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Hirsch, Susanne; Blätte, Tamara J; Grasedieck, Sarah; Cocciardi, Sibylle; Rouhi, Arefeh; Jongen-Lavrencic, Mojca; Paschka, Peter; Krönke, Jan; Gaidzik, Verena I; Döhner, Hartmut; Schlenk, Richard F; Kuchenbauer, Florian; Döhner, Konstanze; Dolnik, Anna; Bullinger, Lars
Haematologica, 12/2017, Letnik: 102, Številka: 12Journal Article
In acute myeloid leukemia, there is growing evidence for splicing pattern deregulation, including differential expression of linear splice isoforms of the commonly mutated gene ( ). In this study, we detect circular RNAs of and quantify circRNA hsa_circ_0075001 in a cohort of wild-type and mutated acute myeloid leukemia (n=46). Hsa_circ_0075001 expression correlates positively with total expression, but is independent of the mutational status. High low hsa_circ_0075001 expression defines patient subgroups characterized by distinct gene expression patterns, such as lower expression of components of the Toll-like receptor signaling pathway in high hsa_circ_0075001 expression cases. Global evaluation of circRNA expression in sorted healthy hematopoietic controls (n=10) and acute myeloid leukemia (n=10) reveals circRNA transcripts for 47.9% of all highly expressed genes. While circRNA expression correlates globally with parental gene expression, we identify hematopoietic differentiation-associated as well as acute myeloid leukemia subgroup-specific circRNA signatures.
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