The aim of this work was to assess the uptake of citrate-coated magnetite nanoparticles (NPs) by wheat plants and its effect on the bioaccumulation and toxicity of individual and joint Cd2+ and Cr6+ levels. Seven-day assays were conducted using quartz sand as the plant growth substrate. The endpoints measured were seed germination, root and shoot lengths, and heavy metal accumulation. Magnetite exhibited very low toxicity, regardless of the wheat seedling NP uptake and distribution into roots and shoots. The seed germination and shoot length were not sensitive enough, while the root length was a more sensitive toxicity endpoint. The root length of wheat seedlings exposed to individual metals decreased by 50% at 2.67mgCd2+kg−1 and 5.53mgCr6+kg−1. However, when magnetite NPs (1000mgkg−1) were added, the root length of the plants increased by 25 and 50%. Cd2+ and Cr6+ showed similar and noninteractive joint action, but strongly impaired the wheat seedlings. In contrast, an interactive infra-additive or antagonistic effect was observed upon adding magnetite NPs. Thus, cadmium and chromium accumulation in vegetable tissues was considerately diminished and the toxicity alleviated. Display omitted •We assessed the effect of nanomagnetite on heavy metal toxicity in wheat plants.•Citrate-coated magnetite nanoparticles (NPs) exerted very low toxicity to plants.•Cadmium was more toxic than chromium and toxicity was mitigated by magnetite NPs.•Cadmium and chromium had a similar and noninteractive joint action on plants.•Metals showed an interactive infra-additive joint effect by adding magnetite NPs.