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Introducing mothur : open-source, platform-independent, community-supported software for describing and comparing microbial communitiesSchloss, Patrick D. ...Mothur aims to be a comprehensive software package that allows users to use a single piece of software to analyze community sequence data. It builds upon previous tools to provide a flexible and ... powerful software package for analyzing sequencing data. As a case study, we used mothur totrim, screen, and align sequences, calculate distances, assign sequences to OTUs, and describe that alfa-and ß-diversity of eight marine samples previously characterized by pyrpsequencing of 16S rRNA gene fragments. This analysis of more than 222,000 sequences was completed in less than 2 hours using laptop computer.Source: Applied and environmental microbiology. - ISSN 0099-2240 (No. 23, Vol. 75, 2009, str. 7537-7541)Type of material - article, component partPublish date - 2009Language - englishCOBISS.SI-ID - 2517640
Author
Schloss, Patrick D. |
Westcott, Sarah L. |
Ryabin, Thomas |
Hall, Justine R. |
Hartmann, Martin, mikrobiolog |
Hollister, Emily B. |
Lesniewski, Ryan A. |
Oakley, Brian B. |
Parks, Donovan H. |
Robinson, Courtney J. |
Sahl, Jason W. |
Stres, Blaž |
Thallinger, Gerhard G. |
Horn, David J. van |
Weber, Caroly F.
Topics
mikrobiologija |
mikrobne združbe |
bioinformatika |
mothur
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Database name | Field | Year |
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Links to authors' personal bibliographies | Links to information on researchers in the SICRIS system |
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Schloss, Patrick D. | |
Westcott, Sarah L. | |
Ryabin, Thomas | |
Hall, Justine R. | |
Hartmann, Martin, mikrobiolog | |
Hollister, Emily B. | |
Lesniewski, Ryan A. | |
Oakley, Brian B. | |
Parks, Donovan H. | |
Robinson, Courtney J. | |
Sahl, Jason W. | |
Stres, Blaž | 19104 |
Thallinger, Gerhard G. | |
Horn, David J. van | |
Weber, Caroly F. |
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