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  • Whole genome sequence analysis of bovine G6P[11] rotavirus strain found in a child with gastroenteritis
    Steyer, Andrej ...
    During the rotavirus strain surveillance in Slovenia, G6Pš11đ bovine rotavirusstrain was detected in a 5 months old boy with gastroenteritis. The strain was enrolled in a whole genome sequence ... analysis to determine its genome segment composition and genetic characteristics. Genotype composition for the whole genome was G6-Pš11đ-I2-R2-C2-M2-A13-N2-T6-E2-H3, reflecting similarities with bovine rotavirus strains. The bovine origin of the strain was confirmed in all genome segments, showing the highest nucleotide identity with bovine rotavirus strains and clustering of the RVA/Human-wt/SVN/SI-R56/07/2007/G6Pš11đ together with bovine rotavirus strainsin phylogenetic analysis. This is the first bovine G6Pš11đ rotavirus strain with the whole genome analysis and the first report on rotavirus G6Pš11đ genotype detected in humans.
    Source: Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases. - ISSN 1567-1348 (Vol. 13, 2013, str. 89-95)
    Type of material - article, component part ; adult, serious
    Publish date - 2013
    Language - english
    COBISS.SI-ID - 30182617

    Link(s):

    http://www.sciencedirect.com/science/article/pii/S1567134812002973
    DOI

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