This dataset represents long-term marginal abatement cost (MAC) curves of all major emission sources of non-CO2 greenhouse gases (GHGs); methane (CH4), nitrous oxide (N2O) and fluorinated gases (HFCs, PFCs and SF6). The work is based on existing short-term MAC curve datasets and recent literature on individual mitigation measures. The data represent a comprehensive set of MAC curves, covering all major non-CO2 emission sources for 26 aggregated world regions. They are suitable for long-term global mitigation scenario development, as dynamical elements (technological progress, removal of implementation barriers) are included. The data is related to the research article: “Long-term marginal abatement cost curves of non-CO2greenhouse gases” 1.