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  • Automatic detection of syna...
    Buhmann, Julia; Sheridan, Arlo; Malin-Mayor, Caroline; Schlegel, Philipp; Gerhard, Stephan; Kazimiers, Tom; Krause, Renate; Nguyen, Tri M; Heinrich, Larissa; Lee, Wei-Chung Allen; Wilson, Rachel; Saalfeld, Stephan; Jefferis, Gregory S X E; Bock, Davi D; Turaga, Srinivas C; Cook, Matthew; Funke, Jan

    Nature methods, 07/2021, Letnik: 18, Številka: 7
    Journal Article

    We develop an automatic method for synaptic partner identification in insect brains and use it to predict synaptic partners in a whole-brain electron microscopy dataset of the fruit fly. The predictions can be used to infer a connectivity graph with high accuracy, thus allowing fast identification of neural pathways. To facilitate circuit reconstruction using our results, we develop CIRCUITMAP, a user interface add-on for the circuit annotation tool CATMAID.