ABSTRACT
The absence of Type IIP core-collapse supernovae arising from progenitors above 17 solar masses suggests the existence of another evolutionary path by which massive stars end their lives. ...The direct collapse of a stellar core to a black hole without the production of a bright, explosive transient is expected to produce a long-lived, dim, red transient known as a failed supernova. Despite the detection of a number of candidates for disappearing massive stars in recent years, conclusive observational evidence for failed supernovae remains elusive. A custom-built pipeline designed for the detection of faint transients is used to re-analyse 10 yr of observations of 231 nearby galaxies from the PTF/ZTF surveys. This analysis recovers known supernovae, and yields a number of interesting transients. However, none of these are consistent with a failed supernova. Through Monte Carlo tests the recovery efficiency of our pipeline is quantified. By assuming failed supernovae occur as a Poissonian process with zero detections in the data set, 95 per cent upper limits to the rate of failed supernovae are calculated as a function of failed supernova absolute magnitude. We estimate failed supernovae to be less than 0.61, 0.33, 0.26, or 0.23 of the core-collapse SN rate for absolute magnitudes of −11, −12, −13, and −14, respectively. Finally, we show that if they exist, the Vera C. Rubin Observatory will find 1.7–3.7 failed SNe per year for an absolute bolometric luminosity of ∼6 × 1039 erg s−1 out to distances of 33–43 Mpc, depending on their assumed spectral energy distribution.
Indigenous microbiota are an essential component in the modern concept of human health, but the composition and functional characteristics of a healthy microbiome remain to be precisely defined. ...Patterns of microbial colonization associated with disease states have been documented, but the health-associated microbial patterns and their functional characteristics are less clear. A healthy microbiome, considered in the context of body habitat or body site, could be described in terms of ecologic stability (i.e., ability to resist community structure change under stress or to rapidly return to baseline following a stress-related change), by an idealized (presumably health-associated) composition or by a desirable functional profile (including metabolic and trophic provisions to the host). Elucidation of the properties of healthy microbiota would provide a target for dietary interventions and/or microbial modifications aimed at sustaining health in generally healthy populations and improving the health of individuals exhibiting disrupted microbiota and associated diseases.
Literature data are collated for 38 stripped-envelope core-collapse supernovae (SE SNe; i.e. SNe IIb, Ib, Ic and Ic-BL) that have good light-curve coverage in more than one optical band. Using ...bolometric corrections derived in previous work, the bolometric light curve of each SN is recovered and template bolometric light curves provided. Peak light distributions and decay rates are investigated; SNe subtypes are not cleanly distinguished in this parameter space, although some grouping of types does occur and there is a suggestion of a Phillips-like relation for most SNe Ic-BL. The bolometric light curves are modelled with a simple analytical prescription and compared to results from more detailed modelling. Distributions of the explosion parameters show the extreme nature of SNe Ic-BL in terms of their 56Ni mass and the kinetic energy, however ejected masses are similar to other subtypes. SNe Ib and Ic have very similar distributions of explosion parameters, indicating a similarity in progenitors. SNe IIb are the most homogeneous subtype and have the lowest average values for 56Ni mass, ejected mass, and kinetic energy. Ejecta masses for each subtype and SE SNe as a whole are inconsistent with those expected from very massive stars. The majority of the ejecta mass distribution is well described by more moderately massive progenitors in binaries, indicating these are the dominant progenitor channel for SE SNe.
Many existing cohorts contain a range of relatedness between genotyped individuals, either by design or by chance. Haplotype estimation in such cohorts is a central step in many downstream analyses. ...Using genotypes from six cohorts from isolated populations and two cohorts from non-isolated populations, we have investigated the performance of different phasing methods designed for nominally 'unrelated' individuals. We find that SHAPEIT2 produces much lower switch error rates in all cohorts compared to other methods, including those designed specifically for isolated populations. In particular, when large amounts of IBD sharing is present, SHAPEIT2 infers close to perfect haplotypes. Based on these results we have developed a general strategy for phasing cohorts with any level of implicit or explicit relatedness between individuals. First SHAPEIT2 is run ignoring all explicit family information. We then apply a novel HMM method (duoHMM) to combine the SHAPEIT2 haplotypes with any family information to infer the inheritance pattern of each meiosis at all sites across each chromosome. This allows the correction of switch errors, detection of recombination events and genotyping errors. We show that the method detects numbers of recombination events that align very well with expectations based on genetic maps, and that it infers far fewer spurious recombination events than Merlin. The method can also detect genotyping errors and infer recombination events in otherwise uninformative families, such as trios and duos. The detected recombination events can be used in association scans for recombination phenotypes. The method provides a simple and unified approach to haplotype estimation, that will be of interest to researchers in the fields of human, animal and plant genetics.
Exciton-polaritons are hybrid light-matter quasiparticles formed by strongly interacting photons and excitons (electron-hole pairs) in semiconductor microcavities. They have emerged as a robust ...solid-state platform for next-generation optoelectronic applications as well as for fundamental studies of quantum many-body physics. Importantly, exciton-polaritons are a profoundly open (that is, non-Hermitian) quantum system, which requires constant pumping of energy and continuously decays, releasing coherent radiation. Thus, the exciton-polaritons always exist in a balanced potential landscape of gain and loss. However, the inherent non-Hermitian nature of this potential has so far been largely ignored in exciton-polariton physics. Here we demonstrate that non-Hermiticity dramatically modifies the structure of modes and spectral degeneracies in exciton-polariton systems, and, therefore, will affect their quantum transport, localization and dynamical properties. Using a spatially structured optical pump, we create a chaotic exciton-polariton billiard--a two-dimensional area enclosed by a curved potential barrier. Eigenmodes of this billiard exhibit multiple non-Hermitian spectral degeneracies, known as exceptional points. Such points can cause remarkable wave phenomena, such as unidirectional transport, anomalous lasing/absorption and chiral modes. By varying parameters of the billiard, we observe crossing and anti-crossing of energy levels and reveal the non-trivial topological modal structure exclusive to non-Hermitian systems. We also observe mode switching and a topological Berry phase for a parameter loop encircling the exceptional point. Our findings pave the way to studies of non-Hermitian quantum dynamics of exciton-polaritons, which may uncover novel operating principles for polariton-based devices.
Crohn's disease (CD) is an inflammatory bowel disease of complex etiology, although dysbiosis of the gut microbiota has been implicated in chronic immune-mediated inflammation associated with CD. ...Here we combined shotgun metagenomic and metaproteomic approaches to identify potential functional signatures of CD in stool samples from six twin pairs that were either healthy, or that had CD in the ileum (ICD) or colon (CCD). Integration of these omics approaches revealed several genes, proteins, and pathways that primarily differentiated ICD from healthy subjects, including depletion of many proteins in ICD. In addition, the ICD phenotype was associated with alterations in bacterial carbohydrate metabolism, bacterial-host interactions, as well as human host-secreted enzymes. This eco-systems biology approach underscores the link between the gut microbiota and functional alterations in the pathophysiology of Crohn's disease and aids in identification of novel diagnostic targets and disease specific biomarkers.
ABSTRACT Nebular-phase observations and spectral models of Type Ic superluminous supernovae (SLSNe) are presented. LSQ14an and SN 2015bn both display late-time spectra similar to galaxy-subtracted ...spectra of SN 2007bi, and the class shows strong similarity with broad-lined SNe Ic such as SN 1998bw. Near-infrared observations of SN 2015bn show a strong Ca ii triplet, O i 9263, O i 1.13 m, and Mg i 1.50 m, but no distinct He, Si, or S emission. The high Ca ii NIR/Ca ii 7291, 7323 ratio of ∼2 indicates a high electron density of cm−3. Spectral models of oxygen-zone emission are investigated to put constraints on the emitting region. Models require M to produce enough O i 6300, 6364 luminosity, irrespective of the powering situation and the density. The high oxygen-zone mass, supported by high estimated magnesium masses, points to explosions of massive CO cores, requiring . Collisions of pair-instability pulsations do not provide enough mass to account for the emission. O ii and O iii lines emerge naturally in many models, which strengthens the identification of broad O ii 7320, 7330, O iii 4363, and O iii 4959, 5007 in some spectra. A small filling factor for the O/Mg zone is needed to produce enough luminosity in Mg i 4571, Mg i 1.504 m, and O i recombination lines, which shows that the ejecta is clumped. We review the constraints from the nebular spectral modeling in the context of the various scenarios proposed for SLSNe.
PDF
