NUK - logo
E-resources
Full text
Peer reviewed Open access
  • Transcriptomics of MASLD Pa...
    Mondal, Tanmoy; Smith, Coleman I; Loffredo, Christopher A; Quartey, Ruth; Moses, Gemeyel; Howell, Charles D; Korba, Brent; Kwabi-Addo, Bernard; Nunlee-Bland, Gail; R Rucker, Leanna; Johnson, Jheannelle; Ghosh, Somiranjan

    International journal of molecular sciences, 12/2023, Volume: 24, Issue: 23
    Journal Article

    Metabolic-dysfunction-associated steatotic liver disease (MASLD) is becoming the most common chronic liver disease worldwide and is of concern among African Americans (AA) in the United States. This pilot study evaluated the differential gene expressions and identified the signature genes in the disease pathways of AA individuals with MASLD. Blood samples were obtained from MASLD patients ( = 23) and non-MASLD controls ( = 24) along with their sociodemographic and medical details. Whole-blood transcriptomic analysis was carried out using Affymetrix Clarion-S Assay. A validation study was performed utilizing TaqMan Arrays coupled with Ingenuity Pathway Analysis (IPA) to identify the major disease pathways. Out of 21,448 genes in total, 535 genes (2.5%) were significantly ( < 0.05) and differentially expressed when we compared the cases and controls. A significant overlap in the predominant differentially expressed genes and pathways identified in previous studies using hepatic tissue was observed. Of note, and genes were upregulated, and was downregulated significantly. is the top canonical pathway, and its corresponding biofunction contributes to the development of . The findings address the knowledge gaps regarding how signature genes and functional pathways can be detected in blood samples ('liquid biopsy') in AA MASLD patients, demonstrating the potential of the blood samples as an alternative non-invasive source of material for future studies.