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  • GRETA analytics: Communicat... GRETA analytics: Communicating the spatial dimension of energy citizenship using a collaborative Shiny app
    Lieth, Jonas; Abel, Dennis; Jünger, Stefan SoftwareX, September 2024, 2024-09-00, Volume: 27
    Journal Article
    Peer reviewed
    Open access

    Research output from inter- and trans-disciplinary research projects is challenging to store, link, analyze, and communicate among stakeholders and researchers from other fields. Datasets, models, ...
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  • Sample size assessments for... Sample size assessments for thermal physiology studies: An R package and R Shiny application
    van Steenderen, Clarke J. M.; Sutton, Guy F.; Owen, Candice A. ... Physiological entomology, 12/2023, Volume: 48, Issue: 4
    Journal Article
    Peer reviewed
    Open access

    Abstract Required sample sizes for a study need to be carefully assessed to account for logistics, cost, ethics and statistical rigour. For example, many studies have shown that methodological ...
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  • MAKING BAYESIAN DISEASE MAP... MAKING BAYESIAN DISEASE MAPPING EASY AND INTERACTIVE: AN R SHINY APPLICATION
    Aswi, Aswi; Tiro, Muhammad Arif; Sudarmin, Sudarmin ... Media statistika (Online), 02/2024, Volume: 16, Issue: 2
    Journal Article
    Peer reviewed
    Open access

    Spatial analysis of count data is important in epidemiology and other domains to identify spatial patterns. While Bayesian spatial models are a popular approach, they do require detailed knowledge of ...
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  • Surface-enhanced Raman spec... Surface-enhanced Raman spectroscopy (SERS)-based immunochromatographic assay (ICA) for the simultaneous detection of two pyrethroid pesticides
    Li, Xiaozhou; Yang, Tianyue; Song, Youtao ... Sensors and actuators. B, Chemical, 03/2019, Volume: 283
    Journal Article
    Peer reviewed

    •An ICA-SERS method was developed for the simultaneous duplex detection of two pyrethroid pesticides.•ICA based on competitive immunosorbence shows efficiency for detecting small pesticide ...
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  • Software Application Profil... Software Application Profile: ShinyDataSHIELD—an R Shiny application to perform federated non-disclosive data analysis in multicohort studies
    Escribà-Montagut, Xavier; Marcon, Yannick; Avraam, Demetris ... International journal of epidemiology, 02/2023, Volume: 52, Issue: 1
    Journal Article
    Peer reviewed
    Open access

    Abstract Motivation DataSHIELD is an open-source software infrastructure enabling the analysis of data distributed across multiple databases (federated data) without leaking individuals’ information ...
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  • Correlation AnalyzeR: funct... Correlation AnalyzeR: functional predictions from gene co-expression correlations
    Miller, Henry E; Bishop, Alexander J R BMC bioinformatics, 04/2021, Volume: 22, Issue: 1
    Journal Article
    Peer reviewed
    Open access

    Co-expression correlations provide the ability to predict gene functionality within specific biological contexts, such as different tissue and disease conditions. However, current gene co-expression ...
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  • PlantC2U: deep learning of ... PlantC2U: deep learning of cross-species sequence landscapes predicts plastid C-to-U RNA editing in plants
    Xu, Chaoqun; Li, Jing; Song, Ling-Yu ... Journal of experimental botany, 2024-Apr-15, 2024-04-15, 20240415, Volume: 75, Issue: 8
    Journal Article
    Peer reviewed

    In plants, C-to-U RNA editing mainly occurs in plastid and mitochondrial transcripts, which contributes to a complex transcriptional regulatory network. More evidence reveals that RNA editing plays ...
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  • Bridging the gap between mo... Bridging the gap between models and users: A lightweight mobile interface for optimized farming decisions in interactive modeling sessions
    Mössinger, Johannes; Troost, Christian; Berger, Thomas Agricultural systems, January 2022, 2022-01-00, Volume: 195
    Journal Article
    Peer reviewed
    Open access

    Whole-farm mathematical programming (MP) models help to understand the complex implications of farm planning decisions taking the full agricultural system into account. Applying optimization models ...
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  • A Multiobjective Optimizati... A Multiobjective Optimization Approach to Pulmonary Rehabilitation Effectiveness in COPD
    Cabral, Jorge; Afreixo, Vera; J Silva, Cristiana ... Statistics, optimization & information computing, 2023, Volume: 11, Issue: 2
    Journal Article
    Open access

    Chronic obstructive pulmonary disease (COPD) is a common disease that accounts for a significant individual and societal burden. Pulmonary rehabilitation (PR) is a key management strategy but it is ...
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  • Sample size and power calcu... Sample size and power calculations for causal mediation analysis: A Tutorial and Shiny App
    Qin, Xu Behavior research methods, 03/2024, Volume: 56, Issue: 3
    Journal Article
    Peer reviewed
    Open access

    When designing a study for causal mediation analysis, it is crucial to conduct a power analysis to determine the sample size required to detect the causal mediation effects with sufficient power. ...
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