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  • Comparative analysis of IMP...
    Hendrickx, Antoni P A; Schade, Rogier P; Landman, Fabian; Bosch, Thijs; Schouls, Leo M; van Dijk, Karin

    Journal of global antimicrobial resistance., 12/2022, Letnik: 31
    Journal Article

    A recent occurrence of carbapenemase-producing Acinetobacter ursingii was reported in the Netherlands and comprised three unrelated strains carrying the bla and bla encoding genes. The objective was to investigate a putative common source of the carbapenemase resistance genes and plasmids in these A. ursingii strains. Hybrid assembly of short-read and long-read sequencing data was performed using Unicycler and assembled genomes were analysed by ResFinder and PlasmidFinder. Hybrid assemblies of A. ursingii genomes yielded a circular chromosome, a large plasmid harboring bla and bla genes (sizes 259-317kb), and four to five other smaller plasmids. ResFinder analyses revealed 16 other acquired resistance genes on the plasmids carrying the bla and bla genes. These 18 genes encode resistance towards eight antibiotic classes. The smaller plasmids did not carry acquired resistance genes. Comparative analysis showed that the three bla /bla plasmids were similar (61%-83%) and shared 13 to 17 of the 18 resistance genes. BLAST analysis showed that the bla /bla plasmids were not reported before. However, a close match with a 399 kb plasmid from Acinetobacter johnsonii was found (99% similarity, 80% coverage). This A. johnsonii plasmid contains the bla gene, but lacks bla , and it shares eight other resistance genes with those present on the A. ursingii bla /bla plasmids. Three bla /bla -carrying plasmids were characterized in three carbapenemase-producing A. ursingii strains. The plasmids were highly similar, suggesting a putative common source or co-selection of resistance genes from A. johnsonii. These results provide initial insights in the dissemination of carbapenem-resistance in A. ursingii in the Netherlands.