Human activities are transforming grassland biomass via changing climate, elemental nutrients, and herbivory. Theory predicts that food-limited herbivores will consume any additional biomass ...stimulated by nutrient inputs ('consumer-controlled'). Alternatively, nutrient supply is predicted to increase biomass where herbivores alter community composition or are limited by factors other than food ('resource-controlled'). Using an experiment replicated in 58 grasslands spanning six continents, we show that nutrient addition and vertebrate herbivore exclusion each caused sustained increases in aboveground live biomass over a decade, but consumer control was weak. However, at sites with high vertebrate grazing intensity or domestic livestock, herbivores consumed the additional fertilization-induced biomass, supporting the consumer-controlled prediction. Herbivores most effectively reduced the additional live biomass at sites with low precipitation or high ambient soil nitrogen. Overall, these experimental results suggest that grassland biomass will outstrip wild herbivore control as human activities increase elemental nutrient supply, with widespread consequences for grazing and fire risk.
Regeneration of original dry forests and shrublands in degraded arid and semiarid ecosystems can be a slow and difficult process. It has been hypothesized that restoration efforts during periods of ...increased water availability may potentially trigger shifts back to a high vegetation cover depending on several environmental factors that govern the response of vegetation to rainfall. Tuning restoration efforts to climate variability will likely become increasingly important under climate change conditions. The experiences evaluated here are a pioneering effort to reforest arid South American forests. We used a combination of field monitoring and remote sensing images to evaluate the long‐term effects of seeding and herbivore control in local reforestation projects tuned to the forecasted rainy El Niño Southern Oscillation (ENSO) events of 1991/1992 and 1997/1998 in North Peru and to assess the regional response of vegetation to these rainy events at a regional scale. We found that managing seed availability in combination with seedling protection from herbivores only yielded persistent higher vegetation cover when implemented on sites without calcareous layers and relatively high water availability determined by the surrounding topography. Our study shows that management tuned to forecasted rainfall events is able to trigger a long‐lasting shift toward higher vegetation cover. We provide a better insight in how environmental factors shape vegetation response to increased rainfall and discuss the implications for ecosystem resilience and restoration.
Wild herbivore diversity and abundance have declined in African savannas for the past 20 years. Competition for forage resources between wild herbivore and livestock species might contribute to this ...decline, given habitat and diet overlap under conditions of resource limitation. Development of conservation and management strategies rely on understanding the spatial distribution of resources for livestock and wildlife, especially since the combination of transhumance pastoralism and wildlife conservation is common over Africa. We studied the distribution patterns of wild grazers in relation to cattle abundance, and distance to permanent and seasonal water bodies in semi-arid Kenya between 1983 and 2000. Cattle were abundant far from permanent water bodies during dry and wet years. Wild grazers less dependent on water also concentrated far from water during all years. Only wild grazer species more dependent on water remained concentrated close to water. Hence, wild grazers and cattle show spatial partitioning in the use of permanent and seasonal water bodies, but not in their forage resources. Our study provides no strong evidence of spatial displacement of wild grazers by cattle. We suggest that pastoralist decisions on cattle distribution do not need to negatively affect wildlife distribution and that coexistence can be possible through spatial partitioning. Our results show that pastoralist decisions play an important role in the interactions between livestock and wildlife in African savannas and that herd mobility is a key component in supporting sustainable use of resources for both wildlife and livestock.
Predation influences prey survival and drives evolution of anti-predator behaviour. Anti-predator strategies by prey are stimulated by direct encounters with predators, but also by exposure to ...indicators of risk such as moonlight illumination and vegetation cover. Many prey species will suffer increased risk on moonlit nights, but risk may be reduced by the presence of dense vegetation. Determining the role of vegetation in reducing perceived risk is important, especially given predictions of increased global wildfire, which consumes vegetation and increases predation. We used remote cameras in southeastern Australia to compare support for the predation risk and habitat-mediated predation risk hypotheses. We examined the influence of moonlight and understorey cover on seven 20-2500 g mammalian prey species and two introduced predators, red foxes and feral cats. Activity of all prey species reduced by 40-70% with increasing moonlight, while one species (bush rat) reduced activity in response to increasing moonlight more sharply in low compared to high understorey cover. Neither predator responded to moonlight. Our findings supported the predation risk hypothesis and provided limited support for the habitat-mediated predation risk hypothesis. For prey, perceived costs of increased predation risk on moonlit nights outweighed any benefits of a brighter foraging environment.
Non-homologous end joining (NHEJ) is the primary pathway for repairing DNA double-strand breaks (DSBs) in mammalian cells. Such breaks are formed, for example, during gene-segment rearrangements in ...the adaptive immune system or by cancer therapeutic agents. Although the core components of the NHEJ machinery are known, it has remained difficult to assess the specific roles of these components and the dynamics of bringing and holding the fragments of broken DNA together. The structurally similar XRCC4 and XLF proteins are proposed to assemble as highly dynamic filaments at (or near) DSBs. Here we show, using dual- and quadruple-trap optical tweezers combined with fluorescence microscopy, how human XRCC4, XLF and XRCC4-XLF complexes interact with DNA in real time. We find that XLF stimulates the binding of XRCC4 to DNA, forming heteromeric complexes that diffuse swiftly along the DNA. Moreover, we find that XRCC4-XLF complexes robustly bridge two independent DNA molecules and that these bridges are able to slide along the DNA. These observations suggest that XRCC4-XLF complexes form mobile sleeve-like structures around DNA that can reconnect the broken ends very rapidly and hold them together. Understanding the dynamics and regulation of this mechanism will lead to clarification of how NHEJ proteins are involved in generating chromosomal translocations.
The expression of SMAD4, the central component of the transforming growth factor-β (TGF-β) and bone morphogenetic protein (BMP) signalling pathways, is lost in 50% of pancreatic cancers and is ...associated with a poor survival. Although the TGF-β pathway has been extensively studied and characterised in pancreatic cancer, there is very limited data on BMP signalling, a well-known tumour-suppressor pathway. BMP signalling can be lost not only at the level of SMAD4 but also at the level of BMP receptors (BMPRs), as has been described in colorectal cancer.
We performed immunohistochemical analysis of the expression levels of BMP signalling components in pancreatic cancer and correlated these with survival. We also manipulated the activity of BMP signalling in vitro.
Reduced expression of BMPRIA is associated with a significantly worse survival, primarily in a subset of SMAD4-positive cancers. In vitro inactivation of SMAD4-dependent BMP signalling increases proliferation and invasion of pancreatic cancer cells, whereas inactivation of BMP signalling in SMAD4-negative cells does not change the proliferation and invasion or leads to an opposite effect.
Our data suggest that BMPRIA expression is a good prognostic marker and that the BMP pathway is a potential target for future therapeutic interventions in pancreatic cancer.
•Reptile species respond to site-scale and landscape-scale variables.•Habitat structure, time since fire, and landscape structure influence reptile abundance.•Influence of site-scale variables on ...reptile species may depend on landscape structure.•Understanding responses to variables at multiple spatial scales is important for reptile conservation.
Land use changes, such as the development of agriculture and plantation forestry, and altered fire regimes, are major drivers of biodiversity loss worldwide, influencing the availability of suitable habitat for species. Reptiles are sensitive to both these processes as they are influenced by native vegetation extent and habitat structure. While much is known about the independent effects of fire and land use change on species distributions, few studies have investigated potential interactive effects; specifically, whether the influence of site-scale variables on reptiles depends on the properties of the surrounding landscape. We sampled reptiles at 107 sites in fire-prone heathy woodland, interspersed with plantation forestry and agriculture in south-west Victoria, Australia. We investigated the responses of seven reptile species to both site-scale variables (time since fire and several measures of habitat structure) and landscape-scale variables (extent of native vegetation and plantations and the presence of pasture within a 3.14 square km area) to 1) identify whether species’ responses to fire and habitat depended on landscape structure, and 2) examine the relative influence of time since fire, habitat structure and landscape structure on reptile abundance. We predicted that responses to site-scale variables would vary with a key landscape structure variable: the amount of native vegetation cover. Further, we predicted that site-scale variables would be stronger predictors of species abundance than landscape-scale variables. Generalised linear models, accounting for imperfect detection, were used to estimate species responses to site and landscape-scale predictors. For two species (Amphibolurus muricatus and Liopholis whitii) there was evidence that their responses to site-scale variables depended on landscape structure. However, contrary to our first prediction, native vegetation cover was not the only landscape structure variable that influenced species’ responses to site-scale variables. Three species (Acritoscincus duperreyi, A. muricatus, and Lerista bougainvillii) responded to both habitat structure and landscape structure variables, though the relative influence of the variables at the different scales was varied among the species. One species (Lampropholis guichenoti) responded to fire and habitat structure variables at the site-scale but did not respond to landscape structure. One species (Aprasia striolata) responded to landscape structure variables but not to site-scale variables. Our second prediction, that site-scale variables would be the strongest predictors of abundance, was true for two species, but overall, our results were varied, with species responding at both scales. Examining species' responses to drivers at multiple spatial scales is essential for conservation management, as even species with low dispersal capacity such as reptiles can respond to processes occurring at large spatial scales.
Acoustic force spectroscopy Sitters, Gerrit; Kamsma, Douwe; Thalhammer, Gregor ...
Nature methods,
01/2015, Volume:
12, Issue:
1
Journal Article
Peer reviewed
Force spectroscopy has become an indispensable tool to unravel the structural and mechanochemical properties of biomolecules. Here we extend the force spectroscopy toolbox with an acoustic ...manipulation device that can exert forces from subpiconewtons to hundreds of piconewtons on thousands of biomolecules in parallel, with submillisecond response time and inherent stability. This method can be readily integrated in lab-on-a-chip devices, allowing for cost-effective and massively parallel applications.
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