Plastid dynamism integrates development and environment Altamura, Maria Maddalena; Piacentini, Diego; Della Rovere, Federica ...
Plant physiology and biochemistry,
August 2024, 2024-08-00, 20240801, Letnik:
213
Journal Article
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In land plants plastid type differentiation occurs concomitantly with cellular differentiation and the transition from one type to another is under developmental and environmental control. Plastid ...dynamism is based on a bilateral communication between plastids and nucleus through anterograde and retrograde signaling. Signaling occurs through the interaction with specific phytohormones (abscisic acid, strigolactones, jasmonates, gibberellins, brassinosteroids, ethylene, salicylic acid, cytokinin and auxin). The review is focused on the modulation of plastid capabilities at both transcriptional and post-translational levels at the crossroad between development and stress, with a particular attention to the chloroplast, because the most studied plastid type. The role of plastid-encoded and nuclear-encoded proteins for plastid development and stress responses, and the changes of plastid fate through the activity of stromules and plastoglobules, are discussed. Examples of plastid dynamism in response to soil stress agents (salinity, lead, cadmium, arsenic, and chromium) are described. Albinism and root greening are described based on the modulation activities of auxin and cytokinin. The physiological and functional responses of the sensory epidermal and vascular plastids to abiotic and biotic stresses along with their specific roles in stress sensing are described together with their potential modulation of retrograde signaling pathways. Future research perspectives include an in-depth study of sensory plastids to explore their potential for establishing a transgenerational memory to stress. Suggestions about anterograde and retrograde pathways acting at interspecific level and on the lipids of plastoglobules as a novel class of plastid morphogenic agents are provided.
•Plastids are at the crossroad between development and stress.•Plastid organellome gradients explain developmental and environmental transitions.•Plastid signaling affects plant dynamics through phytohormones and stress.•Epidermal and vascular sensory plastids facilitate environment sensing and signaling.
Continental shelves host 90% of modern Organic Carbon (OC) burial and play a key role in the sequestration of terrigenous OC over geological timescales. The efficiency of OC burial in these systems, ...however, varies greatly depending on the duration of exposure to oxic-suboxic conditions during sediment transport. In this study, we use observations across a wide range of stratigraphic and sedimentological scales coupled with geochemistry data from muddy shelf deposits along the western Adriatic to investigate the relation between sediment transport and burial of terrigenous (land-derived) fraction of OC (OCTerr). Our analysis focused on the Little Ice Age (LIA, 1500–1850 CE) interval, which was characterized by wet, cold, and stormy weather conditions, before the time of widespread regulation and damming of rivers. On the Adriatic shelf, LIA deposits are organized as clinothem: strata that dip gently seawards. The LIA clinothem becomes progressively steeper and deeper from north to south. Basin-scale seismic-stratigraphic analysis and biogeochemical data show evidence of elongated stratal units associated with low OCTerr content in the northern sector of the LIA clinothem, whereas farther south, where clinoforms are steeper, the LIA clinothem exhibits wavy stratal units with limited cross-shelf continuity and high OCTerr concentrations. Based on these data we infer two contrasting scenarios for OCTerr deposition during the LIA: 1) protracted sediment redistribution under the influence of coastal currents with efficient OCTerr degradation prior to final burial in the northern sector; and (2) rapid deposition of OCTerr-rich event beds as a result of flood-driven hyperpycnal flows with limited dispersion across the shelf in the southern sector. The latter scenario of deposition resulted in scattered hot spots of OCTerr burial along the apparently homogeneous western Adriatic shelf deposit. Our work documents significant lateral variability of a fine-grained system in which hot spots of OCTerr can be preserved in scattered prodelta bedsets (<1 km in across-shelf lateral continuity) over a 600 km long shelf. Shelfal clinothems worldwide should not be considered as homogeneous pools of OCTerr because of the influence of river, storm, and oceanic currents.
•Novel approach highlights stratal geometries as a diagnostic tool to predict fate and burial of OCTerr.•Shelfal delta-scale clinothems worldwide are not homogeneous pools of OCTerr because of river, storm, and current influence.•Depositional processes govern the sediment transport time and, in turn, OCTerr degradation and burial.•Isolated hot spots of elevated OCTerr resulted from river flood events with magnitudes of present-day 100-year floods.•OCTerr content can be overestimated in C-budget models that do not consider lateral stratigraphic heterogeneity.
The coronavirus disease 2019 (COVID-19) pandemic led to an unprecedented burden on healthcare systems around the world and a severe global socioeconomic crisis, with more than 750 million confirmed ...cases and at least 7 million deaths reported by 31st December 2023. The DEFI-VID19 study (ClinicalTrials.gov NCT04335201), a phase II, single-arm, multicenter, open-label trial was designed in mid-2020 to assess the safety and efficacy of defibrotide in treating patients with COVID-19 pneumonia. Defibrotide was administered at a dose of 25 mg/kg/d intravenously, divided into four daily doses over a planned 14-day period for patients with COVID-19 pneumonia receiving non-invasive ventilation. The primary endpoint was Respiratory Failure Free Survival (RFFS); Overall Survival (OS), the number of post-recovery days, and adverse events were the secondary endpoints. For comparison, a contemporaneous control cohort receiving standard of care only was retrospectively selected by applying the eligibility criteria of the DEFI-VID19 trial. To adjust for the imbalance between the two cohorts in terms of baseline variable distributions, an outcome regression analysis was conducted. In adjusted analysis, patients receiving defibrotide reported a trend towards higher RFFS (HR=0.710.95CI: 0.34 to 1.29, P= .138) and OS (HR=0.780.95CI: 0.33 to 1.53, P= .248) and showed a significantly increased number of post-recovery days (difference in means: 3.61 0.95CI: 0.97 to 6.26, P= .0037). Despite concomitant thromboprophylaxis with low molecular weight heparin, the safety profile of defibrotide proved to be favorable. Taken together, our findings suggest that defibrotide may represent a valuable addition to the COVID-19 therapeutic options.
Abstract
Background
Host inflammation contributes to determine whether SARS-CoV-2 infection causes mild or life-threatening disease. Tools are needed for early risk assessment.
Methods
We studied in ...111 COVID-19 patients prospectively followed at a single reference Hospital fifty-three potential biomarkers including alarmins, cytokines, adipocytokines and growth factors, humoral innate immune and neuroendocrine molecules and regulators of iron metabolism. Biomarkers at hospital admission together with age, degree of hypoxia, neutrophil to lymphocyte ratio (NLR), lactate dehydrogenase (LDH), C-reactive protein (CRP) and creatinine were analysed within a data-driven approach to classify patients with respect to survival and ICU outcomes. Classification and regression tree (CART) models were used to identify prognostic biomarkers.
Results
Among the fifty-three potential biomarkers, the classification tree analysis selected CXCL10 at hospital admission, in combination with NLR and time from onset, as the best predictor of ICU transfer (AUC 95% CI = 0.8374 0.6233–0.8435), while it was selected alone to predict death (AUC 95% CI = 0.7334 0.7547–0.9201). CXCL10 concentration abated in COVID-19 survivors after healing and discharge from the hospital.
Conclusions
CXCL10 results from a data-driven analysis, that accounts for presence of confounding factors, as the most robust predictive biomarker of patient outcome in COVID-19.
Graphic abstract
RationaleIn patients with COVID-19 pneumonia and mild hypoxaemia, the clinical benefit of high-flow nasal oxygen (HFNO) remains unclear. We aimed to examine whether HFNO compared with conventional ...oxygen therapy (COT) could prevent escalation of respiratory support in this patient population.MethodsIn this multicentre, randomised, parallel-group, open-label trial, patients with COVID-19 pneumonia and peripheral oxygen saturation (SpO2) ≤92% who required oxygen therapy were randomised to HFNO or COT. The primary outcome was the rate of escalation of respiratory support (ie, continuous positive airway pressure, non-invasive ventilation or invasive mechanical ventilation) within 28 days. Among secondary outcomes, clinical recovery was defined as the improvement in oxygenation (SpO2 ≥96% with fractional inspired oxygen (FiO2) ≤30% or partial pressure of arterial carbon dioxide/FiO2 ratio >300 mm Hg).ResultsAmong 364 randomised patients, 55 (30.3%) of 181 patients assigned to HFNO and 70 (38.6%) of 181 patients assigned to COT underwent escalation of respiratory support, with no significant difference between groups (absolute risk difference −8.2% (95% CI −18% to +1.4%); RR 0.79 (95% CI 0.59 to 1.05); p=0.09). There was no significant difference in clinical recovery (69.1% vs 60.8%; absolute risk difference 8.2% (95% CI −1.5% to +18.0%), RR 1.14 (95% CI 0.98 to 1.32)), intensive care unit admission (7.7% vs 11.0%, absolute risk difference −3.3% (95% CI −9.3% to +2.6%)), and in hospital length of stay (11 (IQR 8–17) vs 11 (IQR 7–20) days, absolute risk difference −1.0% (95% CI −3.1% to +1.1%)).ConclusionsAmong patients with COVID-19 pneumonia and mild hypoxaemia, the use of HFNO did not significantly reduce the likelihood of escalation of respiratory support.Trial registration number NCT04655638.
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