Between the land and ocean, diverse coastal ecosystems transform, store, and transport material. Across these interfaces, the dynamic exchange of energy and matter is driven by hydrological and ...hydrodynamic processes such as river and groundwater discharge, tides, waves, and storms. These dynamics regulate ecosystem functions and Earth's climate, yet global models lack representation of coastal processes and related feedbacks, impeding their predictions of coastal and global responses to change. Here, we assess existing coastal monitoring networks and regional models, existing challenges in these efforts, and recommend a path towards development of global models that more robustly reflect the coastal interface.
Coastal wetlands are among the most productive habitats on Earth and sequester globally significant amounts of atmospheric carbon (C). Extreme rates of soil C accumulation are widely assumed to ...reflect efficient C storage. Yet the fraction of wetland C lost via hydrologic export has not been directly quantified, since comprehensive budgets including direct estimates of lateral C loss are lacking. We present a complete net ecosystem C budget (NECB), demonstrating that lateral losses of C are a major component of the NECB for the largest stable brackish tidal marsh on the U.S. Pacific coast. Mean annual net ecosystem exchange of CO2 with the atmosphere (NEE = −185 g C m2 year−1, negative NEE denoting ecosystem uptake) was compared to long‐term soil C burial (87–110 g C m2 year−1), suggesting only 47–59% of fixed atmospheric C accumulates in soils. Consistently, direct monitoring in 2017–2018 showed NEE of −255 g C m−2 year−1, and hydrologic export of 105 g C m−2 year−1 (59% of NEE remaining on site). Despite their high C sequestration capacity, lateral losses from coastal wetlands are typically a larger fraction of the NECB when compared to other terrestrial ecosystems. Loss of inorganic C (the least measured NECB term) was 91% of hydrologic export and may be the most important term limiting C sequestration. The high productivity of coastal wetlands thus serves a dual function of C burial and estuarine export, and the multiple fates of fixed C must be considered when evaluating wetland capacity for C sequestration.
Key Points
We present a complete carbon budget for the largest brackish tidal marsh in the Pacific United States
Direct and indirect measurement showed 47% to 59% of fixed carbon is stored on site and most loss is through inorganic carbon export
A compilation of global data sets showed lateral loss larger term in coastal wetland carbon budgets, relative to other terrestrial systems
Quantifying carbon fluxes into and out of coastal soils is critical to meeting greenhouse gas reduction and coastal resiliency goals. Numerous ‘blue carbon’ studies have generated, or benefitted ...from, synthetic datasets. However, the community those efforts inspired does not have a centralized, standardized database of disaggregated data used to estimate carbon stocks and fluxes. In this paper, we describe a data structure designed to standardize data reporting, maximize reuse, and maintain a chain of credit from synthesis to original source. We introduce version 1.0.0. of the Coastal Carbon Library, a global database of 6723 soil profiles representing blue carbon‐storing systems including marshes, mangroves, tidal freshwater forests, and seagrasses. We also present the Coastal Carbon Atlas, an R‐shiny application that can be used to visualize, query, and download portions of the Coastal Carbon Library. The majority (4815) of entries in the database can be used for carbon stock assessments without the need for interpolating missing soil variables, 533 are available for estimating carbon burial rate, and 326 are useful for fitting dynamic soil formation models. Organic matter density significantly varied by habitat with tidal freshwater forests having the highest density, and seagrasses having the lowest. Future work could involve expansion of the synthesis to include more deep stock assessments, increasing the representation of data outside of the U.S., and increasing the amount of data available for mangroves and seagrasses, especially carbon burial rate data. We present proposed best practices for blue carbon data including an emphasis on disaggregation, data publication, dataset documentation, and use of standardized vocabulary and templates whenever appropriate. To conclude, the Coastal Carbon Library and Atlas serve as a general example of a grassroots F.A.I.R. (Findable, Accessible, Interoperable, and Reusable) data effort demonstrating how data producers can coordinate to develop tools relevant to policy and decision‐making.
To improve understanding of coastal soil ‘blue carbon’, we describe a data structure designed to standardize data reporting and introduce version 1.0.0. of the Coastal Carbon Library, as well as the Coastal Carbon Atlas, an application that can be used to query, and download it. The 6723 soil profiles originate from 64 countries, represent marsh, mangrove, and seagrass ecosystems, and can be used for carbon stock assessments, estimating carbon burial rate, and fitting dynamic soil formation models. This F.A.I.R. data effort demonstrates how data producers can coordinate to develop tools relevant to policy and decision‐making.
Wetlands are the largest natural source of methane (CH4) to the atmosphere. The eddy covariance method provides robust measurements of net ecosystem exchange of CH4, but interpreting its ...spatiotemporal variations is challenging due to the co‐occurrence of CH4 production, oxidation, and transport dynamics. Here, we estimate these three processes using a data‐model fusion approach across 25 wetlands in temperate, boreal, and Arctic regions. Our data‐constrained model—iPEACE—reasonably reproduced CH4 emissions at 19 of the 25 sites with normalized root mean square error of 0.59, correlation coefficient of 0.82, and normalized standard deviation of 0.87. Among the three processes, CH4 production appeared to be the most important process, followed by oxidation in explaining inter‐site variations in CH4 emissions. Based on a sensitivity analysis, CH4 emissions were generally more sensitive to decreased water table than to increased gross primary productivity or soil temperature. For periods with leaf area index (LAI) of ≥20% of its annual peak, plant‐mediated transport appeared to be the major pathway for CH4 transport. Contributions from ebullition and diffusion were relatively high during low LAI (<20%) periods. The lag time between CH4 production and CH4 emissions tended to be short in fen sites (3 ± 2 days) and long in bog sites (13 ± 10 days). Based on a principal component analysis, we found that parameters for CH4 production, plant‐mediated transport, and diffusion through water explained 77% of the variance in the parameters across the 19 sites, highlighting the importance of these parameters for predicting wetland CH4 emissions across biomes. These processes and associated parameters for CH4 emissions among and within the wetlands provide useful insights for interpreting observed net CH4 fluxes, estimating sensitivities to biophysical variables, and modeling global CH4 fluxes.
The model‐data fusion using measured CH4 emissions from 25 wetlands indicated that (1) CH4 production appeared to be the most important process in explaining inter‐site variations in CH4 emissions, (2) plant‐mediated transport appeared to be the major pathway for CH4 transport, and (3) the importance of parameters, related CH4 production, plant‐mediated transport, and diffusion through water, for predicting wetland CH4 emissions across biomes.
The fate of permafrost carbon upon thaw will drive feedbacks to climate warming. Here we consider the character and context of dissolved organic carbon (DOC) in yedoma permafrost cores from up to 20 ...m depth in central Alaska. We observed high DOC concentrations (4 to 129 mM) and consistent low molecular weight organic acid concentrations in three cores. We estimate a DOC production rate of 12 µmol DOC m−2 yr−1 based on model ages of up to ~200 kyr derived from uranium isotopes. Acetate C accounted for 24 ± 1% of DOC in all samples. This proportion suggests long‐term anaerobiosis and is likely to influence thaw outcomes due to biolability of acetate upon release in many environments. The combination of uranium isotopes, ammonium concentrations, and calcium concentrations explained 86% of the variation in thaw water DOC concentrations, suggesting that DOC production may be related to both reducing conditions and mineral dissolution over time.
Key Points
Aged, biolabile forms of DOC are present in Pleistocene permafrost
Reducing conditions in yedoma produce biolabile DOC and characteristic solutes over time
Both reducing conditions and mineral dissolution are related to permafrost DOC production
Rice cultivation practices from field preparation to post-harvest transform rice paddies into hot spots for microbial mercury methylation, converting less-toxic inorganic mercury to more-toxic ...methylmercury, which is likely translocated to rice grain. This review includes 51 studies reporting rice total mercury and/or methylmercury concentrations, based on rice (Orzya sativa) cultivated or purchased in 15 countries. Not surprisingly, both rice total mercury and methylmercury levels were significantly higher in polluted sites compared to non-polluted sites (Wilcoxon rank sum, p<0.001). However, rice percent methylmercury (of total mercury) did not differ statistically between polluted and non-polluted sites (Wilcoxon rank sum, p=0.35), suggesting comparable mercury methylation rates in paddy soil across these sites and/or similar accumulation of mercury species for these rice cultivars. Studies characterizing the effects of rice cultivation under more aerobic conditions were reviewed to determine the mitigation potential of this practice. Rice management practices utilizing alternating wetting and drying (instead of continuous flooding) caused soil methylmercury levels to spike, resulting in a strong methylmercury pulse after fields were dried and reflooded; however, it is uncertain whether this led to increased translocation of methylmercury from paddy soil to rice grain. Due to the potential health risks, it is advisable to investigate this issue further, and to develop separate water management strategies for mercury polluted and non-polluted sites, in order to minimize methylmercury exposure through rice ingestion.
•Found 51 studies from 15 countries concerning rice and mercury/methylmercury.•Highest rice mercury/methylmercury in China, India, and Indonesia.•Flooding and intermittent flooding in rice paddies promoted mercury methylation.•Mitigation should be tailored for mercury polluted and non-polluted sites.
Wetland environments provide numerous ecosystem services but also facilitate methylmercury (MeHg) production and bioaccumulation. We developed a wetland‐management technique to reduce MeHg ...concentrations in wetland fish and water. We physically modified seasonal wetlands by constructing open‐ and deep‐water treatment cells at the downstream end of seasonal wetlands to promote naturally occurring MeHg‐removal processes. We assessed the effectiveness of reducing mercury (Hg) concentrations in surface water and western mosquitofish that were caged at specific locations within 4 control and 4 treatment wetlands. Methylmercury concentrations in wetland water were successfully decreased within treatment cells during only the third year of study; however, treatment cells were not effective for reducing total Hg concentrations. Furthermore, treatment cells were not effective for reducing total Hg concentrations in wetland fish. Mercury concentrations in fish were not correlated with total Hg concentrations in filtered, particulate, or whole water; and the slope of the correlation with water MeHg concentrations differed between months. Fish total Hg concentrations were weakly correlated with water MeHg concentrations in April when fish were introduced into cages but were not correlated in May when fish were retrieved from cages. Fish total Hg concentrations were greater in treatment wetlands than in control wetlands the year after the treatment wetlands’ construction but declined by the second year. During the third year, fish total Hg concentrations increased in both control and treatment wetlands after an unexpected regional flooding event. Overall, we found limited support for the use of open‐ and deep‐water treatment cells at the downstream end of wetlands to reduce MeHg concentrations in water but not fish. We suggest that additional evaluation over a longer period of time is necessary. Environ Toxicol Chem 2019;38:2178–2196. Published 2019 Wiley Periodicals, Inc. on behalf of SETAC. This article is a US government work, and as such, is in the public domain in the United States of America..
We developed a wetland‐management technique to reduce methylmercury concentrations in wetland fish and water. We physically modified seasonal wetlands by constructing open‐ and deep‐water treatment cells at the downstream end of seasonal wetlands to promote naturally occurring methylmercury‐removal processes.
Tidal wetlands play an important role in global carbon cycling by storing carbon in sediment at millennial time scales, transporting dissolved carbon into coastal waters, and contributing ...significantly to global CH4 budgets. However, these ecosystems' greenhouse gas monitoring and predictions are challenging due to spatial heterogeneity and tidal flooding. We utilized eddy covariance and chamber measurements to quantify fluxes of CO2 and CH4 at a restored tidal saltmarsh across spatial and temporal scales. Eddy covariance data revealed that the site was a strong net sink for CO2 (−387 g C‐CO2 m−2 yr−1, SD = 46) and a small net source of CH4 (0.7 g C‐CH4 m−2 yr−1, SD = 0.4). After partitioning net ecosystem exchange of CO2 into gross primary production and ecosystem respiration, we found that high net uptake of CO2 was due to low respiration emissions rather than high photosynthetic rates. We also found that respiration rates varied between land covers with increased respiration in mudflats compared to vegetated areas. Daytime soil chamber measurements revealed that the greatest CO2 emission was from higher elevation mudflat soils (0.5 μmol m−2s−1, SE = 1.3) and CH4 emission was greatest from lower elevation Spartina foliosa soils (1.6 nmol m−2s−1, SD = 8.2). Overall, these results highlight the importance of the relationships between wetland plant community and elevation, and inundation for CO2 and CH4 fluxes. Future research should include the use of high‐resolution imagery, automated chambers, and a focus on quantifying carbon exported in tidal waters.
Plain Language Summary
At the ecosystem level, a restored tidal salt marsh in the South San Francisco Bay California took in more carbon dioxide (CO2) from the atmosphere through photosynthetic activity than it emitted through respiration, and it emitted very small amounts of methane (CH4). This site appears to be a stronger sink for CO2 compared to other tidal marsh sites due to the very low rate of CO2 being lost through respiration to the atmosphere, rather than strong photosynthetic rates. We also found that ecosystem level CO2 emissions and the responses to temperature and light varied based on land cover type. By measuring soil surface emissions from each of the main land cover types of pickleweed, cordgrass, and mudflats we found that on average soils with lower elevation where cordgrass grows were stronger sources of CH4 while mudflat soils with greater elevation were stronger sources of CO2.
Key Points
Soil chamber measurements were able to detect significant differences in CO2 and CH4 fluxes between land cover types
Vegetation and microtopography are drivers of the spatially heterogeneous CO2 and CH4 emissions within the wetland
At the ecosystem level, high net uptake of CO2 was the result of low respiration emissions, suggesting lateral transport of dissolved CO2
The San Francisco Bay–Delta Estuary watershed is a major source of freshwater for California and a profoundly human-impacted environment. The water quality monitoring that is critical to the ...management of this important water resource and ecosystem relies primarily on a system of fixed water-quality monitoring stations, but the limited spatial coverage often hinders understanding. Here, we show how the latest technology in visible/near-infrared imaging spectroscopy can facilitate water quality monitoring in this highly dynamic and heterogeneous system by enabling simultaneous depictions of several water quality indicators at very high spatial resolution. The airborne portable remote imaging spectrometer (PRISM) was used to derive high-spatial-resolution (2.6 × 2.6 m) distributions of turbidity, and dissolved organic carbon (DOC) and chlorophyll-a concentrations in a wetland-influenced region of this estuary. A filter-passing methylmercury vs DOC relationship was also developed using in situ samples and enabled the high-spatial-resolution depiction of surface methylmercury concentrations in this area. The results illustrate how high-resolution imaging spectroscopy can inform management and policy development in important inland and estuarine water bodies by facilitating the detection of point- and nonpoint-source pollution, and by providing data to help assess the complex impacts of wetland restoration and climate change on water quality and ecosystem productivity.
We performed plant removal (devegetation) experiments across a suite of ecologically diverse wetland settings (tidal salt marshes, river floodplain, rotational rice fields, and freshwater wetlands ...with permanent or seasonal flooding) to determine the extent to which the presence (or absence) of actively growing plants influences the activity of the Hg(II)‐methylating microbial community and the availability of Hg(II) to those microbes. Vegetated control plots were paired with neighboring devegetated plots in which photosynthetic input was terminated 4–8 months prior to measurements, through clipping aboveground biomass, severing belowground connections, and shading the sediment surface to prevent regrowth. Across all wetlands, devegetation decreased the activity of the Hg(II)‐methylating microbial community (kmeth) by 38%, calculated MeHg production potential (MP) rates by 36%, and pore water acetate concentration by 78%. Decreases in MP were associated with decreases in microbial sulfate reduction in salt marsh settings. In freshwater agricultural wetlands, decreases in MP were related to indices of microbial iron reduction. Sediment MeHg concentrations were also significantly lower in devegetated than in vegetated plots in most wetland settings studied. Devegetation effects were correlated with live root density (percent volume) and were most profound in vegetated sites with higher initial pore water acetate concentrations. Densely rooted wetlands had the highest rates of microbial Hg(II)‐methylation activity but often the lowest concentrations of bioavailable reactive Hg(II). We conclude that the exudation of labile organic carbon (e.g., acetate) by plants leads to enhanced microbial sulfate and iron reduction activity in the rhizosphere, which results in high rates of microbial Hg(II)‐methyation and high MeHg concentrations in wetland sediment.
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