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Luo, Dahai; Ding, Steve C.; Vela, Adriana; Kohlway, Andrew; Lindenbach, Brett D.; Pyle, Anna Marie
Cell, 10/2011, Volume: 147, Issue: 2Journal Article
Intracellular RIG-I-like receptors (RLRs, including RIG-I, MDA-5, and LGP2) recognize viral RNAs as pathogen-associated molecular patterns (PAMPs) and initiate an antiviral immune response. To understand the molecular basis of this process, we determined the crystal structure of RIG-I in complex with double-stranded RNA (dsRNA). The dsRNA is sheathed within a network of protein domains that include a conserved “helicase” domain (regions HEL1 and HEL2), a specialized insertion domain (HEL2i), and a C-terminal regulatory domain (CTD). A V-shaped pincer connects HEL2 and the CTD by gripping an α-helical shaft that extends from HEL1. In this way, the pincer coordinates functions of all the domains and couples RNA binding with ATP hydrolysis. RIG-I falls within the Dicer-RIG-I clade of the superfamily 2 helicases, and this structure reveals complex interplay between motor domains, accessory mechanical domains, and RNA that has implications for understanding the nanomechanical function of this protein family and other ATPases more broadly. Display omitted ► Structural analysis of RIG-I shows how it recognizes and encases double-stranded RNA ► A pincer motif formed by the helicase domain organizes RIG-I for RNA binding ► Functional analyses confirm the use of the pincer motif in vitro and in vivo ► Structure offers mechanistic insight into SF2 family and Dicer-related helicases The innate immune receptor RIG-I wraps around viral dsRNA. Movements within the helicase domain suggest a mechanism for complex assembly and oligomerization of RIG-I along the RNA.
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