It has been shown that reactive soil minerals, specifically iron(III) (oxyhydr)oxides, can trap organic carbon in soils overlying intact permafrost, and may limit carbon mobilization and degradation ...as it is observed in other environments. However, the use of iron(III)-bearing minerals as terminal electron acceptors in permafrost environments, and thus their stability and capacity to prevent carbon mobilization during permafrost thaw, is poorly understood. We have followed the dynamic interactions between iron and carbon using a space-for-time approach across a thaw gradient in Abisko (Sweden), where wetlands are expanding rapidly due to permafrost thaw. We show through bulk (selective extractions, EXAFS) and nanoscale analysis (correlative SEM and nanoSIMS) that organic carbon is bound to reactive Fe primarily in the transition between organic and mineral horizons in palsa underlain by intact permafrost (41.8 ± 10.8 mg carbon per g soil, 9.9 to 14.8% of total soil organic carbon). During permafrost thaw, water-logging and O
limitation lead to reducing conditions and an increase in abundance of Fe(III)-reducing bacteria which favor mineral dissolution and drive mobilization of both iron and carbon along the thaw gradient. By providing a terminal electron acceptor, this rusty carbon sink is effectively destroyed along the thaw gradient and cannot prevent carbon release with thaw.
Estimation of the soil organic carbon (SOC) content is of utmost importance in understanding the chemical, physical, and biological functions of the soil. This study proposes machine learning ...algorithms of support vector machines (SVM), artificial neural networks (ANN), regression tree, random forest (RF), extreme gradient boosting (XGBoost), and conventional deep neural network (DNN) for advancing prediction models of SOC. Models are trained with 1879 composite surface soil samples, and 105 auxiliary data as predictors. The genetic algorithm is used as a feature selection approach to identify effective variables. The results indicate that precipitation is the most important predictor driving 14.9% of SOC spatial variability followed by the normalized difference vegetation index (12.5%), day temperature index of moderate resolution imaging spectroradiometer (10.6%), multiresolution valley bottom flatness (8.7%) and land use (8.2%), respectively. Based on 10-fold cross-validation, the DNN model reported as a superior algorithm with the lowest prediction error and uncertainty. In terms of accuracy, DNN yielded a mean absolute error of 0.59%, a root mean squared error of 0.75%, a coefficient of determination of 0.65, and Lin’s concordance correlation coefficient of 0.83. The SOC content was the highest in udic soil moisture regime class with mean values of 3.71%, followed by the aquic (2.45%) and xeric (2.10%) classes, respectively. Soils in dense forestlands had the highest SOC contents, whereas soils of younger geological age and alluvial fans had lower SOC. The proposed DNN (hidden layers = 7, and size = 50) is a promising algorithm for handling large numbers of auxiliary data at a province-scale, and due to its flexible structure and the ability to extract more information from the auxiliary data surrounding the sampled observations, it had high accuracy for the prediction of the SOC base-line map and minimal uncertainty.
Nitrous oxide (N2O) contributes 8% to global greenhouse gas emissions. Agricultural sources represent about 60% of anthropogenic N2O emissions. Most agricultural N2O emissions are due to increased ...fertilizer application. A considerable fraction of nitrogen fertilizers are converted to N2O by microbiological processes (that is, nitrification and denitrification). Soil amended with biochar (charcoal created by pyrolysis of biomass) has been demonstrated to increase crop yield, improve soil quality and affect greenhouse gas emissions, for example, reduce N2O emissions. Despite several studies on variations in the general microbial community structure due to soil biochar amendment, hitherto the specific role of the nitrogen cycling microbial community in mitigating soil N2O emissions has not been subject of systematic investigation. We performed a microcosm study with a water-saturated soil amended with different amounts (0%, 2% and 10% (w/w)) of high-temperature biochar. By quantifying the abundance and activity of functional marker genes of microbial nitrogen fixation (nifH), nitrification (amoA) and denitrification (nirK, nirS and nosZ) using quantitative PCR we found that biochar addition enhanced microbial nitrous oxide reduction and increased the abundance of microorganisms capable of N2-fixation. Soil biochar amendment increased the relative gene and transcript copy numbers of the nosZ-encoded bacterial N2O reductase, suggesting a mechanistic link to the observed reduction in N2O emissions. Our findings contribute to a better understanding of the impact of biochar on the nitrogen cycling microbial community and the consequences of soil biochar amendment for microbial nitrogen transformation processes and N2O emissions from soil.
Forest ecosystems are an integral component of the global carbon cycle as they take up and release large amounts of C over short time periods (C flux) or accumulate it over longer time periods (C ...stock). However, there remains uncertainty about whether and in which direction C fluxes and in particular C stocks may differ between forests of high versus low species richness. Based on a comprehensive dataset derived from field-based measurements, we tested the effect of species richness (3-20 tree species) and stand age (22-116 years) on six compartments of above- and below-ground C stocks and four components of C fluxes in subtropical forests in southeast China. Across forest stands, total C stock was 149 ± 12 Mg ha
with richness explaining 28.5% and age explaining 29.4% of variation in this measure. Species-rich stands had higher C stocks and fluxes than stands with low richness; and, in addition, old stands had higher C stocks than young ones. Overall, for each additional tree species, the total C stock increased by 6.4%. Our results provide comprehensive evidence for diversity-mediated above- and below-ground C sequestration in species-rich subtropical forests in southeast China. Therefore, afforestation policies in this region and elsewhere should consider a change from the current focus on monocultures to multi-species plantations to increase C fixation and thus slow increasing atmospheric CO
concentrations and global warming.
Biodiversity experiments have shown that species loss reduces ecosystem functioning in grassland. To test whether this result can be extrapolated to forests, the main contributors to terrestrial ...primary productivity, requires large-scale experiments. We manipulated tree species richness by planting more than 150,000 trees in plots with 1 to 16 species. Simulating multiple extinction scenarios, we found that richness strongly increased stand-level productivity. After 8 years, 16-species mixtures had accumulated over twice the amount of carbon found in average monocultures and similar amounts as those of two commercial monocultures. Species richness effects were strongly associated with functional and phylogenetic diversity. A shrub addition treatment reduced tree productivity, but this reduction was smaller at high shrub species richness. Our results encourage multispecies afforestation strategies to restore biodiversity and mitigate climate change.
Land suitability assessment is essential for increasing production and planning a sustainable agricultural system, but such information is commonly scarce in the semi-arid regions of Iran. Therefore, ...our aim is to assess land suitability for two main crops (i.e., rain-fed wheat and barley) based on the Food and Agriculture Organization (FAO) “land suitability assessment framework” for 65 km2 of agricultural land in Kurdistan province, Iran. Soil samples were collected from genetic layers of 100 soil profiles and the physical-chemical properties of the soil samples were analyzed. Topography and climate data were also recorded. After calculating the land suitability classes for the two crops, they were mapped using machine learning (ML) and traditional approaches. The maps predicted by the two approaches revealed notable differences. For example, in the case of rain-fed wheat, results showed the higher accuracy of ML-based land suitability maps compared to the maps obtained by traditional approach. Furthermore, the findings indicated that the areas with classes of N2 (≈18%↑) and S3 (≈28%↑) were higher and area with the class N1 (≈24%↓) was less predicted in the traditional approach compared to the ML-based approach. The major limitations of the study area were rainfall at the flowering stage, severe slopes, shallow soil depth, high pH, and large gravel content. Therefore, to increase production and create a sustainable agricultural system, land improvement operations are suggested.
Human-induced biodiversity change impairs ecosystem functions crucial to human well-being. However, the consequences of this change for ecosystem multifunctionality are poorly understood beyond ...effects of plant species loss, particularly in regions with high biodiversity across trophic levels. Here we adopt a multitrophic perspective to analyze how biodiversity affects multifunctionality in biodiverse subtropical forests. We consider 22 independent measurements of nine ecosystem functions central to energy and nutrient flow across trophic levels. We find that individual functions and multifunctionality are more strongly affected by the diversity of heterotrophs promoting decomposition and nutrient cycling, and by plant functional-trait diversity and composition, than by tree species richness. Moreover, cascading effects of higher trophic-level diversity on functions originating from lower trophic-level processes highlight that multitrophic biodiversity is key to understanding drivers of multifunctionality. A broader perspective on biodiversity-multifunctionality relationships is crucial for sustainable ecosystem management in light of non-random species loss and intensified biotic disturbances under future environmental change.
Soil texture and particle size fractions (PSFs) are a critical characteristic of soil that influences most physical, chemical, and biological properties of soil; furthermore, reliable spatial ...predictions of PSFs are crucial for agro-ecological modeling. Here, series of hybridized artificial neural network (ANN) models with bio-inspired metaheuristic optimization algorithms such as a genetic algorithm (GA-ANN), particle swarm optimization (PSO-ANN), bat (BAT-ANN), and monarch butterfly optimization (MBO-ANN) algorithms, were built for predicting PSFs for the Mazandaran Province of northern Iran. In total, 1595 composite surficial soil samples were collected, and 64 environmental covariates derived from terrain, climatic, remotely sensed, and categorical datasets were used as predictors. Models were tested using a repeated 10-fold nested cross-validation approach. The results indicate that the hybridized ANN methods were far superior to the reference approach using ANN with a backpropagation training algorithm (BP-ANN). Furthermore, the MBO-ANN approach was consistently determined to be the best approach and yielded the lowest error and uncertainty. The MBO-ANN model improved the predictions in terms of RMSE by 20% for clay, 10% for silt, and 24% for sand when compared to BP-ANN. The physiographical units, soil types, geology maps, rainfall, and temperature were the most important predictors of PSFs, followed by the terrain and remotely sensed data. This study demonstrates the effectiveness of bio-inspired algorithms for improving ANN models. The outputs of this study will support and inform sustainable soil management practices, agro-ecological modeling, and hydrological modeling for the Mazandaran Province of Iran.
Understanding the spatial distribution of soil organic carbon (SOC) content over different climatic regions will enhance our knowledge of carbon gains and losses due to climatic change. However, ...little is known about the SOC content in the contrasting arid and sub-humid regions of Iran, whose complex SOC–landscape relationships pose a challenge to spatial analysis. Machine learning (ML) models with a digital soil mapping framework can solve such complex relationships. Current research focusses on ensemble ML models to increase the accuracy of prediction. The usual ensemble method is boosting or weighted averaging. This study proposes a novel ensemble technique: the stacking of multiple ML models through a meta-learning model. In addition, we tested the ensemble through rescanning the covariate space to maximize the prediction accuracy. We first applied six state-of-the-art ML models (i.e., Cubist, random forests (RF), extreme gradient boosting (XGBoost), classical artificial neural network models (ANN), neural network ensemble based on model averaging (AvNNet), and deep learning neural networks (DNN)) to predict and map the spatial distribution of SOC content at six soil depth intervals for both regions. In addition, the stacking of multiple ML models through a meta-learning model with/without rescanning the covariate space were tested and applied to maximize the prediction accuracy. Out of six ML models, the DNN resulted in the best modeling accuracies, followed by RF, XGBoost, AvNNet, ANN, and Cubist. Importantly, the stacking of models indicated a significant improvement in the prediction of SOC content, especially when combined with rescanning the covariate space. For instance, the RMSE values for SOC content prediction of the upper 0–5 cm of the soil profiles of the arid site and the sub-humid site by the proposed stacking approaches were 17% and 9% respectively, less than that obtained by the DNN models—the best individual model. This indicates that rescanning the original covariate space by a meta-learning model can extract more information and improve the SOC content prediction accuracy. Overall, our results suggest that the stacking of diverse sets of models could be used to more accurately estimate the spatial distribution of SOC content in different climatic regions.
Frequent water table measurements are crucial for sustainable groundwater management in arid regions. Such monitoring is more important in areas that are already facing an acute problem with ...excessive groundwater withdrawal. In the majority of these locations, continuous readings of groundwater levels are lacking. Therefore, an approximate estimate of the rate of increase or decrease in water consumption over time may serve as a proxy for the missing data. This could be achieved by tracking the changes in vegetated areas that generally correlate with changes in the rate of water use. The technique proposed in this paper is based on two remote sensing datasets: Landsat 7 and 8 from 2001 to 2021, and Sentinel 2A from 2015 to 2021, as well as five vegetation indices: Normalized Difference Vegetation Index (NDVI), Renormalized Difference Vegetation Index (RDVI), Soil Adjusted Vegetation Index (SAVI), Enhanced Vegetation Index (EVI), and Transformed Vegetation Index (TVI). The findings have shown that the datasets chosen performed best for small-scale land farms at the research location, which was chosen to be the El-Qaa plain, in the southwestern corner of the Sinai Peninsula in Egypt. Landsat 7 data with a resolution of 30 m revealed a substantial increase in land farms from 2.9 km2 in 2001 to 23.3 km2 in 2021. By using the five indices based on Sentinel 2A data, vegetated areas were categorized as heavy, moderate, or light. In addition, the expansion of each class area from 2015 to 2021 was tracked. Additionally, the NDVI index was modified to better reflect the arid environment (subsequently naming this new index as the Arid Vegetation Index: AVI). Rough scenarios of the increase in water consumption rate at the research site were generated by observing the increase in vegetated areas and collecting rough information from the farmers regarding the crop types.
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