We report on the time-resolved optical CCD photometry of newly discovered SU UMa-type dwarf novae, FL TrA and CTCVJ0549 $-$ 4921. During a 2006 August outburst, we detected superhumps with a period of 0.59897(11) days for FL TrA, clarifying the SU UMa nature of the system. On the first night of our observations of FL TrA, the object showed no superhumps. This implies that it takes a few days for the full development of superhumps. The superhump period variation diagram of FL TrA was similar to that observed in some WZ Sge stars and short-period SU UMa-type stars. This indicates that the system is closely related to WZ Sge stars and SU UMa stars having short orbital periods. For CTCV J0549 $-$ 4921, the candidates of the mean superhump period are 0.083249(10) days and 0.084257(8) days, respectively. Due to a lack of observations, we cannot determine the true superhump period, but the latter period is favorable. Using the ASAS-3 archive, it turned out that the system showed only four outbursts over the past 6 years. The outburst amplitude of CTCV J0549 $-$ 4921 was relatively small, with about 4.5 mag. One possibility is that mass evaporation may play a role during quiescence.