High rates of Staphylococcus aureus are reported in prosthetic joint infection (PJI) in rheumatoid arthritis (RA). RA patients are considered to have a high risk of infection with bacteria of ...potentially oral or dental origin. One thousand four hundred forty-three revisions for infection were reported to the Norwegian Arthroplasty Register (NAR) from 1987 to 2007. For this study 269 infection episodes in 255 OA patients served as control group. In the NAR we identified 49 infection episodes in 37 RA patients from 1987 to 2009. The RA patients were, on average, 10 years younger than the OA patients and there were more females (70% versus 54%). We found no differences in the bacterial findings in RA and OA. A tendency towards a higher frequency of Staphylococcus aureus (18% versus 11%) causing PJI was found in the RA patients compared to OA. There were no bacteria of potential odontogenic origin found in the RA patients, while we found 4% in OA. The bacteria identified in revisions for infection in THRs in patients with RA did not significantly differ from those in OA. Bacteria of oral or dental origin were not found in infected hip joint replacements in RA.
In models with large extra dimensions, “miniature” black holes (BHs) might be produced in high-energy proton–proton collisions at the Large Hadron Collider (LHC). In the semi-classical regime, those ...BHs thermally decay, giving rise to large-multiplicity final states with jets and leptons. On the other hand, similar final states are also expected in the production of electroweak sphaleron/instanton-induced processes. We investigate whether one can discriminate these scenarios when BH or sphaleron-like events are observed in the LHC using machine learning (ML) methods. Classification among several BH scenarios with different numbers of extra dimensions and the minimal BH masses is also examined. In this study we consider three ML models: XGBoost algorithms with (1) high- and (2) low-level inputs, and (3) a Residual Convolutional Neural Network. In the latter case, the low-level detector information is converted into an input format of three-layer binned event images, where the value of each bin corresponds to the energy deposited in various detector subsystems. We demonstrate that only a small number of detected events are sufficient to effectively discriminate between the sphaleron and BH processes. Separation between BH scenarios with different minimal masses is possible with an order of 10 events passing the preselection. A sufficient number of events could be observed in combined Run-2 and -3 data, if the production cross section is not much smaller than the present limit
∼
0.1
fb. We find, however, that a large number of events is needed to discriminate between BH hypotheses with the same minimal BH mass, but different numbers of extra dimensions.
“Småblank” is the only population of Atlantic salmon in Europe living its entire life in the river habitat without performing migrations to the sea or lakes. Home range size and habitat use were ...compared between an unregulated tributary and hydro-power regulated parts of the main river during 2014–2017. In total, 140 småblank were tagged with radio transmitters and tracked for 4–5 months. Tagged fish tended to stay within small areas: the average 50% home range was 1123 m
2
and the average 95% home range was 4416 m
2
. Mean distance between the furthermost positions for individual fish during tracking was 242 m, and the fish did not migrate between different stretches of the river. The small home range and non-migrating behaviour may explain why småblank are divided into several genetically distinct populations with limited gene flow. The results showed that småblank were far more stationary than what is known for other landlocked salmon populations. Use of moderate or high water velocities’ (> 50 s
−1
) areas with coarse river substrates implies a vulnerability to anthropogenic effects such as water diversion, dams and weirs.
The vertical behaviour of 44 veteran sea trout Salmo trutta (275–580 mm) in different marine fjord habitats (estuary, pelagic, near shore with and without steep cliffs) was documented during ...May–February by acoustic telemetry. The swimming depth of S. trutta was influenced by habitat, time of day (day v. night), season, seawater temperature and the body length at the time of tagging. Mean swimming depth during May–September was 1·7 m (individual means ranged from 0·4 to 6·4 m). Hence, S. trutta were generally surface oriented, but performed dives down to 24 m. Mean swimming depth in May–September was deeper in the near‐shore habitats with or without steep cliffs (2·0 m and 2·5 m, respectively) than in the pelagic areas (1·2 m). May–September mean swimming depth in all habitats was slightly deeper during day (1·9 m) than at night (1·2 m), confirming that S. trutta conducted small‐scale diel vertical movements. During summer, S. trutta residing in near‐shore habitat progressively moved deeper over the period May (mean 1·1 m) to August (mean 4·0 m) and then reoccupied shallower areas (mean 2·3 m) during September. In winter (November and February), individuals residing in the innermost part of the fjords were found at similar average depths as they occupied during the summer (mean 1·3 m). The swimming depths of S. trutta coincide with the previously known surface orientation of salmon lice Lepeophtheirus salmonis. Combined with previous studies on horizontal use of S. trutta, this study illustrates how S. trutta utilize marine water bodies commonly influenced by anthropogenic factors such as aquaculture, harbours and marine constructions, marine renewable energy production or other human activity. This suggests that the marine behaviour of S. trutta and its susceptibility to coastal anthropogenic factors should be considered in marine planning processes.
The early migration and habitat use of brown trout Salmo trutta post‐smolts tagged with acoustic transmitters (n = 50) were investigated in a fjord system in central Norway from 30 April to 26 ...November 2014. The main aims were to investigate return rate, marine residence time and spatial use of the fjord system. Median seaward migration and return to fresh water dates were 22 May and 4 July, respectively. Of the 40 seaward migrating smolts, 26 returned to fresh water, giving a minimum return rate to fresh water of 65%. Entrance to the fjord from the river occurred mainly at night (80% of the S. trutta), however, no such diurnal pattern was observed during the return migration. Mean marine residence time was 38 days, but with large individual variation (22–99 days). The innermost parts of the study area were more utilized than the outer part of the fjord system during the sea residency, and with more use of the near shore habitat than the open, pelagic areas. Many post‐smolts also utilized the outer part of the fjord system, however, and 94% of the post‐smolts were recorded at least 14 km from the home river mouth. Marine survival and distribution in the fjord were size dependent with the largest individuals utilizing outer fjord areas and having higher return rates to fresh water. As far as is known, this is the first published study on temporal and spatial behaviour in the marine environment of first‐time S. trutta migrants during the full course of their first trip to sea.
Abstract
Marine growth has strong implications for reproductive potential and ultimate fitness of sea trout. Hence, the effects of anthropogenic factors on marine growth are important when evaluating ...population responses and implementing management measures. Temporal changes in growth patterns of sea trout from three Norwegian and two Irish watercourses were examined, covering time spans of 25–65 years. Elemental chemistry Ba:Ca profiles and visual reading of fish scales were used to estimate smolt length and lifetime growth after first sea entry. Reduced growth after the first sea entry coincided with periods of nearby (<14 km) salmon-farming activity in impacted watersheds in both countries. Increased Ba:Ca levels were also recorded during these periods, likely indicating reduced residency in marine habitats caused by premature return to freshwater and estuaries. An increase in estimated length at first sea entry coinciding with salmon-farming activity, for groups of fish sampled after sea migration, suggests a size-selective marine mortality, with the smallest individuals experiencing a larger mortality.
: Due to the solely subjective histopathological assessment, the WHO 2016 classification of human meningiomas is subject to interobserver variation. Consequently, the need for more reliable and ...objective markers are highly needed. The aim of this pilot study was to apply genome-wide DNA methylation analysis on a series of atypical meningiomas to evaluate the practical utility of this approach, examine whether prognostic subclasses are achieved and investigate whether there is an association between the methylation subclasses with poor prognosis and time to recurrence.
mutation analyses were also performed to explore the prognostic value of such mutations in these atypical meningiomas.
: Twenty intracranial WHO grade II atypical meningiomas from adult patients were included. They consisted of 10 cases with recurrence (group I), and 10 cases without recurrence (
). The formalin-fixed and paraffin-embedded tissues underwent standardized genome-wide DNA methylation analysis, and the profiles were matched with the reference library and tumor classifier from Heidelberg.
somatic mutation analyses were performed using the CNSv1panel from Düsseldorf.
: Eighteen out of 20 cases matched to the meningioma class using the common brain tumor classifier (v11b4). Four of these cases matched to a methylation subclass related to a prognostic subgroup based on a cut-off of 0.9.
mutations were detected in 55% of cases across both groups, and the most prominent copy number alterations were chromosomal losses of 22q, 1p and 14q. No significant
mutations were identified.
: Genome-wide DNA methylation profiling represents a useful tool in the diagnostics of meningiomas, however, methodological adjustments need to be addressed.
Reported prevalence, penetrance and expression of deleterious mutations in the mismatch repair (MMR) genes, MLH1, MSH2, MSH6 and PMS2, may reflect differences in the clinical criteria used to select ...families for DNA testing. The authors have previously reported that clinical criteria are not sensitive enough to identify MMR mutation carriers among incident colorectal cancer cases.
To describe the sensitivity of the criteria when applied to families with a demonstrated MMR mutation.
Families with an aggregation of colorectal cancers were examined for deleterious MMR mutations according to the Mallorca guidelines. All families with a detected MMR mutation as of November 2009 were reclassified according to the Amsterdam and Bethesda criteria.
Sixty-nine different DNA variants were identified in a total of 129 families. The original Amsterdam clinical criteria were met by 38%, 12%, 78% and 25% of families with mutations in MSH2, MSH6, MLH1 and PMS2, respectively. Corresponding numbers for the revised Amsterdam criteria were 62%, 48%, 87% and 38%. Similarly, each of the four clinical Bethesda criteria had low sensitivity for identifying MSH6 or PMS2 mutations.
Amsterdam criteria and each of the Bethesda criteria were inadequate for identifying MSH6 mutation-carrying kindreds. MSH6 mutations may be more common than currently assumed, and the penetrance/expression of MSH6 mutations, as derived from families meeting current clinical criteria, may be misleading. To increase detection rate of MMR mutation carriers, all cancers in the Lynch syndrome tumour spectrum should be subjected to immunohistochemical analysis and/or analysis for microsatellite instability.
Airguns used for offshore seismic exploration by the oil and gas industry contribute to globally increasing anthropogenic noise levels in the marine environment. There is concern that the ...omnidirectional, high intensity sound pulses created by airguns may alter fish physiology and behaviour. A controlled short-term field experiment was performed to investigate the effects of sound exposure from a seismic airgun on the physiology and behaviour of two socioeconomically and ecologically important marine fishes: the Atlantic cod (
) and saithe (
). Biologgers recording heart rate and body temperature and acoustic transmitters recording locomotory activity (i.e. acceleration) and depth were used to monitor free-swimming individuals during experimental sound exposures (18-60 dB above ambient). Fish were held in a large sea cage (50 m diameter; 25 m depth) and exposed to sound exposure trials over a 3-day period. Concurrently, the behaviour of untagged cod and saithe was monitored using video recording. The cod exhibited reduced heart rate (bradycardia) in response to the particle motion component of the sound from the airgun, indicative of an initial flight response. No behavioural startle response to the airgun was observed; both cod and saithe changed both swimming depth and horizontal position more frequently during sound production. The saithe became more dispersed in response to the elevated sound levels. The fish seemed to habituate both physiologically and behaviourally with repeated exposure. In conclusion, the sound exposures induced over the time frames used in this study appear unlikely to be associated with long-term alterations in physiology or behaviour. However, additional research is needed to fully understand the ecological consequences of airgun use in marine ecosystems.
Objective: Concerns over adverse effects of mercury released from dental amalgam sometimes lead patients to request removal of their amalgam restorations. Several studies report improvement of ...subjective health after removal of amalgam restorations, but the mechanisms are unclear. The aim of this paper is to present data on long term changes in intensity of health complaints after amalgam removal in a group of patients with health complaints self-attributed to dental amalgam. Data from the five years follow-up in a clinical trial are presented and related to potential determinants of change.
Materials and methods: Patients previously referred to a specialty unit for health complaints attributed to amalgam restorations were included in the study. The 20 participants who were allocated to the treatment group had all amalgam restorations removed and replaced with other dental restorative materials. Intensity of health complaints was calculated from questionnaire data and personality variables were measured by MMPI-2.
Results: At the follow-up five years after the amalgam removal was completed, intensity of general health complaints was significantly reduced (p=.001), but the symptom load was still high. The reduction was significantly correlated with concentration of mercury in urine at pre-treatment. There were no significant correlations with personality variables.
Conclusions: Removal of amalgam restorations was followed by a long term reduction of general health complaints, which was associated with mercury concentration in urine before amalgam removal. Additional studies are needed to confirm the potential mechanisms for the observed reduction.
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