Among grapevine diseases affecting European vineyards, Flavescence dorée (FD) and Grapevine Trunk Diseases (GTD) are considered the most relevant challenges for viticulture because of the damage they ...cause to vineyards. Unmanned Aerial Vehicle (UAV) multispectral imagery could be a powerful tool for the automatic detection of symptomatic vines. However, one major difficulty is to discriminate different kinds of diseases leading to similar leaves discoloration as it is the case with FD and GTD for red vine cultivars. The objective of this paper is to evaluate the potentiality of UAV multispectral imagery to separate: symptomatic vines including FD and GTD (Esca and black dead arm) from asymptomatic vines (Case 1) and FD vines from GTD ones (Case 2). The study sites are localized in the Gaillac and Minervois wine production regions (south of France). A set of seven vineyards covering five different red cultivars was studied. Field work was carried out between August and September 2016. In total, 218 asymptomatic vines, 502 FD vines and 199 GTD vines were located with a centimetric precision GPS. UAV multispectral images were acquired with a MicaSense RedEdge® sensor and were processed to ultimately obtain surface reflectance mosaics at 0.10 m ground spatial resolution. In this study, the potentiality of 24 variables (5 spectral bands, 15 vegetation indices and 4 biophysical parameters) are tested. The vegetation indices are selected for their potentiality to detect abnormal vegetation behavior in relation to stress or diseases. Among the biophysical parameters selected, three are directly linked to the leaf pigments content (chlorophyll, carotenoid and anthocyanin). The first step consisted in evaluating the performance of the 24 variables to separate symptomatic vine vegetation (FD or/and GTD) from asymptomatic vine vegetation using the performance indicators from the Receiver Operator Characteristic (ROC) Curve method (i.e., Area Under Curve or AUC, sensibility and specificity). The second step consisted in mapping the symptomatic vines (FD and/or GTD) at the scale of the field using the optimal threshold resulting from the ROC curve. Ultimately, the error between the level of infection predicted by the selected variables (proportion of symptomatic pixels by vine) and observed in the field (proportion of symptomatic leaves by vine) is calculated. The same methodology is applied to the three levels of analysis: by vineyard, by cultivar (Gamay, Fer Servadou) and by berry color (all red cultivars). At the vineyard and cultivar levels, the best variables selected varies. The AUC of the best vegetation indices and biophysical parameters varies from 0.84 to 0.95 for Case 1 and 0.74 to 0.90 for Case 2. At the berry color level, no variable is efficient in discriminating FD vines from GTD ones (Case 2). For Case 1, the best vegetation indices and biophysical parameter are Red Green Index (RGI)/ Green-Red Vegetation Index (GRVI) (based on the green and red spectral bands) and Car (linked to carotenoid content). These variables are more effective in mapping vines with a level of infection greater than 50%. However, at the scale of the field, we observe misclassified pixels linked to the presence of mixed pixels (shade, bare soil, inter-row vegetation and vine vegetation) and other factors of abnormal coloration (e.g., apoplectic vines).
Grapevine is largely cultivated in several parts of the world, and a spurt in its cultivation has occurred in the last two decades in grapevine cultivated areas of South and East Asia, mainly in ...China, India, Japan, Korea, Thailand, and Indonesia. Grapevine yellows (GY) represent one of the most important diseases in viticultural areas of the world, and they have been assigned to five different groups: aster yellows AY (16SrI), peanut witches’ broom PnWB (16SrII), X-disease (16SrIII), elm yellows EY (16SrV), and Stolbur (16SrXII). This study provides a comprehensive overview of the presence of phytoplasma strains and their vectors associated with GY complex, and their potential impact on viticulture of the South and East Asia. In general, both AY and EY were reported on several herbaceous plants and/or cultivated plants in South and East Asia, along with its vectors that were largely reported in China and sporadically in Japan. Interestingly, AY and EY are yet not found in South and East Asia grapevine regions; however, their presence on different plant species suggests the potential spread of the pathogens that may occur in grapevine regions in the near future. Additionally, a few reports also suggest the presence of Stolbur group in Asian countries, along with one study that found a Stolbur-related strain in China on
Vitis vinifera
. Similarly, PnWB was also frequently reported in India and China on several plant species, but not in grapes. Conversely, sporadic detections of phytoplasma strains related to X-disease in Thailand, South Korea, and China indicate that their potential influence in viticulture is rather negligible. Our review suggests that monitoring and control strategies against GY are essential in order to prevent epidemic phytoplasma spread, especially in vine-allocated areas in Asia.
Flavescence dorée (FD), caused by the phytoplasma
Candidatus
Phytoplasma vitis, is a major threat to vineyard survival in different European grape-growing areas. It has been recorded in French ...vineyards since the mid-1950s, and rapidly spread to other countries. In Portugal, the phytoplasma was first detected in the DOC region of ‘Vinhos Verdes’ in 2006, and reached the central region of the country in 2009. The infection causes strong accumulation of carbohydrates and phenolics in the mesophyll cells and a simultaneous decrease of chlorophylls, events accompanied by a down regulation of genes and proteins involved in the dark and light-dependent reactions and stabilization of the photosystem II (PSII). In the present study, to better elucidate the basis of the leaf chlorosis in infected grapevine cv. Loureiro, we studied the isoprenoid transcript–metabolite correlation in leaves from healthy and FD-infected vines. Specifically, targeted metabolome revealed that twenty-one compounds (out of thirty-two), including chlorophylls, carotenoids, quinones and tocopherols, were reduced in response to FD-infection. Thereafter, and consistently with the biochemical data, qPCR analysis highlighted a severe FD-mediated repression in key genes involved in isoprenoid biosynthetic pathways. A more diverse set of changes, on the contrary, was observed in the case of ABA metabolism. Principal component analysis (PCA) of all identified metabolites clearly separated healthy from FD-infected vines, therefore confirming that the infection strongly alters the biosynthesis of grapevine isoprenoids; additionally, forty-four genes and metabolites were identified as the components mostly explaining the variance between healthy and infected samples. Finally, transcript–metabolite network correlation analyses were exploited to display the main hubs of the infection process, which highlighted a strong role of
VvCHLG
,
VvVTE
and
VvZEP
genes and the chlorophylls intermediates aminolevulunic acid and porphobilinogen in response to FD infection. Overall, results indicated that the FD infection impairs the synthesis of isoprenoids, through the repression of key genes involved in the biosynthesis of chlorophylls, carotenoids, quinones and tocopherols.
Phytoplasmas are plant-pathogenic bacteria transmitted by hemipteran insects. The leafhopper
is a natural vector of chrysanthemum yellows phytoplasma (CYp) and a laboratory vector of flavescence ...dorée phytoplasma (FDp). The two phytoplasmas induce different effects on this species: CYp slightly improves whereas FDp negatively affects insect fitness. To investigate the molecular bases of these different responses, transcriptome sequencing (RNA-seq) analysis of
infected with either CYp or FDp was performed. The sequencing provided the first
transcriptome assembly for a phytoplasma vector and a starting point for further analyses on differentially regulated genes, mainly related to immune system and energy metabolism. Insect phenoloxidase activity, immunocompetence, and body pigmentation were measured to investigate the immune response, while respiration and movement rates were quantified to confirm the effects on energy metabolism. The activation of the insect immune response upon infection with FDp, which is not naturally transmitted by
, confirmed that this bacterium is mostly perceived as a potential pathogen. Conversely, the acquisition of CYp, which is naturally transmitted by
, seems to increase the insect fitness by inducing a prompt response to stress. This long-term relationship is likely to improve survival and dispersal of the infected insect, thus enhancing the opportunity of phytoplasma transmission.
The aim of this work was to evaluate the susceptibility to flavescence dorée (FD) of 12 Vitis vinifera cultivars grown in Piedmont, and representative of the wine‐making tradition of this area. The ...experiments were conducted under controlled conditions to ensure constant infection pressure. Test plants were ex vitro potted vines, singly inoculated with four Scaphoideus titanus infected by FD‐C phytoplasma (FDp), under greenhouse conditions. Vines were tested for FDp at 5 and 8 weeks postinoculation (wpi) and the phytoplasma load was measured in leaves and roots at 8 wpi. Within the 14 V. vinifera accessions (belonging to 12 cultivars), three susceptibility clusters were identified. Cultivars within the low susceptibility group showed low phytoplasma loads and low percentages of infected plants, suggesting a tolerant behaviour. To confirm these results, four Vitis cultivars, representing extremes of FD susceptibility from low to high, were grafted onto Kober 5BB rootstocks and inoculated with laboratory‐infected S. titanus, under semi‐field conditions. The transmission experiments onto grafted cuttings confirmed that susceptibility to the disease depends on the scion genotype. The data indicated that none of the tested V. vinifera genotypes are resistant to FD, although some cultivars with low susceptibility are available, and can be explored for identifying genetic traits involved in disease tolerance/resistance. Moreover, ranking Vitis genotypes for their susceptibility to FD is in itself a valuable tool to support vine growers in their decision management, by helping them to choose the most appropriate varieties according to their specific FD epidemiological contexts.
Fourteen grapevine accessions of Piedmontese varieties were screened for susceptibility to flavescence dorée on inoculation with infective Scaphoideus titanus. High, medium, and low susceptibility clusters were identified.
An outbreak of Spartium witches’ broom (SpaWB) in Sicily prompted us to identify and characterize associated phytoplasmas. Over 80 samples of Spanish broom (Spartium junceum) and around 270 ...individuals of the potential vector Livilla spectabilis were collected and analysed. Single and mixed infections of 16SrV and ‘Candidatus Phytoplasma spartii’ were detected in Spanish broom samples and for the first time in L. spectabilis. The 16SrV isolates were further characterized by multilocus sequence typing (MLST) to determine their phylogenetic relationship with flavescence dorée phytoplasma (FDp) and to evaluate the risk of host‐jumping to grapevine. Phylogenetic analysis of most of the analysed genes using the MLST approach grouped S. junceum 16SrV‐C isolates with FDp isolates infecting grapevine and Scaphoideus titanus. Notably, phylogenetic analysis of the vmpA gene clustered the S. junceum isolates with FDp genotypes transmitted by S. titanus. This study extends the knowledge of SpaWB epidemiology, focusing on the possible risk of a 16SrV host jump from Spanish broom to grapevine. Spanish broom was identified as a reservoir and potential inoculum source of phytoplasmas that cause severe disease in cultivated crops. Furthermore, the L. spectabilis psyllid may be involved in the epidemiology of this 16SrV‐C phytoplasma, although in the absence of in vivo transmission trials. The study further confirms the strong ability of phytoplasmas to adapt to new hosts and vectors, thus leading to potential phytosanitary emergencies.
Spanish broom is a reservoir and potential inoculum source of phytoplasmas that cause severe disease on cultivated crops. Involvement of the L. spectabilis psyllid in the epidemiology of this 16SrV‐C phytoplasmas is postulated.
In Europe the most devastating phytoplasma associated with grapevine yellows (GY) diseases is a quarantine pest, flavescence dorée (FDp), from the 16SrV taxonomic group. The on‐site detection of FDp ...with an affordable device would contribute to faster and more efficient decisions on the control measures for FDp. Therefore, a real‐time isothermal LAMP assay for detection of FDp was validated according to the EPPO standards and MIQE guidelines. The LAMP assay was shown to be specific and extremely sensitive, because it detected FDp in all leaf samples that were determined to be FDp infected using quantitative real‐time PCR. The whole procedure of sample preparation and testing was designed and optimized for on‐site detection and can be completed in one hour. The homogenization procedure of the grapevine samples (leaf vein, flower or berry) was optimized to allow direct testing of crude homogenates with the LAMP assay, without the need for DNA extraction, and was shown to be extremely sensitive.
Today, we are faced with an increase in the impact of pesticides on the environment, which is becoming a real concern for most agricultural production systems, including vineyards, for a number of ...reasons, such as the resistance of pest populations to pesticides, the lethal and sublethal effects of pesticides on non-target species, the increase in new invasive pests, the extension of the geographical range of pests due to climate change, and, finally, human health problems. Against this backdrop, the adoption of solutions based on the reproductive behavioral ecology of pests is a subject of prominent (major) interest for the coming decades. Crop pests and, more specifically, disease vectors use sensory cues throughout their life cycle for many fundamental behaviors and in particular for mating, the critical step in population growth. In particular, a large proportion of arthropod crop pests rely on chemical and/or vibroacoustic communication to mate. Several thousand sex pheromones have been identified in insects, most of which can be used either as synthetic baits to trap pests or as behavioral modifiers (e.g., pheromone-mediated mating disruption). Applied biotremology is also emerging as a new discipline for sustainable pest control. Field experiments on vibratotional mating disruption against grapevine leafhoppers are currently ongoing, with promising results. Here we present mating disruption strategies that can be implemented in crop protection, in particular against the main pests and vectors present/occurring in grape production.
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