We present a new, simple method to predict activity-induced radial velocity (RV) variations using high-precision time series photometry. It is based on insights from a simple spot model, has only two ...free parameters (one of which can be estimated from the light curve) and does not require knowledge of the stellar rotation period. We test the method on simulated data and illustrate its performance by applying it to MOST/SOPHIE observations of the planet host star HD 189733, where it gives almost identical results to much more sophisticated but highly degenerate models, and synthetic data for the Sun, where we demonstrate that it can reproduce variations well below the m s−1 level. We also apply it to quarter 1 data for Kepler transit candidate host stars, where it can be used to estimate RV variations down to the 2-3 m s−1 level, and show that RV amplitudes above that level may be expected for approximately two-thirds of the candidates we examined.
The hot Jupiter HD 189733b is the most extensively observed exoplanet. Its atmosphere has been detected and characterized in transmission and eclipse spectroscopy, and its phase curve measured at ...several wavelengths. This paper brings together the results of our campaign to obtain the complete transmission spectrum of the atmosphere of this planet from UV to infrared with the Hubble Space Telescope, using the STIS, ACS and WFC3 instruments. We provide a new tabulation of the transmission spectrum across the entire visible and infrared range. The radius ratio in each wavelength band was re-derived, where necessary, to ensure a consistent treatment of the bulk transit parameters and stellar limb darkening. Special care was taken to correct for, and derive realistic estimates of the uncertainties due to, both occulted and unocculted star spots.
The combined spectrum is very different from the predictions of cloud-free models for hot Jupiters: it is dominated by Rayleigh scattering over the whole visible and near-infrared range, the only detected features being narrow sodium and potassium lines. We interpret this as the signature of a haze of condensate grains extending over at least five scaleheights. We show that a dust-dominated atmosphere could also explain several puzzling features of the emission spectrum and phase curves, including the large amplitude of the phase curve at 3.6 μm, the small hotspot longitude shift and the hot mid-infrared emission spectrum. We discuss possible compositions and derive some first-order estimates for the properties of the putative condensate haze/clouds. We finish by speculating that the dichotomy between the two observationally defined classes of hot Jupiter atmospheres, of which HD 189733b and HD 209458b are the prototypes, might not be whether they possess a temperature inversion, but whether they are clear or dusty. We also consider the possibility of a continuum of cloud properties between hot Jupiters, young Jupiters and L-type brown dwarfs.
Since the discovery of short-period exoplanets a decade ago, photometric surveys have been recognized as a feasible method to detect transiting hot Jupiters. Many transit surveys are now underway, ...with instruments ranging from 10-cm cameras to the Hubble Space Telescope. However, the results of these surveys have been much below the expected capacity, estimated in the dozens of detections per year. One of the reasons is the presence of systematics (‘red noise’) in photometric time-series. In general, yield predictions assume uncorrelated noise (‘white noise’). In this paper, we show that the effect of red noise on the detection threshold and the expected yields cannot be neglected in typical ground-based surveys. We develop a simple method to determine the effect of red noise on photometric planetary transit detections. This method can be applied to determine detection thresholds for transit surveys. We show that the detection threshold in the presence of systematics can be much higher than that with the assumption of white noise, and obeys a different dependence on magnitude, orbital period and the parameters of the survey. Our method can also be used to estimate the significance level of a planetary transit candidate (to select promising candidates for spectroscopic follow-up). We apply our method to the OGLE planetary transit search, and show that it provides a reliable description of the actual detection threshold with real correlated noise. We point out in what way the presence of red noise could be at least partly responsible for the dearth of transiting planet detections from existing surveys, and examine some possible adaptations in survey planning and strategy. Finally, we estimate the photometric stability necessary to the detection of transiting ‘hot Neptunes’.
The transit spectrum of the exoplanet HD 189733b has recently been obtained between 0.55 and 1.05 μm. Here we present an analysis of this spectrum. We develop first-order equations to interpret ...absorption spectra. In the case of HD 189733b, we show that the observed slope of the absorption as a function of wavelength is characteristic of extinction proportional to the inverse of the fourth power of the wavelength ($\propto$$\lambda^{-4}$). Assuming an extinction dominated by Rayleigh scattering, we derive an atmospheric temperature of 1340 ± 150 K. If molecular hydrogen is responsible for the Rayleigh scattering, the atmospheric pressure at the planetary characteristic radius of 0.1564 stellar radius must be 410 ± 30 mbar. However the preferred scenario is scattering by condensate particles. Using the Mie approximation, we find that the particles must have a low value for the imaginary part of the refraction index. We identify MgSiO3 as a possible abundant condensate whose particle size must be between ~10-2 and ~10-1 μm. For this condensate, assuming solar abundance, the pressure at 0.1564 stellar radius is found to be between a few microbars and few millibars, and the temperature is found to be in the range 1340–1540 K, and both depend on the particle size.
Transmission spectroscopy, which consists of measuring the wavelength-dependent absorption of starlight by a planet's atmosphere during a transit, is a powerful probe of atmospheric composition. ...However, the expected signal is typically orders of magnitude smaller than instrumental systematics and the results are crucially dependent on the treatment of the latter. In this paper, we propose a new method to infer transit parameters in the presence of systematic noise using Gaussian processes, a technique widely used in the machine learning community for Bayesian regression and classification problems. Our method makes use of auxiliary information about the state of the instrument, but does so in a non-parametric manner, without imposing a specific dependence of the systematics on the instrumental parameters, and naturally allows for the correlated nature of the noise. We give an example application of the method to archival NICMOS transmission spectroscopy of the hot Jupiter HD 189733, which goes some way towards reconciling the controversy surrounding this data set in the literature. Finally, we provide an appendix giving a general introduction to Gaussian processes for regression, in order to encourage their application to a wider range of problems.
We report Hubble Space Telescope optical to near-infrared transmission spectroscopy of the hot-Jupiter WASP-6b, measured with the Space Telescope Imaging Spectrograph and Spitzer's InfraRed Array ...Camera. The resulting spectrum covers the range 0.29–4.5 μm. We find evidence for modest stellar activity of WASP-6 and take it into account in the transmission spectrum. The overall main characteristic of the spectrum is an increasing radius as a function of decreasing wavelength corresponding to a change of Δ (R
p / R
*) = 0.0071 from 0.33 to 4.5 μm. The spectrum suggests an effective extinction cross-section with a power law of index consistent with Rayleigh scattering, with temperatures of 973 ± 144 K at the planetary terminator. We compare the transmission spectrum with hot-Jupiter atmospheric models including condensate-free and aerosol-dominated models incorporating Mie theory. While none of the clear-atmosphere models is found to be in good agreement with the data, we find that the complete spectrum can be described by models that include significant opacity from aerosols including Fe-poor Mg2SiO4, MgSiO3, KCl and Na2S dust condensates. WASP-6b is the second planet after HD 189733b which has equilibrium temperatures near ∼1200 K and shows prominent atmospheric scattering in the optical.
The nearby transiting planet HD 189733b was observed during three transits with the Advanced Camera for Surveys of the Hubble Space Telescope in spectroscopic mode. The resulting time-series of 675 ...spectra covers the 550–1050 nm range, with a resolution element of ∼8 nm, at extremely high accuracy (signal-to-noise ratio up to 10 000 in 50-nm intervals in each individual spectrum). Using these data, we disentangle the effects of limb darkening, measurement systematics and spots on the surface of the host star, to calculate the wavelength dependence of the effective transit radius to an accuracy of ∼50 km. This constitutes the ‘transmission spectrum’ of the planetary atmosphere. It indicates at each wavelength at what height the planetary atmosphere becomes opaque to the grazing stellar light during the transit. In this wavelength range, strong features due to sodium, potassium and water are predicted by atmosphere models for a planet like HD 189733b, but they can be hidden by broad absorption from clouds or hazes higher up in the atmosphere. We observed an almost featureless transmission spectrum between 550 and 1050 nm, with no indication of the expected sodium or potassium atomic absorption features. Comparison of our results with the transit radius observed in the near and mid-infrared (2–8 μm), and the slope of the spectrum, suggest the presence of a haze of submicrometre particles in the upper atmosphere of the planet.
We present a re-analysis of archival HST/NICMOS transmission spectroscopy of three exoplanet systems: HD 189733, GJ-436 and XO-1. Detections of several molecules, including H2O, CH4 and CO2, have ...been claimed for HD 189733 and XO-1, but similarly sized features are attributed to systematic noise for GJ-436. The data consist of time-series grism spectra covering a planetary transit. After extracting light curves in independent wavelength channels, we use a linear decorrelation technique to account for instrumental systematics (which is becoming standard in the field), and measure the planet-to-star radius ratio as a function of wavelength. We use a residual permutation algorithm to calculate the uncertainties, in an effort to evaluate the effects of systematic noise on the resulting transmission spectra. For HD 189733, the uncertainties in the transmission spectrum are significantly larger than those previously reported. We also find that the transmission spectrum is considerably altered when using different out-of-transit orbits to remove the systematics, when some parameters are left out of the decorrelation procedure, or when we perform the decorrelation with quadratic functions rather than linear functions. Given that there is no physical reason to believe that the baseline flux should be modelled as a linear function of any particular set of parameters, we interpret this as evidence that the linear decorrelation technique is not a robust method to remove systematic effects from the light curves for each wavelength channel. For XO-1, the parameters measured to decorrelate the light curves would require extrapolation to the in-transit orbit to remove the systematics, and we cannot reproduce the previously reported results. We conclude that the resulting NICMOS transmission spectra are too dependent on the method used to remove systematics to be considered robust detections of molecular species in planetary atmospheres, although the presence of these molecules is not ruled out.
ABSTRACT We present Hubble Space Telescope (HST) optical and near-ultraviolet transmission spectra of the transiting hot Jupiter HD189733b, taken with the repaired Space Telescope Imaging ...Spectrograph (STIS) instrument. The resulting spectra cover the range 2900-5700Å and reach per exposure signal-to-noise ratio levels greater than 11000 within a 500-Å bandwidth. We used time series spectra obtained during two transit events to determine the wavelength dependence of the planetary radius and measure the exoplanet's atmospheric transmission spectrum for the first time over this wavelength range. Our measurements, in conjunction with existing HST spectra, now provide a broad-band transmission spectrum covering the full optical regime. The STIS data also show unambiguous evidence of a large occulted stellar spot during one of our transit events, which we use to place constraints on the characteristics of the K dwarf's stellar spots, estimating spot temperatures around Teff 4250K. With contemporaneous ground-based photometric monitoring of the stellar variability, we also measure the correlation between the stellar activity level and transit-measured planet-to-star radius contrast, which is in good agreement with predictions. We find a planetary transmission spectrum in good agreement with that of Rayleigh scattering from a high-altitude atmospheric haze as previously found from HST Advanced Camera for Surveys. The high-altitude haze is now found to cover the entire optical regime and is well characterized by Rayleigh scattering. These findings suggest that haze may be a globally dominant atmospheric feature of the planet which would result in a high optical albedo at shorter optical wavelengths. PUBLICATION ABSTRACT
Cell wall proteins: a new insight through proteomics Jamet, Elisabeth; Canut, Hervé; Boudart, Georges ...
Trends in plant science,
2006, 2006-Jan, 2006-1-00, 20060101, 2006-01, Letnik:
11, Številka:
1
Journal Article
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Cell wall proteins are essential constituents of plant cell walls; they are involved in modifications of cell wall components, wall structure, signaling and interactions with plasma membrane proteins ...at the cell surface. The application of proteomic approaches to the cell wall compartment raises important questions: are there technical problems specific to cell wall proteomics? What kinds of proteins can be found in
Arabidopsis walls? Are some of them unexpected? What sort of post-translational modifications have been characterized in cell wall proteins to date? The purpose of this review is to discuss the experimental results obtained to date using proteomics, as well as some of the new questions challenging future research.