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  • SARS-CoV-2 RNA detected in ...
    Andersson, Monique I.; Arancibia-Carcamo, Carolina V.; Auckland, Kathryn; Baillie, J. Kenneth; Barnes, Eleanor; Beneke, Tom; Bibi, Sagida; Brooks, Tim; Carroll, Miles; Crook, Derrick; Dingle, Kate; Dold, Christina; Downs, Louise O.; Dunn, Laura; Eyre, David W.; Gilbert Jaramillo, Javier; Harvala, Heli; Hoosdally, Sarah; Ijaz, Samreen; James, Tim; James, William; Jeffery, Katie; Justice, Anita; Klenerman, Paul; Knight, Julian C.; Knight, Michael; Liu, Xu; Lumley, Sheila F.; Matthews, Philippa C.; McNaughton, Anna L.; Mentzer, Alexander J.; Mongkolsapaya, Juthathip; Oakley, Sarah; Oliveira, Marta S.; Peto, Timothy; Ploeg, Rutger J.; Ratcliff, Jeremy; Robbins, Melanie J.; Roberts, David J.; Rudkin, Justine; Russell, Rebecca A.; Screaton, Gavin; Semple, Malcolm G.; Skelly, Donal; Simmonds, Peter; Stoesser, Nicole; Turtle, Lance; Wareing, Susan; Zambon, Maria

    Wellcome open research, 2020, Letnik: 5
    Journal Article

    Background: Laboratory diagnosis of SARS-CoV-2 infection (the cause of COVID-19) uses PCR to detect viral RNA (vRNA) in respiratory samples. SARS-CoV-2 RNA has also been detected in other sample types, but there is limited understanding of the clinical or laboratory significance of its detection in blood. Methods: We undertook a systematic literature review to assimilate the evidence for the frequency of vRNA in blood, and to identify associated clinical characteristics. We performed RT-PCR in serum samples from a UK clinical cohort of acute and convalescent COVID-19 cases (n=212), together with convalescent plasma samples collected by NHS Blood and Transplant (NHSBT) (n=462 additional samples). To determine whether PCR-positive blood samples could pose an infection risk, we attempted virus isolation from a subset of RNA-positive samples. Results: We identified 28 relevant studies, reporting SARS-CoV-2 RNA in 0-76% of blood samples; pooled estimate 10% (95%CI 5-18%). Among serum samples from our clinical cohort, 27/212 (12.7%) had SARS-CoV-2 RNA detected by RT-PCR. RNA detection occurred in samples up to day 20 post symptom onset, and was associated with more severe disease (multivariable odds ratio 7.5). Across all samples collected ≥28 days post symptom onset, 0/494 (0%, 95%CI 0-0.7%) had vRNA detected. Among our PCR-positive samples, cycle threshold (ct) values were high (range 33.5-44.8), suggesting low vRNA copy numbers. PCR-positive sera inoculated into cell culture did not produce any cytopathic effect or yield an increase in detectable SARS-CoV-2 RNA. There was a relationship between RT-PCR negativity and the presence of total SARS-CoV-2 antibody (p=0.02). Conclusions: vRNA was detectable at low viral loads in a minority of serum samples collected in acute infection, but was not associated with infectious SARS-CoV-2 (within the limitations of the assays used). This work helps to inform biosafety precautions for handling blood products from patients with current or previous COVID-19.