Fire activity in Australia is strongly affected by high inter-annual climate variability and extremes. Through changes in the climate, anthropogenic climate change has the potential to alter fire ...dynamics. Here we compile satellite (19 and 32 years) and ground-based (90 years) burned area datasets, climate and weather observations, and simulated fuel loads for Australian forests. Burned area in Australia's forests shows a linear positive annual trend but an exponential increase during autumn and winter. The mean number of years since the last fire has decreased consecutively in each of the past four decades, while the frequency of forest megafire years (>1 Mha burned) has markedly increased since 2000. The increase in forest burned area is consistent with increasingly more dangerous fire weather conditions, increased risk factors associated with pyroconvection, including fire-generated thunderstorms, and increased ignitions from dry lightning, all associated to varying degrees with anthropogenic climate change.
With the eddy covariance (EC) technique, net fluxes of carbon dioxide (CO.sub.2) and other trace gases as well as water and energy fluxes can be measured at the ecosystem level. These flux ...measurements are a main source for understanding biosphere-atmosphere interactions and feedbacks through cross-site analysis, model-data integration, and upscaling. The raw fluxes measured with the EC technique require extensive and laborious data processing. While there are standard tools.sup.1 available in an open-source environment for processing high-frequency (10 or 20 Hz) data into half-hourly quality-checked fluxes, there is a need for more usable and extensible tools for the subsequent post-processing steps. We tackled this need by developing the REddyProc package in the cross-platform language R that provides standard CO.sub.2 -focused post-processing routines for reading (half-)hourly data from different formats, estimating the u.sub.* threshold, as well as gap-filling, flux-partitioning, and visualizing the results. In addition to basic processing, the functions are extensible and allow easier integration in extended analysis than current tools. New features include cross-year processing and a better treatment of uncertainties. A comparison of REddyProc routines with other state-of-the-art tools resulted in no significant differences in monthly and annual fluxes across sites. Lower uncertainty estimates of both u.sub.* and resulting gap-filled fluxes by 50 % with the presented tool were achieved by an improved treatment of seasons during the bootstrap analysis. Higher estimates of uncertainty in daytime partitioning (about twice as high) resulted from a better accounting for the uncertainty in estimates of temperature sensitivity of respiration. The provided routines can be easily installed, configured, and used. Hence, the eddy covariance community will benefit from the REddyProc package, allowing easier integration of standard post-processing with extended analysis.
Ecosystem water-use efficiency (WUE) is an important metric linking the global land carbon and water cycles. Eddy covariance-based estimates of WUE in temperate/boreal forests have recently been ...found to show a strong and unexpected increase over the 1992–2010 period, which has been attributed to the effects of rising atmospheric CO2 concentrations on plant physiology.
To test this hypothesis, we forced the observed trend in the process-based land surface model JSBACH by increasing the sensitivity of stomatal conductance (g
s) to atmospheric CO2 concentration. We compared the simulated continental discharge, evapotranspiration (ET), and the seasonal CO2 exchange with observations across the extratropical northern hemisphere.
The increased simulated WUE led to substantial changes in surface hydrology at the continental scale, including a significant decrease in ET and a significant increase in continental runoff, both of which are inconsistent with large-scale observations. The simulated seasonal amplitude of atmospheric CO2 decreased over time, in contrast to the observed upward trend across ground-based measurement sites.
Our results provide strong indications that the recent, large-scale WUE trend is considerably smaller than that estimated for these forest ecosystems. They emphasize the decreasing CO2 sensitivity of WUE with increasing scale, which affects the physiological interpretation of changes in ecosystem WUE.
We present the R package bigleaf (version 0.6.5), an open source toolset for the derivation of meteorological, aerodynamic, and physiological ecosystem properties from eddy covariance (EC) flux ...observations and concurrent meteorological measurements. A 'big-leaf' framework, in which vegetation is represented as a single, uniform layer, is employed to infer bulk ecosystem characteristics top-down from the measured fluxes. Central to the package is the calculation of a bulk surface/canopy conductance (Gs/Gc) and a bulk aerodynamic conductance (Ga), with the latter including formulations for the turbulent and canopy boundary layer components. The derivation of physical land surface characteristics such as surface roughness parameters, wind profile, aerodynamic and radiometric surface temperature, surface vapor pressure deficit (VPD), potential evapotranspiration (ET), imposed and equilibrium ET, as well as vegetation-atmosphere decoupling coefficients, is described. The package further provides calculation routines for physiological ecosytem properties (stomatal slope parameters, stomatal sensitivity to VPD, bulk intercellular CO2 concentration, canopy photosynthetic capacity), energy balance characteristics (closure, biochemical energy), ancillary meteorological variables (psychrometric constant, saturation vapor pressure, air density, etc.), customary unit interconversions and data filtering. The target variables can be calculated with a different degree of complexity, depending on the amount of available site-specific information. The utilities of the package are demonstrated for three single-level (above-canopy) eddy covariance sites representing a temperate grassland, a temperate needle-leaf forest, and a Mediterranean evergreen broadleaf forest. The routines are further tested for a two-level EC site (tree and grass layer) located in a Mediterranean oak savanna. The limitations and the ecophysiological interpretation of the derived ecosystem properties are discussed and practical guidelines are given. The package provides the basis for a consistent, physically sound, and reproducible characterization of biometeorological conditions and ecosystem physiology, and is applicable to EC sites across vegetation types and climatic conditions with minimal ancillary data requirements.
The terrestrial carbon and water cycles are intimately linked: the carbon cycle is driven by photosynthesis, while the water balance is dominated by transpiration, and both fluxes are controlled by ...plant stomatal conductance. The ratio between these fluxes, the plant water-use efficiency (WUE), is a useful indicator of vegetation function.
WUE can be estimated using several techniques, including leaf gas exchange, stable isotope discrimination, and eddy covariance. Here we compare global compilations of data for each of these three techniques.
We show that patterns of variation in WUE across plant functional types (PFTs) are not consistent among the three datasets. Key discrepancies include the following: leaf-scale data indicate differences between needleleaf and broadleaf forests, but ecosystem-scale data do not; leaf-scale data indicate differences between C3 and C4 species, whereas at ecosystem scale there is a difference between C3 and C4 crops but not grasslands; and isotope-based estimates of WUE are higher than estimates based on gas exchange for most PFTs.
Our study quantifies the uncertainty associated with different methods of measuring WUE, indicates potential for bias when using WUE measures to parameterize or validate models, and indicates key research directions needed to reconcile alternative measures of WUE.
Intrinsic water‐use efficiency (iWUE) characterizes the physiological control on the simultaneous exchange of water and carbon dioxide in terrestrial ecosystems. Knowledge of iWUE is commonly gained ...from leaf‐level gas exchange measurements, which are inevitably restricted in their spatial and temporal coverage. Flux measurements based on the eddy covariance (EC) technique can overcome these limitations, as they provide continuous and long‐term records of carbon and water fluxes at the ecosystem scale. However, vegetation gas exchange parameters derived from EC data are subject to scale‐dependent and method‐specific uncertainties that compromise their ecophysiological interpretation as well as their comparability among ecosystems and across spatial scales. Here, we use estimates of canopy conductance and gross primary productivity (GPP) derived from EC data to calculate a measure of iWUE (G1, “stomatal slope”) at the ecosystem level at six sites comprising tropical, Mediterranean, temperate, and boreal forests. We assess the following six mechanisms potentially causing discrepancies between leaf and ecosystem‐level estimates of G1: (i) non‐transpirational water fluxes; (ii) aerodynamic conductance; (iii) meteorological deviations between measurement height and canopy surface; (iv) energy balance non‐closure; (v) uncertainties in net ecosystem exchange partitioning; and (vi) physiological within‐canopy gradients. Our results demonstrate that an unclosed energy balance caused the largest uncertainties, in particular if it was associated with erroneous latent heat flux estimates. The effect of aerodynamic conductance on G1 was sufficiently captured with a simple representation. G1 was found to be less sensitive to meteorological deviations between canopy surface and measurement height and, given that data are appropriately filtered, to non‐transpirational water fluxes. Uncertainties in the derived GPP and physiological within‐canopy gradients and their implications for parameter estimates at leaf and ecosystem level are discussed. Our results highlight the importance of adequately considering the sources of uncertainty outlined here when EC‐derived water‐use efficiency is interpreted in an ecophysiological context.
The intrinsic water‐use efficiency (iWUE) metric G1 inferred from eddy covariance measurements is affected by confounding physical and methodological factors (1–6) to a different extent. Meteorological deviations between measurement height and canopy surface (4), the NEE‐partitioning approach (5) and possible physiological within‐canopy gradients (6) are generally less critical for the accurate estimation of intrinsic WUE at the ecosystem level than non‐transpirational water fluxes (1), aerodynamic resistance (2) or the energy balance non‐closure (3).
Mesophyll conductance (gm) is known to affect plant photosynthesis. However, gm is rarely explicitly considered in land surface models (LSMs), with the consequence that its role in ecosystem and ...large‐scale carbon and water fluxes is poorly understood. In particular, the different magnitudes of gm across plant functional types (PFTs) are expected to cause spatially divergent vegetation responses to elevated CO2 concentrations. Here, an extensive literature compilation of gm across major vegetation types is used to parameterize an empirical model of gm in the LSM JSBACH and to adjust photosynthetic parameters based on simulated An − Ci curves. We demonstrate that an explicit representation of gm changes the response of photosynthesis to environmental factors, which cannot be entirely compensated by adjusting photosynthetic parameters. These altered responses lead to changes in the photosynthetic sensitivity to atmospheric CO2 concentrations which depend both on the magnitude of gm and the climatic conditions, particularly temperature. We then conducted simulations under ambient and elevated (ambient + 200 μmol/mol) CO2 concentrations for contrasting ecosystems and for historical and anticipated future climate conditions (representative concentration pathways; RCPs) globally. The gm‐explicit simulations using the RCP8.5 scenario resulted in significantly higher increases in gross primary productivity (GPP) in high latitudes (+10% to + 25%), intermediate increases in temperate regions (+5% to + 15%), and slightly lower to moderately higher responses in tropical regions (−2% to +5%), which summed up to moderate GPP increases globally. Similar patterns were found for transpiration, but with a lower magnitude. Our results suggest that the effect of an explicit representation of gm is most important for simulated carbon and water fluxes in the boreal zone, where a cold climate coincides with evergreen vegetation.
We make use of an extensive literature compilation of gm across major vegetation types to implement an empirical representation of gm into the land surface model JSBACH and investigate its effects on carbon and water fluxes at the leaf to global scales. We show that gm changes the response of photosynthesis to environmental factors, which leads to an altered photosynthetic sensitivity to CO2 depending on both the magnitude of gm and climatic conditions. Globally, gm caused considerable increases in gross primary productivity of +5% to +15% in the boreal zone, but only minor changes (−2% to +5%) in the tropics.
The observed global net land carbon sink is captured by current land models. All models agree that atmospheric CO2 and nitrogen deposition driven gains in carbon stocks are partially offset by ...climate and land-use and land-cover change (LULCC) losses. However, there is a lack of consensus in the partitioning of the sink between vegetation and soil, where models do not even agree on the direction of change in carbon stocks over the past 60 years. This uncertainty is driven by plant productivity, allocation, and turnover response to atmospheric CO2 (and to a smaller extent to LULCC), and the response of soil to LULCC (and to a lesser extent climate). Overall, differences in turnover explain ~70% of model spread in both vegetation and soil carbon changes. Further analysis of internal plant and soil (individual pools) cycling is needed to reduce uncertainty in the controlling processes behind the global land carbon sink.
Gross primary productivity (GPP) of wooded ecosystems (forests and savannas) is central to the global carbon cycle, comprising 67%–75% of total global terrestrial GPP. Climate change may alter this ...flux by increasing the frequency of temperatures beyond the thermal optimum of GPP (Topt). We examined the relationship between GPP and air temperature (Ta) in 17 wooded ecosystems dominated by a single plant functional type (broadleaf evergreen trees) occurring over a broad climatic gradient encompassing five ecoregions across Australia ranging from tropical in the north to Mediterranean and temperate in the south. We applied a novel boundary‐line analysis to eddy covariance flux observations to (a) derive ecosystem GPP–Ta relationships and Topt (including seasonal analyses for five tropical savannas); (b) quantitatively and qualitatively assess GPP–Ta relationships within and among ecoregions; (c) examine the relationship between Topt and mean daytime air temperature (MDTa) across all ecosystems; and (d) examine how down‐welling short‐wave radiation (Fsd) and vapour pressure deficit (VPD) influence the GPP–Ta relationship. GPP–Ta relationships were convex parabolas with narrow curves in tropical forests, tropical savannas (wet season), and temperate forests, and wider curves in temperate woodlands, Mediterranean woodlands, and tropical savannas (dry season). Ecosystem Topt ranged from 15℃ (temperate forest) to 32℃ (tropical savanna—wet and dry seasons). The shape of GPP–Ta curves was largely determined by daytime Ta range, MDTa, and maximum GPP with the upslope influenced by Fsd and the downslope influenced by VPD. Across all ecosystems, there was a strong positive linear relationship between Topt and MDTa (Adjusted R2: 0.81; Slope: 1.08) with Topt exceeding MDTa by >1℃ at all but two sites. We conclude that ecosystem GPP has adjusted to local MDTa within Australian broadleaf evergreen forests and that GPP is buffered against small Ta increases in the majority of these ecosystems.
Relationships between gross primary productivity (GPP) and air temperature (Ta) in wooded ecosystems are critical to understanding carbon cycles under changing climates. We examined GPP–Ta relationships of 17 Australian wooded ecosystems dominated by broadleaf evergreen trees occurring over a broad climatic gradient. GPP–Ta relationships were convex parabolas in all ecosystems. The thermal optimum of GPP (Topt) was linearly related with mean daytime Ta (MDTa), and Topt exceeded MDTa by >1℃ in most ecosystems. We conclude that GPP has adjusted to local MDTa and is buffered in many of these wooded ecosystems against small Ta increases.
The forest–atmosphere exchange of carbon and water is regulated by meteorological conditions as well as canopy properties such as leaf area index (LAI, m2 m−2), photosynthetic capacity (PC μmol m−2 ...s−1), or surface conductance in optimal conditions (Gs,opt, mmol m−2 s−1), which can vary seasonally and inter-annually. This variability is well understood for deciduous species but is poorly characterized in evergreen forests. Here, we quantify the seasonal dynamics of a temperate evergreen eucalypt forest with estimates of LAI, litterfall, carbon and water fluxes, and meteorological conditions from measurements and model simulations. We merged MODIS Enhanced Vegetation Index (EVI) values with site-based LAI measurements to establish a 17-year sequence of monthly LAI. We ran the Community Atmosphere Biosphere Land Exchange model (CABLE-POP (version r5046)) with constant and varying LAI for our site to quantify the influence of seasonal canopy dynamics on carbon and water fluxes. We observed that the peak of LAI occurred in late summer–early autumn, with a higher and earlier peak occurring in years when summer rainfall was greater. Seasonality in litterfall and allocation of net primary productivity (FNPP) to leaf growth (af, 0–1) drove this pattern, suggesting a complete renewal of the canopy before the timing of peak LAI. Litterfall peaked in spring, followed by a high af in summer, at the end of which LAI peaked, and PC and Gs,opt reached their maximum values in autumn, resulting from a combination of high LAI and efficient mature leaves. These canopy dynamics helped explain observations of maximum gross ecosystem production (FGEP) in spring and autumn and net ecosystem carbon loss in summer at our site. Inter-annual variability in LAI was positively correlated with Net Ecosystem Production (FNEP). It would be valuable to apply a similar approach to other temperate evergreen forests to identify broad patterns of seasonality in leaf growth and turnover. Because incorporating dynamic LAI was insufficient to fully capture the dynamics of FGEP, observations of seasonal variation in photosynthetic capacity, such as from solar-induced fluorescence, should be incorporated in land surface models to improve ecosystem flux estimates in evergreen forests.
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