Since the collapse of the Soviet Union, the crop cultivation structure in the Aral Sea Basin has changed dramatically, and these changes are worth studying. However, historical crop remote sensing mapping at the watershed scale remains challenging, especially crop misclassification at the cropland edge due to mixed pixels. Therefore, we proposed a field segmentation approach to constrain field edges based on time‐series Sentinel‐2 remote sensing images and the Google Earth Engine platform and then employed the random forest algorithm to perform crop classification based on time series Landsat/Sentinel‐2 images and crop phenology information to produce historical crop maps in the Aral Sea Basin from the 1990s onward. The results showed that the intersection over union between the extracted field edges and in situ‐measured field size data was 0.65. The overall accuracy of crop mapping was 95.2% in 2019. Then, we extended our method to historical mapping over the 1991–2015 period with accuracies ranging from 82.8% to 91.3%. Moreover, our method applied to historical mapping works well in terms of accuracy and policy matching. These findings indicate that our method can accurately distinguish cropland edges to reduce classification errors due to mixed pixels. This method is promising for solving the cropland edge problem for historical crop mapping in the Aral Sea Basin and can potentially provide a reference for historical crop classification in other watersheds of the world.