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Léveillé, Nicolas; Melo, Carlos A; Rooijers, Koos; Díaz-Lagares, Angel; Melo, Sonia A; Korkmaz, Gozde; Lopes, Rui; Moqadam, Farhad Akbari; Maia, Ana R; Wijchers, Patrick J; Geeven, Geert; den Boer, Monique L; Kalluri, Raghu; de Laat, Wouter; Esteller, Manel; Agami, Reuven
Nature communications, 03/2015, Letnik: 6, Številka: 1Journal Article
p53 binds enhancers to regulate key target genes. Here, we globally mapped p53-regulated enhancers by looking at enhancer RNA (eRNA) production. Intriguingly, while many p53-induced enhancers contained p53-binding sites, most did not. As long non-coding RNAs (lncRNAs) are prominent regulators of chromatin dynamics, we hypothesized that p53-induced lncRNAs contribute to the activation of enhancers by p53. Among p53-induced lncRNAs, we identified LED and demonstrate that its suppression attenuates p53 function. Chromatin-binding and eRNA expression analyses show that LED associates with and activates strong enhancers. One prominent target of LED was located at an enhancer region within CDKN1A gene, a potent p53-responsive cell cycle inhibitor. LED knockdown reduces CDKN1A enhancer induction and activity, and cell cycle arrest following p53 activation. Finally, promoter-associated hypermethylation analysis shows silencing of LED in human tumours. Thus, our study identifies a new layer of complexity in the p53 pathway and suggests its dysregulation in cancer.
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in: SICRIS
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