The optical design and performance of the recently opened 13A biological small‐angle X‐ray scattering (SAXS) beamline at the 3.0 GeV Taiwan Photon Source of the National Synchrotron Radiation ...Research Center are reported. The beamline is designed for studies of biological structures and kinetics in a wide range of length and time scales, from angstrom to micrometre and from microsecond to minutes. A 4 m IU24 undulator of the beamline provides high‐flux X‐rays in the energy range 4.0–23.0 keV. MoB4C double‐multilayer and Si(111) double‐crystal monochromators (DMM/DCM) are combined on the same rotating platform for a smooth rotation transition from a high‐flux beam of ∼4 × 1014 photons s−1 to a high‐energy‐resolution beam of ΔE/E ≃ 1.5 × 10−4; both modes share a constant beam exit. With a set of Kirkpatrick–Baez (KB) mirrors, the X‐ray beam is focused to the farthest SAXS detector position, 52 m from the source. A downstream four‐bounce crystal collimator, comprising two sets of Si(311) double crystals arranged in a dispersive configuration, optionally collimate the DCM (vertically diffracted) beam in the horizontal direction for ultra‐SAXS with a minimum scattering vector q down to 0.0004 Å−1, which allows resolving ordered d‐spacing up to 1 µm. A microbeam, of 10–50 µm beam size, is tailored by a combined set of high‐heat‐load slits followed by micrometre‐precision slits situated at the front‐end 15.5 m position. The second set of KB mirrors then focus the beam to the 40 m sample position, with a demagnification ratio of ∼1.5. A detecting system comprising two in‐vacuum X‐ray pixel detectors is installed to perform synchronized small‐ and wide‐angle X‐ray scattering data collections. The observed beamline performance proves the feasibility of having compound features of high flux, microbeam and ultra‐SAXS in one beamline.
The optical design and performance of the BioSAXS beamline at the Taiwan Photon Source are reported
Researchers have indicated that the collaborative problem‐solving space afforded by the collaborative systems significantly impact the problem‐solving process. However, recent investigations into ...collaborative simulations, which allow a group of students to jointly manipulate a problem in a shared problem space, have yielded divergent results regarding their effects on collaborative learning. Hence, this study analysed how students solved a physics problem using individual‐based and collaborative simulations to understand their effects on science learning. Multiple data sources including group discourse, problem‐solving activities, learning test scores, and questionnaire feedback were analysed. Lag sequential analysis on the data found that students using the two simulations collaborated with peers to solve the problem in significantly different patterns. The students using the collaborative simulations demonstrated active engagement in the collaborative activity; however, they did not transform discussions into workable problem‐solving activities. The students using the individual‐based simulation showed a lower level of collaboration engagement, starting with individual exploration of the problem with the simulation, followed by group reflection. The two groups also showed significant differences in their learning test scores. The findings and pedagogical suggestions are discussed in the hope of addressing critical activity design issues in using computer simulations for facilitating collaborative learning.
Lay Description
What is currently known about the subject matter?
Students tend to solve problems with simulations individually rather than collaboratively.
The free‐riding effect impedes student engagement in the collaborative process.
Collaborative simulations offer new affordances to better facilitate CPS processes.
What their paper adds to this?
Collaborative simulations strengthen interdependence and engagement in collaboration.
However, students did not show a significant enhancement in the learning tests.
They had difficulties transforming discussions into workable problem‐solving actions.
What the implications of study findings for practitioners?
Collaborative simulations can be applied to enhance collaborative engagement.
CPS activities should carefully leverage individual and collaborative learning.
Prompts that help students to closely relate their discussion to the simulation are needed.
Soybean plants showing symptoms of root rot were collected from fields in western Canada to determine the etiology of the disease. Four Fusarium spp., Fusarium avenaceum, Fusarium culmorum, Fusarium ...oxysporum and Fusarium proliferatum, were identified based on their cultural and morphological characteristics. All of the isolates of these species were pathogenic on soybean. Identification of F. proliferatum was confirmed by PCR analysis with the F. proliferatum-specific primer set CLPRO1/CLPRO2. Amplicons of the target fragments (partial calmodulin (cld) gene, 526 bp) were obtained only from DNA of isolates tentatively identified as F. proliferatum, and sequencing of the amplicon showed it shared 100% identity with the cld gene sequences of F. proliferatum in GenBank. F. proliferatum was the most aggressive of the four Fusarium species identified, causing the greatest root rot severity and reduction of seedling emergence. F. avenaceum was the second most aggressive and caused a greater reduction in seedling numbers than F. culmorum or F. oxysporum. Correlation analysis showed that seedling emergence, shoot dry weight, and seed yield decreased, and root rot severity increased, with the log of inoculum density of F. proliferatum. This is the first report of F. proliferatum causing soybean root rot in Canada.
•Four Fusarium species were identified in a soybean root rot survey in western Canada.•Fusarium proliferatum was the most aggressive pathogen of these species.•This is the first report of F. proliferatum causing soybean root rot in Canada.•Soybean growth decreased and disease increased, as F. proliferatum multiplied.
Isolates of Fusarium spp. were recovered from the roots of field pea (Pisum sativum) collected from 15 commercial fields in Alberta, Canada. Most of the isolates (75 out of 96) were identified as F. ...avenaceum, based on morphology, phylogeny and species-specific PCR amplification. Molecular differences in the F. avenaceum isolates were detected based on putative mating type, and on ITS and CPN60 sequences. MAT-1 and MAT-2 were equally distributed among the isolates. Phylogenetic analysis based on ITS and CPN60 sequences clustered most of the F. avenaceum isolates into a single group. In some cases, isolates with low aggressiveness clustered together in additional groups. There was no correlation between phylogenetic profile and either mating type or geographic origin. This population of F. avenaceum has a low level of genetic variation and consists of isolates derived from the two mating types. Isolates with low aggressiveness are also retained in the population.
Bermond, Comellas and Hsu gave an excellent survey on multi-loop networks, directed and undirected, in 1995, but only one and half page is on loop networks other than the directed double-loop. Hwang ...recently gave a substantial survey, but only on the directed double-loop. This survey is a companion of the latter survey by focusing on the other loop networks.
We report on the development of foam-based double-layer targets (DLTs) for laser-driven ion acceleration. Foam layers with a density of a few mg cm−3 and controlled thickness in the 8-36 μm range ...were grown on μm-thick Al foils by pulsed laser deposition (PLD). The DLTs were experimentally investigated by varying the pulse intensity, laser polarisation and target properties. Comparing DLTs with simple Al foils, we observed a systematic enhancement of the maximum and average energies and number of accelerated ions. Maximum energies up to 30 MeV for protons and 130 MeV for C6+ ions were detected. Dedicated three-dimensional particle-in-cell (3D-PIC) simulations were performed considering both uniform and cluster-assembled foams to interpret the effect of the foam nanostructure on the acceleration process.
IkappaB kinases (IKKs) IKK1 and IKK2 are two putative IkappaBalpha kinases involved in NF-kappaB activation. To examine the in vivo functions of IKK1, we generated IKK1-deficient mice. The mutant ...mice are perinatally lethal and exhibit a wide range of developmental defects. Newborn mutant mice have shiny, taut, and sticky skin without whiskers. Histological analysis shows thicker epidermis, which is unable to differentiate. Limbs and tail are wrapped inside the skin and do not extend properly out of the body trunk. Skeleton staining reveals a cleft secondary palate, split sternebra 6, and deformed incisors. NF-kappaB activation mediated by TNFalpha and IL-1 is diminished in IKK1-deficient mouse embryonic fibroblast (MEF) cells. The IKK complex in the absence of IKK1 is capable of phosphorylating IkappaBalpha and IkappaBbeta in vitro. Our results support a role for IKK1 in NF-kappaB activation and uncover its involvement in skin and skeleton development. We conclude further that the two related kinases IKK1 and IKK2 have distinct functions and can not be substituted for each other's functions.
Bean anthracnose is a seedborne disease of common bean (Phaseolus vulgaris) caused by the fungal pathogen Colletotrichum lindemuthianum. Using seed that did not test positive for the pathogen has ...been proven to be an effective strategy for bean anthracnose control. To quantify the extent of anthracnose seed infection, a real‐time PCR‐based diagnostic assay was developed for detecting C. lindemuthianum in seeds of the commercial bean class navy bean. The ribosomal DNA (rDNA) region consisting of part of the18S rDNA, 5.8S rDNA, internal transcribed spacers (ITS) 1, 2 and part of the 28S rDNA of seven races of C. lindemuthianum, 21 isolates of Colletotrichum species and nine other bean pathogens were sequenced with the universal primer set ITS5/ITS4. Based on the aligned sequence matrix, one primer set and a probe were designed for a SYBR Green dye assay and a TaqMan MGB (minor groove binder) assay. The primer set was demonstrated to be specific for C. lindemuthianum and showed a high sensitivity for the target pathogen. The detection limit of both assays was 5 fg of C. lindemuthianum genomic DNA. To explore the correlation between the lesion area and the DNA amount of C. lindemuthianum in bean seed, seeds of the navy bean cultivar Navigator with lesions of different sizes, as well as symptomless seeds, were used in both real‐time PCR assays.
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