The commercial continuous‐flow streamwise thermal‐gradient cloud condensation nuclei (CCN) counter is widely used in aerosol CCN activity measurements which are critical for investigating aerosol‐cloud interactions. In CCN measurements, a critical threshold is needed for distinguishing interstitial aerosols and activated droplets, and a default threshold of 0.75 μm was set in CCN counter. Theoretically, interstitial aerosols could also grow larger than 0.75 μm in CCN counter at low supersaturations, thus theoretical thresholds derived from the Köhler theory were suggested. Here, we report that droplet growth in the CCN counter is kinetically limited and CCN‐active droplets does not reach their theoretical diameters under low supersaturations. Neglecting the kinetic growth limitation in CCN identification would count less CCN and underestimate the aerosol hygroscopicity parameter κ $\kappa $ by up to 50% for supersaturations lower than 0.1%. We recommend that thresholds considering kinetic limitations should be used as new criteria for CCN identification under low supersaturations. Plain Language Summary Accurate Cloud Condensation Nuclei (CCN) predictions in climate and regional models are crucial for the assessment of climate effects of aerosol‐cloud interactions. Direct measurements of CCN activity, varied by aerosol size, hygroscopicity, and supersaturation, are important for model verifications and improvements. The commercial continuous‐flow streamwise thermal‐gradient CCN counter (CCNC) is widely used in CCN activity measurements. We found that the droplet growth in the CCNC is kinetically limited under low supersaturations (<0.14%), thus not reaching the theoretical critical activation diameter, which significantly affect CCN identification. Kinetic model results revealed that the wet diameter thresholds of CCN identification that took the kinetic limitations of droplet growth into account were independent of dry aerosol size and hygroscopicity thus could be directly used as new criteria for CCN identification. Neglecting the kinetic growth limitation in CCN identification would result in significant bias in CCN activity measurements and thus supersaturated aerosol hygroscopicity retrievals. Findings of this research have significant impacts on CCN activity measurements and supersaturated aerosol hygroscopicity investigations. Key Points Limited hygroscopic growth of cloud condensation nuclei (CCN) in CCN counter is recognized and evaluated based on model analysis Kinetic limitations in CCN counter impacts significantly on size‐resolved CCN activity measurements Kinetic limitations in CCN counter impacts significantly on aerosol hygroscopicity measurements under low supersaturation