Four pilot-scale conductive dryers, namely a vacuum drum dryer (VDD), a drum dryer (DD), an agitated thin film dryer (ATFD) and a refractance window dryer (RWD), were used to dry tomato puree. Drying induced colour differences between the reconstituted puree and the original puree and strongly affected the volatile and non-volatile profiles of the powders. Principal component analysis (PCA) identified four separated groups corresponding to the different drying methods, indicating that the drying methods caused significant variance in compound profiles. Subsequently, pairwise comparison of different dried powders was performed by partial least square discriminant analysis (PLS-DA). This resulted in a selection of discriminative volatile and non-volatile markers. RWD and VDD produced powders with high volatile markers that may be related to aroma retention. Conversely, DD dried products contained more non-volatile markers that can be related to taste perception. ATFD processed powders had a lower level of discriminant compounds. Tomato products are frequently thermally processed and dehydrated. However, processing negatively affects the sensory quality of tomato products. In this study, four conductive drying processes, i.e. vacuum drum drying (VDD), drum drying (DD), agitated thin film drying (ATFD) and refractance window drying (RWD) were studied for being energy-efficient drying methods, while suitable for mild (e.g. due to the reduced pressure) drying of pastes and slurries, such as tomato puree. The pilot-scale drying experiments and subsequent statistical analyses of results on quality markers contributed to unravel the impact of the different conductive drying technologies on tomato powder quality. This study may be considered a starting point for selection of conductive drying technologies for the efficient production of high quality tomato powders and other vegetable powders. •Statistical comparison revealed variance in quality of conductively dried tomato purees.•Conductive drying technologies induced colour changes of reconstituted tomato purees.•Technologies showed distinct variance in (non-)volatile profiles.•Refractance window drying and vacuum drum drying led to more volatile retention.•Tomato powders dried by drum drying contained more non-volatiles markers.