For seed crops, yield is the cumulative result of both source and sink strength for photoassimilates and nutrients over the course of seed development. Source strength for photoassimilates is ...dictated by both net photosynthetic rate and the rate of photoassimilate remobilisation from source tissues. This review focuses on the current understanding of how the source-sink relationship in crop plants influences rates of yield development and the resilience of yield and nutritional quality. We present the limitations of current approaches to accurately measure sink strength and emphasize differences in coordination between photosynthesis and yield under varying environmental conditions. We highlight the potential to exploit source-sink dynamics, in order to improve yields and emphasize the importance of resilience in yield and nutritional quality with implications for plant breeding strategies.
Drought substantially limits seed yield of common bean (Phaseolus vulgaris L.) in the tropics. Understanding the interaction of drought on yield and the nutrient concentration of the seed is vital in ...order to supply nutrition to the millions of consumers who rely on common bean as a staple crop. Nevertheless, the impact of drought on common bean for both yield and nutrient concentration has not yet been concurrently investigated in a field environment. Using 10 bred lines developed by CIAT and its partners for their improved adaptation to drought and phosphorus deficiency, this study characterised the impact of drought on yield and nutrient concentration for leaf and seed tissue of common bean grown in the field. Drought significantly reduced leaf area (by ~50%), harvest index (by ~60%), yield (by ~70%), seed weight (by ~25%) and enriched carbon isotope abundance (δ13C) in the seed. Within the soluble leaf fraction, drought significantly decreased the concentration of mineral nutrients and amino acids, whereas no negative effect on the concentration of nutrients and amino acids was detected within the seed. Genotypic variation in nutrient concentration in both the leaf and seed tissue was identified and should be explored further to identify traits that may confer tolerance to abiotic stress.
Common bean (Phaseolus vulgaris L.) is the most important food legume in the diet of poor people in the tropics. Drought causes severe yield loss in this crop. Identification of traits associated ...with drought resistance contributes to improving the process of generating bean genotypes adapted to these conditions. Field studies were conducted at the International Center for Tropical Agriculture (CIAT), Palmira, Colombia, to determine the relationship between grain yield and different parameters such as effective use of water (EUW), canopy biomass, and dry partitioning indices (pod partitioning index, harvest index, and pod harvest index) in elite lines selected for drought resistance over the past decade. Carbon isotope discrimination (CID) was used for estimation of water use efficiency (WUE). The main objectives were: (i) to identify specific morpho-physiological traits that contribute to improved resistance to drought in lines developed over several cycles of breeding and that could be useful as selection criteria in breeding; and (ii) to identify genotypes with desirable traits that could serve as parents in the corresponding breeding programs. A set of 36 bean genotypes belonging to the Middle American gene pool were evaluated under field conditions with two levels of water supply (irrigated and drought) over two seasons. Eight bean lines (NCB 280, NCB 226, SEN 56, SCR 2, SCR 16, SMC 141, RCB 593, and BFS 67) were identified as resistant to drought stress. Resistance to terminal drought stress was positively associated with EUW combined with increased dry matter partitioned to pod and seed production and negatively associated with days to flowering and days to physiological maturity. Differences in genotypic response were observed between grain CID and grain yield under irrigated and drought stress. Based on phenotypic differences in CID, leaf stomatal conductance, canopy biomass, and grain yield under drought stress, the lines tested were classified into two groups, water savers and water spenders. Pod harvest index could be a useful selection criterion in breeding programs to select for drought resistance in common bean.
Background Plants depend on their root systems to acquire the water and nutrients necessary for their survival in nature, and for their yield and nutritional quality in agriculture. Root systems are ...complex and a variety of root phenes have been identified as contributors to adaptation to soils with low fertility and aluminium (Al) toxicity. Phenotypic characterization of root adaptations to infertile soils is enabling plant breeders to develop improved cultivars that not only yield more, but also contribute to yield stability and nutritional security in the face of climate variability. Scope In this review the adaptive responses of root systems to soils with low fertility and Al toxicity are described. After a brief introduction, the purpose and focus of the review are outlined. This is followed by a description of the adaptive responses of roots to low supply of mineral nutrients with an emphasis on low availability of nitrogen (N) and phosphorus (P) and on toxic levels of Al. We describe progress in developing germplasm adapted to soils with low fertility or Al toxicity using selected examples from ongoing breeding programmes on food (maize, common bean) and forage/feed (Brachiaria spp.) crops. A number of root architectural, morphological, anatomical and metabolic phenes contribute to the superior performance and yield on soils with low fertility and Al toxicity. Major advances have been made in identifying root phenes in improving adaptation to low N (maize), low P (common bean) or high Al maize, common bean, species and hybrids of brachiariagrass, bulbous canarygrass (Phalaris aquatica) and lucerne (Medicago sativa). Conclusions Advanced root phenotyping tools will allow dissection of root responses into specific root phenes that will aid both conventional and molecular breeders to develop superior cultivars. These new cultivars will play a key role in sustainable intensification of crop-livestock systems, particularly in smallholder systems of the tropics. Development of these new cultivars adapted to soils with low fertility and Al toxicity is needed to improve global food and nutritional security and environmental sustainability.
Common bean (
Phaseolus vulgaris
L.) is the most important grain legume for human consumption, and drought stress affects over 60 % of dry bean production worldwide. Field and rainout shelter studies ...were conducted at the International Center for Tropical Agriculture (CIAT), Palmira, Colombia to (i) evaluate phenotypic differences in drought resistance in Andean and Mesoamerican gene pools, (ii) identify genotypes of both Andean and Mesoamerican with superior drought resistance, and (iii) identify phenotypic traits that may be useful for breeding to improve drought resistance in common bean. A total of 24 bean genotypes, twelve genotypes belonging to Mesoamerican gene pool and twelve to Andean gene pool were evaluated under field with two levels of water supply (irrigated and rainfed) and managed drought under rainout shelter conditions. Results showed that five Mesoamerican lines SEA 5, SEA 15, SER 22, SER 16, SER 8 and one Andean line SEQ 1003 have superior resistance to drought. The superior performance of these lines under drought stress was associated with better canopy biomass at mid-pod filling that could be related to deeper root system and effective use of water, combined with efficient remobilization of photosynthates from vegetative structures to pod development (pod partitioning index, PPI) and grain filling (pod harvest index, PHI). Pod harvest index could be a useful selection criteria for drought resistance, to improve the efficiency of breeding programs for selecting superior genotypes of common bean.
Common beans (Phaseolus vulgaris L.) originated in the New World and are the grain legume of greatest production for direct human consumption. Common bean production is subject to frequent droughts ...in highland Mexico, in the Pacific coast of Central America, in northeast Brazil, and in eastern and southern Africa from Ethiopia to South Africa. This article reviews efforts to improve common bean for drought tolerance, referring to genetic diversity for drought response, the physiology of drought tolerance mechanisms, and breeding strategies. Different races of common bean respond differently to drought, with race Durango of highland Mexico being a major source of genes. Sister species of P. vulgaris likewise have unique traits, especially P. acutifolius which is well adapted to dryland conditions. Diverse sources of tolerance may have different mechanisms of plant response, implying the need for different methods of phenotyping to recognize the relevant traits. Practical considerations of field management are discussed including: trial planning; water management; and field preparation.
Key message
AcEXPA1
, an aluminum (Al)-inducible expansin gene, is demonstrated to be involved in carpetgrass (
Axonopus compressus
) root elongation under Al toxicity through analyzing composite ...carpetgrass plants overexpressing
AcEXPA1
.
Aluminum (Al) toxicity is a major mineral toxicity that limits plant productivity in acidic soils by inhibiting root growth. Carpetgrass (
Axonopus compressus
), a dominant warm-season turfgrass widely grown in acidic tropical soils, exhibits superior adaptability to Al toxicity. However, the mechanisms underlying its Al tolerance are largely unclear, and knowledge of the functional genes involved in Al detoxification in this turfgrass is limited. In this study, phenotypic variation in Al tolerance, as indicated by relative root elongation, was observed among seventeen carpetgrass genotypes. Al-responsive genes related to cell wall modification were identified in the roots of the Al-tolerant genotype ‘A58’ via transcriptome analysis. Among them, a gene encoding α-expansin was cloned and designated
AcEXPA1
for functional characterization. Observed Al dose effects and temporal responses revealed that Al induced
AcEXPA1
expression in carpetgrass roots. Subsequently, an efficient and convenient
Agrobacterium rhizogenes
-mediated transformation method was established to generate composite carpetgrass plants with transgenic hairy roots for investigating
AcEXPA1
involvement in carpetgrass root growth under Al toxicity.
AcEXPA1
was successfully overexpressed in the transgenic hairy roots, and
AcEXPA1
overexpression enhanced Al tolerance in composite carpetgrass plants through a decrease in Al-induced root growth inhibition. Taken together, these findings suggest that
AcEXPA1
contributes to Al tolerance in carpetgrass via root growth regulation.
In many low input agricultural systems, phosphorus (P) is one of the most limiting mineral nutrients for plant production. Although applying P fertilizer, if available, is the most performing ...practice, this should be accompanied by other measures. The use of genetically enhanced plants with improved P acquisition efficiency may represent a sustainable solution to increase crop yields in these systems. This review is intended to provide a summary on adaptation mechanisms of crop plants facing P deficiency as the starting point to develop a research approach for improving P acquisition efficiency. P acquisition efficiency in this review refers to external P efficiency. The suggested research approach includes three strategies: molecular assisted plant breeding, deployment of transgenic plants and the use of agricultural practices. The natural source for improving P nutrition of plants is the existing large genetic variation for plant traits that are associated with P acquisition efficiency and will therefore be emphasized in this review.
High nitrogen (N) concentration in bovine urine, which generally exceeds plant N uptake rates, results in the formation of hotspots of N loss when bovine urine is deposited on grazed pasture soils. ...High spatial variability in the distribution of urine patches in grazed pastures poses a major challenge to mitigate N losses. Some exudates from the roots of several tropical forage grasses were shown to inhibit the activity of soil nitrifiers; a process known as biological nitrification inhibition (BNI). We hypothesized that nitrate (NO3−) production and nitrous oxide (N2O) emissions from urine patches deposited on soils under forage grasses with high BNI capacity are lower than those with forage grasses with low BNI capacity. This hypothesis was tested using field plots of two tropical forage grass cultivars, Brachiaria humidicola cv. Tully (BT) and interspecific Brachiaria hybrid cv. Mulato (BM) which, correspondingly, have high and low BNI capacity. Nitrification rates and amoA gene copy numbers of ammonia oxidizing archaea (AOA) and bacteria (AOB) in soils under the two forage grasses were quantified before and after urine and water (control) application, as well, an additional experiment was conducted to quantify denitrification potential. Moreover, soil N2O emissions from simulated urine (0.123 kg N m−2) and water patches were monitored over a 29-day period. Results showed a greater suppression of nitrification, denitrification and AOA abundance in soils under BT than those under BM. Positive relationships (p < 0.05) existed between AOA and AOB abundance and NO3− contents in soils under BM. Bovine urine resulted in higher cumulative N2O fluxes from soils under BM (80 mg N2O-N m−2) compared to those under BT (32 mg N2O-N m−2). Consequently, N2O emission factors were higher for soils under BM (0.07%) than under BT (0.00002%). We conclude that tropical forage grasses with high BNI capacity play a key role in mitigating N2O emissions from bovine urine patches in archaea-dominated soils. This suggests that wide-spread adoption of tropical forage grasses with high BNI capacity may have a great potential to tighten N cycling in grazed pastures.
•Biological nitrification inhibition-BNI suppresses N2O emission from urine patches.•BNI: Brachiaria humidicola cv. Tully (BT) > Brachiaria hybrid cv. Mulato (BM).•Soil N2O emission was lower from urine patches in soils under BT than BM.•Ammonia oxidizing archaeal nitrifiers were particularly suppressed under BT.•High BNI of tropical forage grasses tightens N cycling in archaea-dominated soils.
Phosphorus (P) is one of the essential macronutrients for plant growth and development, and it is an integral part of the major organic components, including nucleic acids, proteins and ...phospholipids. Although total P is abundant in most soils, a large amount of P is not easily absorbed by plants. Inorganic phosphate (Pi) is the plant-available P, which is generally immobile and of low availability in soils. Hence, Pi starvation is a major constraint limiting plant growth and productivity. Enhancing plant P efficiency can be achieved by improving P acquisition efficiency (PAE) through modification of morpho-physiological and biochemical alteration in root traits that enable greater acquisition of external Pi from soils. Major advances have been made to dissect the mechanisms underlying plant adaptation to P deficiency, especially for legumes, which are considered important dietary sources for humans and livestock. This review aims to describe how legume root growth responds to Pi starvation, such as changes in the growth of primary root, lateral roots, root hairs and cluster roots. In particular, it summarizes the various strategies of legumes to confront P deficiency by regulating root traits that contribute towards improving PAE. Within these complex responses, a large number of Pi starvation-induced (PSI) genes and regulators involved in the developmental and biochemical alteration of root traits are highlighted. The involvement of key functional genes and regulators in remodeling root traits provides new opportunities for developing legume varieties with maximum PAE needed for regenerative agriculture.
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