Summary
Soil photoautotrophic prokaryotes and micro‐eukaryotes – known as soil algae – are, together with heterotrophic microorganisms, a constitutive part of the microbiome in surface soils. Similar ...to plants, they fix atmospheric carbon (C) through photosynthesis for their own growth, yet their contribution to global and regional biogeochemical C cycling still remains quantitatively elusive.
Here, we compiled an extensive dataset on soil algae to generate a better understanding of their distribution across biomes and predict their productivity at a global scale by means of machine learning modelling.
We found that, on average, (5.5 ± 3.4) × 106 algae inhabit each gram of surface soil. Soil algal abundance especially peaked in acidic, moist and vegetated soils. We estimate that, globally, soil algae take up around 3.6 Pg C per year, which corresponds to c. 6% of the net primary production of terrestrial vegetation.
We demonstrate that the C fixed by soil algae is crucial to the global C cycle and should be integrated into land‐based efforts to mitigate C emissions.
Background and Aims Alterations in snow cover driven by climate change may impact ecosystem functioning, including biogeochemistry and soil (microbial) processes. We elucidated the effects of snow ...cover manipulation (SCM) on above-and belowground processes in a temperate peatland. Methods In a Swiss mountain-peatland we manipulated snow cover (addition, removal and control), and assessed the effects on Andromeda polifolia root enzyme activity, soil microbial community structure, and leaf tissue and soil biogeochemistry. Results Reduced snow cover produced warmer soils in our experiment while increased snow cover kept soil temperatures close-to-freezing. SCM had a major influence on the microbial community, and prolonged 'close-to-freezing' temperatures caused a shift in microbial communities toward fungal dominance. Soil temperature largely explained soil microbial structure, while other descriptors such as root enzyme activity and pore-water chemistry interacted less with the soil microbial communities. Conclusions We envisage that SCM-driven changes in the microbial community composition could lead to substantial changes in trophic fluxes and associated ecosystem processes. Hence, we need to improve our understanding on the impact of frost and freeze-thaw cycles on the microbial food web and its implications for peatland ecosystem processes in a changing climate; in particular for the fate of the sequestered carbon.
Climate change will influence plant photosynthesis by altering patterns of temperature and precipitation, including their variability and seasonality. Both effects may be important for peatlands as ...the carbon (C) sink potential of these ecosystems depends on the balance between plant C uptake through photosynthesis and microbial decomposition. Here, we show that the effect of climate warming on Sphagnum community photosynthesis toggles from positive to negative as the peatland goes from rainy to dry periods during summer. More particularly, we show that mechanisms of compensation among the dominant Sphagnum species (Sphagnum fallax and Sphagnum medium) stabilize the average photosynthesis and productivity of the Sphagnum community during summer despite rising temperatures and frequent droughts. While warming had a negligible effect on S. medium photosynthetic capacity (Amax) during rainy periods, Amax of S. fallax increased by 40%. On the opposite, warming exacerbated the negative effects of droughts on S. fallax with an even sharper decrease of its Amax while S. medium Amax remained unchanged. S. medium showed a remarkable resistance to droughts due to anatomical traits favouring its water holding capacity. Our results show that different phenotypic plasticity among dominant Sphagnum species allow the community to cope with rising temperatures and repeated droughts, maintaining similar photosynthesis and productivity over summer in warmed and control conditions. These results are important because they provide information on how soil water content may modulate the effects of climate warming on Sphagnum productivity in boreal peatlands. It further confirms the transitory nature of warming‐induced photosynthesis benefits in boreal systems and highlights the vulnerability of the ecosystem to excess warming and drying.
Sphagnum photosynthesis supports carbon (C) assimilation in peatlands—a major C pool. New research shows that Sphagnum primary productivity resists climate warming over the growing season. Species phenotypic plasticity is the key to maintain C assimilation under climate warming. The conservation of the full peat bog species pool appears as the chief priority in the mitigation of peatland impacts on climate change.
Most of the carbon accumulated into peatlands is derived from Sphagnum mosses. During peatland development, the relative share of vascular plants and Sphagnum mosses in the plant community changes, ...which impacts ecosystem functions. Little is known on the successional development of functional plant traits or functional diversity in peatlands, although this could be a key for understanding the mechanisms behind peatland resistance to climate change. Here we aim to assess how functionality of successive plant communities change along the autogenic peatland development and the associated environmental gradients, namely peat thickness and pH, and to determine whether trait trade‐offs during peatland succession are analogous between vascular plant and moss communities.
We collected plant community and trait data on successional peatland gradients from post‐glacial rebound areas in coastal Finland, Sweden and Russia, altogether from 47 peatlands. This allowed us to analyse the changes in community‐weighted mean trait values and functional diversity (diversity of traits) during peatland development.
Our results show comparative trait trade‐offs from acquisitive species to conservative species in both vascular plant and Sphagnum moss communities during peatland development. However, mosses had higher resistance to environmental change than vascular plant communities. This was seen in the larger proportion of intraspecific trait variation than species turnover in moss traits, while the proportions were opposite for vascular plants. Similarly, the functional diversity of Sphagnum communities increased during the peatland development, while the opposite occurred for vascular plants. Most of the measured traits showed a phylogenetic signal. More so, the species common to old successional stages, namely Ericacae and Sphagna from subgroup Acutifolia were detected as most similar to their phylogenetic neighbours.
Synthesis. During peatland development, vegetation succession leads to the dominance of conservative plant species accustomed to high stress. At the same time, the autogenic succession and ecological engineering of Sphagna leads to higher functional diversity and intraspecific variability, which together indicate higher resistance towards environmental perturbations.
During peatland development, vegetation succession leads to the dominance of conservative plant species accustomed to high stress. At the same time, the autogenic succession and ecological engineering of Sphagna leads to higher functional diversity and intraspecific variability, which together indicate higher resistance towards environmental perturbations.
Peatlands contain approximately one third of all soil organic carbon (SOC). Warming can alter above‐ and belowground linkages that regulate soil organic carbon dynamics and C‐balance in peatlands. ...Here we examine the multiyear impact of in situ experimental warming on the microbial food web, vegetation, and their feedbacks with soil chemistry. We provide evidence of both positive and negative impacts of warming on specific microbial functional groups, leading to destabilization of the microbial food web. We observed a strong reduction (70%) in the biomass of top‐predators (testate amoebae) in warmed plots. Such a loss caused a shortening of microbial food chains, which in turn stimulated microbial activity, leading to slight increases in levels of nutrients and labile C in water. We further show that warming altered the regulatory role of Sphagnum‐polyphenols on microbial community structure with a potential inhibition of top predators. In addition, warming caused a decrease in Sphagnum cover and an increase in vascular plant cover. Using structural equation modelling, we show that changes in the microbial food web affected the relationships between plants, soil water chemistry, and microbial communities. These results suggest that warming will destabilize C and nutrient recycling of peatlands via changes in above‐ and belowground linkages, and therefore, the microbial food web associated with mosses will feedback positively to global warming by destabilizing the carbon cycle. This study confirms that microbial food webs thus constitute a key element in the functioning of peatland ecosystems. Their study can help understand how mosses, as ecosystem engineers, tightly regulate biogeochemical cycling and climate feedback in peatlands
Although microorganisms are the primary drivers of biogeochemical cycles, the structure and functioning of microbial food webs are poorly studied. This is the case in Sphagnum peatlands, where ...microbial communities play a key role in the global carbon cycle. Here, we explored the structure of the microbial food web from a Sphagnum peatland by analyzing (1) the density and biomass of different microbial functional groups, (2) the natural stable isotope (δ 13 C and δ 15 N) signatures of key microbial consumers (testate amoebae), and (3) the digestive vacuole contents of Hyalosphenia papilio, the dominant testate amoeba species in our system. Our results showed that the feeding type of testate amoeba species (bacterivory, algivory, or both) translates into their trophic position as assessed by isotopic signatures. Our study further demonstrates, for H. papilio, the energetic benefits of mixotrophy when the density of its preferential prey is low. Overall, our results show that testate amoebae occupy different trophic levels within the microbial food web, depending on their feeding behavior, the density of their food resources, and their metabolism (i.e., mixotrophy vs. heterotrophy). Combined analyses of predation, community structure, and stable isotopes now allow the structure of microbial food webs to be more completely described, which should lead to improved models of microbial community function.
In peatland ecosystems, plant communities mediate a globally significant carbon store. The effects of global environmental change on plant assemblages are expected to be a factor in determining how ...ecosystem functions such as carbon uptake will respond. Using vegetation data from 56 Sphagnum-dominated peat bogs across Europe, we show that in these ecosystems plant species aggregate into two major clusters that are each defined by shared response to environmental conditions. Across environmental gradients, we find significant taxonomic turnover in both clusters. However, functional identity and functional redundancy of the community as a whole remain unchanged. This strongly suggests that in peat bogs, species turnover across environmental gradients is restricted to functionally similar species. Our results demonstrate that plant taxonomic and functional turnover are decoupled, which may allow these peat bogs to maintain ecosystem functioning when subject to future environmental change.
The subordinate insurance hypothesis suggests that highly diverse communities contain greater numbers of subordinate species than less diverse communities. It has previously been reported that ...subordinate species can improve grassland productivity during drought, but the underlying mechanisms remain undetermined. Using a combination of subordinate species removal and summer drought, we show that soil processes play a critical role in community resistance to drought. Interestingly, subordinate species drive soil microbial community structure and largely mitigate the effect of drought on grassland soil functioning. Our results highlight subordinate species in shifting the balance within the phospholipid fatty acid (PLFA) microbial community towards more fungal dominance. Fungal communities promoted by subordinate species were more resistant to drought and maintained higher rates of litter decomposition and soil respiration. These results emphasize the important role of subordinate species in mitigating drought effects on soil ecosystem functions. Reciprocal effects between fungi and subordinate species explain also how subordinate species better resisted to drought conditions. Our results point to a delayed plant–soil feedback following environmental perturbation. Additionally, they extend the diversity insurance hypothesis by showing that more diverse communities not only contain species well adapted to perturbations, but also species with higher impacts on soil microbial communities and related ecosystem functions.
Extreme climate events are predicted to become more frequent and intense. Their ecological impacts, particularly on carbon cycling, can differ in relation to ecosystem sensitivity. Peatlands, being ...characterized by peat accumulation under waterlogged conditions, can be particularly sensitive to climate extremes if the climate event increases soil oxygenation. However, a mechanistic understanding of peatland responses to persistent climate extremes is still lacking, particularly in terms of aboveground–belowground feedback. Here, we present the results of a transplantation experiment of peat mesocosms from high to low altitude in order to simulate, during 3 years, a mean annual temperature c. 5 °C higher and a mean annual precipitation c. 60% lower. Specifically, we aim at understanding the intensity of changes for a set of biogeochemical processes and their feedback on carbon accumulation. In the transplanted mesocosms, plant productivity showed a species‐specific response depending on plant growth forms, with a significant decrease (c. 60%) in peat moss productivity. Soil respiration almost doubled and Q10 halved in the transplanted mesocosms in combination with an increase in activity of soil enzymes. Spectroscopic characterization of peat chemistry in the transplanted mesocosms confirmed the deepening of soil oxygenation which, in turn, stimulated microbial decomposition. After 3 years, soil carbon stock increased only in the control mesocosms whereas a reduction in mean annual carbon accumulation of c. 30% was observed in the transplanted mesocosms. Based on the above information, a structural equation model was built to provide a mechanistic understanding of the causal connections between peat moisture, vegetation response, soil respiration and carbon accumulation. This study identifies, in the feedback between plant and microbial responses, the primary pathways explaining the reduction in carbon accumulation in response to recurring climate extremes in peat soils.
Enviro–climatic changes are thought to be causing alterations in ecosystem processes through shifts in plant and microbial communities; however, how links between plant and microbial communities ...change with enviro–climatic change is likely to be less straightforward but may be fundamental for many ecological processes. To address this, we assessed the composition of the plant community and the prokaryotic community – using amplicon‐based sequencing – of three European peatlands that were distinct in enviro–climatic conditions. Bipartite networks were used to construct site‐specific plant–prokaryote co‐occurrence networks. Our data show that between sites, plant and prokaryotic communities differ and that turnover in interactions between the communities was complex. Essentially, turnover in plant–microbial interactions is much faster than turnover in the respective communities. Our findings suggest that network rewiring does largely result from novel or different interactions between species common to all realised networks. Hence, turnover in network composition is largely driven by the establishment of new interactions between a core community of plants and microorganisms that are shared among all sites. Taken together our results indicate that plant–microbe associations are context dependent, and that changes in enviro–climatic conditions will likely lead to network rewiring. Integrating turnover in plant–microbe interactions into studies that assess the impact of enviro–climatic change on peatland ecosystems is essential to understand ecosystem dynamics and must be combined with studies on the impact of these changes on ecosystem processes.
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