more sensitive to high‐frequency information in troposphere. To explore the use of WVR‐retrieved tropospheric delay and assist other geodetic techniques for atmospheric correction, the tropospheric delay from WVR and co‐located GPS at Shanghai, Beijing, Kunming, and Urumqi stations in China are compared. For the inconsistent values of WVR‐PPP zenith wet delay, the variations of the tropospheric delay from WVR and GPS before and after the rainfall were statistically analyzed. The results suggest that, for the rain rate ranging from 0.1 to 50 mm/hr, the impact of rainfall on WVR could last from 10 min before to 30 min after the rainfall. With filtering WVR data based on meteorological parameters and rain rate, the zenith wet delay between WVR and PPP at Shanghai shows good consistency, the root mean square (RMS) is 6.11 mm, correlation is 0.997, and the RMS in the other three stations ranges from 16.35 to 25.16 mm (correlation ranges in 0.794–0.951). The analysis indicates that the tropospheric delay of WVR is reliable to be applied to space geodetic techniques correction in real‐time with filtering to reduce the effect of rainfall, water vapor, and liquid water variability. Key Points Comparison of zenith wet delay(ZWD) from water vapor radiometer, co‐located GPS station observations in high temporal resolution Quantitative analysis of the magnitude and duration of rainfall effects on the zenith wet delay from water vapor radiometer and GPS Such data analysis and processing might be valuable for assimilating multi‐source data on tropospheric wet delay