The term ‘carbon sequestration' is commonly used to describe any increase in soil organic carbon (SOC) content caused by a change in land management, with the implication that increased soil carbon ...(C) storage mitigates climate change. However, this is only true if the management practice causes an additional net transfer of C from the atmosphere to land. Limitations of C sequestration for climate change mitigation include the following constraints: (i) the quantity of C stored in soil is finite, (ii) the process is reversible and (iii) even if SOC is increased there may be changes in the fluxes of other greenhouse gases, especially nitrous oxide (N₂O) and methane. Removing land from annual cropping and converting to forest, grassland or perennial crops will remove C from atmospheric CO₂ and genuinely contribute to climate change mitigation. However, indirect effects such as conversion of land elsewhere under native vegetation to agriculture could negate the benefit through increased CO₂ emission. Re-vegetating degraded land, of limited value for food production, avoids this problem. Adding organic materials such as crop residues or animal manure to soil, whilst increasing SOC, generally does not constitute an additional transfer of C from the atmosphere to land, depending on the alternative fate of the residue. Increases in SOC from reduced tillage now appear to be much smaller than previously claimed, at least in temperate regions, and in some situations increased N₂O emission may negate any increase in stored C. The climate change benefit of increased SOC from enhanced crop growth (for example from the use of fertilizers) must be balanced against greenhouse gas emissions associated with manufacture and use of fertilizer. An over-emphasis on the benefits of soil C sequestration may detract from other measures that are at least as effective in combating climate change, including slowing deforestation and increasing efficiency of N use in order to decrease N₂O emissions.
► We review soil issues relevant to global food security and ecosystem functioning. ► We suggest actions for each issue including policies, communication or research. ► Organic matter content is ...essential for improving many soil physical properties. ► Policies to make fertilizers affordable in developing countries are essential. ► Practices to cut greenhouse gas emissions from intensified agriculture are needed.
Requirements for research, practices and policies affecting soil management in relation to global food security are reviewed. Managing soil organic carbon (C) is central because soil organic matter influences numerous soil properties relevant to ecosystem functioning and crop growth. Even small changes in total C content can have disproportionately large impacts on key soil physical properties. Practices to encourage maintenance of soil C are important for ensuring sustainability of all soil functions. Soil is a major store of C within the biosphere – increases or decreases in this large stock can either mitigate or worsen climate change. Deforestation, conversion of grasslands to arable cropping and drainage of wetlands all cause emission of C; policies and international action to minimise these changes are urgently required. Sequestration of C in soil can contribute to climate change mitigation but the real impact of different options is often misunderstood. Some changes in management that are beneficial for soil C, increase emissions of nitrous oxide (a powerful greenhouse gas) thus cancelling the benefit. Research on soil physical processes and their interactions with roots can lead to improved and novel practices to improve crop access to water and nutrients. Increased understanding of root function has implications for selection and breeding of crops to maximise capture of water and nutrients. Roots are also a means of delivering natural plant-produced chemicals into soil with potentially beneficial impacts. These include biocontrol of soil-borne pests and diseases and inhibition of the nitrification process in soil (conversion of ammonium to nitrate) with possible benefits for improved nitrogen use efficiency and decreased nitrous oxide emission. The application of molecular methods to studies of soil organisms, and their interactions with roots, is providing new understanding of soil ecology and the basis for novel practical applications. Policy makers and those concerned with development of management approaches need to keep a watching brief on emerging possibilities from this fast-moving area of science. Nutrient management is a key challenge for global food production: there is an urgent need to increase nutrient availability to crops grown by smallholder farmers in developing countries. Many changes in practices including inter-cropping, inclusion of nitrogen-fixing crops, agroforestry and improved recycling have been clearly demonstrated to be beneficial: facilitating policies and practical strategies are needed to make these widely available, taking account of local economic and social conditions. In the longer term fertilizers will be essential for food security: policies and actions are needed to make these available and affordable to small farmers. In developed regions, and those developing rapidly such as China, strategies and policies to manage more precisely the necessarily large flows of nutrients in ways that minimise environmental damage are essential. A specific issue is to minimise emissions of nitrous oxide whilst ensuring sufficient nitrogen is available for adequate food production. Application of known strategies (through either regulation or education), technological developments, and continued research to improve understanding of basic processes will all play a part. Decreasing soil erosion is essential, both to maintain the soil resource and to minimise downstream damage such as sedimentation of rivers with adverse impacts on fisheries. Practical strategies are well known but often have financial implications for farmers. Examples of systems for paying one group of land users for ecosystem services affecting others exist in several parts of the world and serve as a model.
Glyphosate, the most widely used herbicide, is linked with environmental harm and there is a drive to replace it in agricultural systems. We model the impacts of discontinuing glyphosate use and ...replacing it with cultural control methods. We simulate winter wheat arable systems reliant on glyphosate and typical in northwest Europe. Removing glyphosate was projected to increase weed abundance, herbicide risk to the environment, and arable plant diversity and decrease food production. Weed communities with evolved resistance to non-glyphosate herbicides were not projected to be disproportionately affected by removing glyphosate, despite the lack of alternative herbicidal control options. Crop rotations with more spring cereals or grass leys for weed control increased arable plant diversity. Stale seedbed techniques such as delayed drilling and choosing ploughing instead of minimum tillage had varying effects on weed abundance, food production, and profitability. Ploughing was the most effective alternative to glyphosate for long-term weed control while maintaining production and profit. Our findings emphasize the need for careful consideration of trade-offs arising in scenarios where glyphosate is removed. Integrated Weed Management (IWM) with more use of cultural control methods offers the potential to reduce chemical use but is sensitive to seasonal variability and can incur negative environmental and economic impacts.
National governments are becoming increasingly aware of the importance of their soil resources and are shaping strategies accordingly. Implicit in any such strategy is that degradation threats and ...their potential effect on important soil properties and functions are defined and understood. In this paper, we aimed to review the principal degradation threats on important soil properties in the UK, seeking quantitative data where possible. Soil erosion results in the removal of important topsoil and, with it, nutrients, C and porosity. A decline in soil organic matter principally affects soil biological and microbiological properties, but also impacts on soil physical properties because of the link with soil structure. Soil contamination affects soil chemical properties, affecting nutrient availability and degrading microbial properties, whilst soil compaction degrades the soil pore network. Soil sealing removes the link between the soil and most of the ‘spheres’, significantly affecting hydrological and microbial functions, and soils on re‐developed brownfield sites are typically degraded in most soil properties. Having synthesized the literature on the impact on soil properties, we discuss potential subsequent impacts on the important soil functions, including food and fibre production, storage of water and C, support for biodiversity, and protection of cultural and archaeological heritage. Looking forward, we suggest a twin approach of field‐based monitoring supported by controlled laboratory experimentation to improve our mechanistic understanding of soils. This would enable us to better predict future impacts of degradation processes, including climate change, on soil properties and functions so that we may manage soil resources sustainably.
A medical grade nitrous oxide (N2O) and gaseous oxygen (GOX) “Nytrox” blend is investigated as a volumetrically-efficient replacement for GOX in SmallSat-scale hybrid propulsion systems. Combined ...with 3-D printed acrylonitrile butadiene styrene (ABS), the propellants represent a significantly safer, but superior performing, alternative to environmentally-unsustainable spacecraft propellants like hydrazine. In a manner analogous to the creation of soda-water using dissolved carbon dioxide, Nytrox is created by bubbling GOX under pressure into N2O until the solution reaches saturation. Oxygen in the ullage dilutes N2O vapor and increases the required decomposition energy barrier by several orders of magnitude. Thus, risks associated with inadvertent thermal or catalytic N2O decomposition are virtually eliminated. Preliminary results of a test-and-evaluation campaign are reported. A small spacecraft thruster is first tested using gaseous oxygen and 3-D printed ABS as the baseline propellants. Tests were then repeated using Nytrox as a “drop-in” replacement for GOX. Parameters compared include ignition reliability, latency, initiation energy, thrust coefficient, characteristic velocity, specific impulse, combustion efficiency, and fuel regression rate. Tests demonstrate Nytrox as an effective replacement for GOX, exhibiting a slightly reduced specific impulse, but with significantly higher volumetric efficiency. Vacuum specific impulse exceeding 300 s is reported. Future research topics are recommended.
Extensive work has been accomplished to characterize the intestinal bacterial community, known as the microbiota, and its association with host health and disease. However, very little is known about ...the spatiotemporal development and the origin of a minor intestinal fungal community, known as the mycobiota, in humans and animals, particularly in avian species.
In this study, we comprehensively characterized the biogeography and succession of the gastrointestinal (GI) mycobiota of broiler chickens and further revealed the fungal sources that are responsible for initial and long-term establishment of the mycobiota in the GI tract. Using Illumina sequencing of the internal transcribed spacer 2 (ITS2) region of fungal rRNA genes, we detected significant spatial and temporal differences in the mycobiota along the GI tract. In contrary to the microbiota, the mycobiota was more diverse in the upper than the lower GI tract with no apparent trend of succession up to 42 days of age. The intestinal mycobiota was dominated by the phyla Ascomycota and Basidiomycota with Gibberella, Aspergillus, and Candida being the most abundant genera. Although the chicken mycobiota was highly dynamic, Fusarium pseudonygamai was dominant throughout the GI tract regardless of age in this study. The core chicken mycobiome consisted of 26 fungal taxa accounting for greater than 85% of the fungal population in each GI location. However, we observed high variations of the intestinal mycobiota among different studies. We also showed that the total fungal population varied greatly from 1.0 × 10
to 1.1 × 10
/g digesta along the GI tract and only accounted for less than 0.06% of the bacteria in day-42 broilers. Finally, we revealed that the mycobiota from the hatchery environment was responsible for initial colonization in the GI tract of newly hatched chickens, but was quickly replaced by the fungi in the diet within 3 days.
Relative to the intestinal microbiota that consists of trillions of bacteria in hundreds of different species and becomes relatively stabilized as animals age, the chicken intestinal mycobiota is a minor microbial community that is temporally dynamic with limited diversity and no obvious pattern of successive changes. However, similar to the microbiota, the chicken mycobiota is spatially different along the GI tract, although it is more diverse in the upper than the lower GI tract. Dietary fungi are the major source of the intestinal mycobiota in growing chickens. Video abstract.
Summary
Soil organic carbon (SOC) and nitrogen (N) contents are controlled partly by plant inputs that can be manipulated in agricultural systems. Although SOC and N pools occur mainly in the topsoil ...(upper 0.30 m), there are often substantial pools in the subsoil that are commonly assumed to be stable. We tested the hypothesis that contrasting long‐term management systems change the dynamics of SOC and N in the topsoil and subsoil (to 0.75 m) under temperate conditions. We used an established field experiment in the UK where control grassland was changed to arable (59 years before) and bare fallow (49 years before) systems. Losses of SOC and N were 65 and 61% under arable and 78 and 74% under fallow, respectively, in the upper 0.15 m when compared with the grass land soil, whereas at 0.3–0.6‐m depth losses under arable and fallow were 41 and 22% and 52 and 35%, respectively. The stable isotopes 13C and 15N showed the effects of different treatments. Concentrations of long‐chain n‐alkanes C27, C29 and C31 were greater in soil under grass than under arable and fallow. The dynamics of SOC and N changed in both topsoil and subsoil on a decadal time‐scale because of changes in the balance between inputs and turnover in perennial and annual systems. Isotopic and geochemical analyses suggested that fresh inputs and decomposition processes occur in the subsoil. There is a need to monitor and predict long‐term changes in soil properties in the whole soil profile if soil is to be managed sustainably.
Highlights
Land‐use change affects soil organic carbon and nitrogen, but usually the topsoil only is considered.
Grassland cultivated to arable and fallow lost 13–78% SOC and N to 0.6 m depth within decades.
Isotopic and biomarker analyses suggested changes in delivery and turnover of plant‐derived inputs.
The full soil profile must be considered to assess soil quality and sustainability.
Host defense peptides (HDPs) are an integral part of the innate immune system acting as the first line of defense. Modulation of HDP synthesis has emerged as a promising host-directed approach to ...fight against infections. Inhibition of histone deacetylation or DNA methylation is known to enhance HDP gene expression. In this study, we explored a possible synergy in HDP gene induction between histone deacetylase inhibitors (HDACi) and DNA/histone methyltransferase inhibitors (DNMTi/HMTi). Two chicken macrophage cell lines were treated with structurally distinct HDACi, HMTi, or DNMTi individually or in combinations, followed by HDP gene expression analysis. Each epigenetic compound was found to be capable of inducing HDP expression. To our surprise, a combination of HDACi and HMTi or HDACi and DNMTi showed a strong synergy to induce the expressions of most HDP genes. The HDP-inducing synergy between butyrate, an HDACi, and BIX01294, an HMTi, were further verified in chicken peripheral blood mononuclear cells. Furthermore, tight junction proteins such as claudin 1 were also synergistically induced by HDACi and HMTi. Overall, we conclude that HDP genes are regulated by epigenetic modifications. Strategies to increase histone acetylation while reducing DNA or histone methylation exert a synergistic effect on HDP induction and, therefore, have potential for the control and prevention of infectious diseases.
Means to enhance storage of carbon in soil or avoid its loss from soil are discussed and examined from the viewpoint of policy. In particular, technologies that have until now received little ...attention are assessed. The main means by which soil carbon might be increased are first listed. These are the following: (i) increasing the rate of input of organic matter; (ii) decreasing the rate of its decomposition by biological or chemical means; (iii) increasing the rate of its stabilization by physico‐chemical protection within aggregates and organo‐mineral complexes; and (iv) increasing the depth or more correctly the total soil volume sequestering carbon at maximum rate. Immediate gains in carbon storage might be made by switching to more perennial crops, especially grasses that, as a result of breeding, are able to put more carbon into soil. In the longer term, targets for research such as understanding the role of enzymes in carbon turnover and the exploitation of the capacity in subsoils are suggested. Increased fixation of CO₂ as inorganic carbonate in soils by application of silicate wastes may have some role.
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