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  • GPSuc: Global Prediction of... GPSuc: Global Prediction of Generic and Species-specific Succinylation Sites by aggregating multiple sequence features
    Hasan, Md Mehedi; Kurata, Hiroyuki PloS one, 10/2018, Volume: 13, Issue: 10
    Journal Article
    Peer reviewed
    Open access

    Lysine succinylation is one of the dominant post-translational modification of the protein that contributes to many biological processes including cell cycle, growth and signal transduction pathways. ...
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  • iUmami-SCM: A Novel Sequenc... iUmami-SCM: A Novel Sequence-Based Predictor for Prediction and Analysis of Umami Peptides Using a Scoring Card Method with Propensity Scores of Dipeptides
    Charoenkwan, Phasit; Yana, Janchai; Nantasenamat, Chanin ... Journal of chemical information and modeling, 12/2020, Volume: 60, Issue: 12
    Journal Article
    Peer reviewed

    Umami or the taste of monosodium glutamate represents one of the major attractive taste modalities in humans. Therefore, knowledge about biophysical and biochemical properties of the umami taste is ...
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  • iDPPIV-SCM: A Sequence-Base... iDPPIV-SCM: A Sequence-Based Predictor for Identifying and Analyzing Dipeptidyl Peptidase IV (DPP-IV) Inhibitory Peptides Using a Scoring Card Method
    Charoenkwan, Phasit; Kanthawong, Sakawrat; Nantasenamat, Chanin ... Journal of proteome research, 10/2020, Volume: 19, Issue: 10
    Journal Article
    Peer reviewed

    The inhibition of dipeptidyl peptidase IV (DPP-IV, E.C.3.4.14.5) is well recognized as a new avenue for the treatment of Type 2 diabetes (T2D). Until now, peptide-like DDP-IV inhibitors have been ...
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  • HLPpred-Fuse: improved and ... HLPpred-Fuse: improved and robust prediction of hemolytic peptide and its activity by fusing multiple feature representation
    Hasan, Md Mehedi; Schaduangrat, Nalini; Basith, Shaherin ... Bioinformatics, 06/2020, Volume: 36, Issue: 11
    Journal Article
    Peer reviewed

    Abstract Motivation Therapeutic peptides failing at clinical trials could be attributed to their toxicity profiles like hemolytic activity, which hamper further progress of peptides as drug ...
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  • BengaliNet: A Low-Cost Nove... BengaliNet: A Low-Cost Novel Convolutional Neural Network for Bengali Handwritten Characters Recognition
    Sayeed, Abu; Shin, Jungpil; Hasan, Md. Al Mehedi ... Applied Sciences, 08/2021, Volume: 11, Issue: 15
    Journal Article
    Peer reviewed
    Open access

    As it is the seventh most-spoken language and fifth most-spoken native language in the world, the domain of Bengali handwritten character recognition has fascinated researchers for decades. Although ...
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  • i6mA-Fuse: improved and rob... i6mA-Fuse: improved and robust prediction of DNA 6 mA sites in the Rosaceae genome by fusing multiple feature representation
    Hasan, Md. Mehedi; Manavalan, Balachandran; Shoombuatong, Watshara ... Plant molecular biology, 05/2020, Volume: 103, Issue: 1-2
    Journal Article
    Peer reviewed

    DNA N 6 -methyladenine (6 mA) is one of the most vital epigenetic modifications and involved in controlling the various gene expression levels. With the avalanche of DNA sequences generated in ...
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  • iBitter-SCM: Identification... iBitter-SCM: Identification and characterization of bitter peptides using a scoring card method with propensity scores of dipeptides
    Charoenkwan, Phasit; Yana, Janchai; Schaduangrat, Nalini ... Genomics (San Diego, Calif.), July 2020, 2020-07-00, Volume: 112, Issue: 4
    Journal Article
    Peer reviewed

    In general, hydrolyzed proteins, plant-derived alkaloids and toxins displays unpleasant bitter taste. Thus, the perception of bitter taste plays a crucial role in protecting animals from poisonous ...
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  • i4mC-ROSE, a bioinformatics... i4mC-ROSE, a bioinformatics tool for the identification of DNA N4-methylcytosine sites in the Rosaceae genome
    Hasan, Md. Mehedi; Manavalan, Balachandran; Khatun, Mst. Shamima ... International journal of biological macromolecules, 08/2020, Volume: 157
    Journal Article
    Peer reviewed

    One of the most important epigenetic modifications is N4-methylcytosine, which regulates many biological processes including DNA replication and chromosome stability. Identification of ...
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  • Improved prediction and cha... Improved prediction and characterization of anticancer activities of peptides using a novel flexible scoring card method
    Charoenkwan, Phasit; Chiangjong, Wararat; Lee, Vannajan Sanghiran ... Scientific reports, 02/2021, Volume: 11, Issue: 1
    Journal Article
    Peer reviewed
    Open access

    As anticancer peptides (ACPs) have attracted great interest for cancer treatment, several approaches based on machine learning have been proposed for ACP identification. Although existing methods ...
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  • Computational Identificatio... Computational Identification of Protein Pupylation Sites by Using Profile-Based Composition of k-Spaced Amino Acid Pairs
    Hasan, Md Mehedi; Zhou, Yuan; Lu, Xiaotian ... PloS one, 06/2015, Volume: 10, Issue: 6
    Journal Article
    Peer reviewed
    Open access

    Prokaryotic proteins are regulated by pupylation, a type of post-translational modification that contributes to cellular function in bacterial organisms. In pupylation process, the prokaryotic ...
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