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  • Nanobody-enabled monitoring...
    Che, Tao; English, Justin; Krumm, Brian E; Kim, Kuglae; Pardon, Els; Olsen, Reid H J; Wang, Sheng; Zhang, Shicheng; Diberto, Jeffrey F; Sciaky, Noah; Carroll, F Ivy; Steyaert, Jan; Wacker, Daniel; Roth, Bryan L

    Nature communications, 03/2020, Letnik: 11, Številka: 1
    Journal Article

    Recent studies show that GPCRs rapidly interconvert between multiple states although our ability to interrogate, monitor and visualize them is limited by a relative lack of suitable tools. We previously reported two nanobodies (Nb39 and Nb6) that stabilize distinct ligand- and efficacy-delimited conformations of the kappa opioid receptor. Here, we demonstrate via X-ray crystallography a nanobody-targeted allosteric binding site by which Nb6 stabilizes a ligand-dependent inactive state. As Nb39 stabilizes an active-like state, we show how these two state-dependent nanobodies can provide real-time reporting of ligand stabilized states in cells in situ. Significantly, we demonstrate that chimeric GPCRs can be created with engineered nanobody binding sites to report ligand-stabilized states. Our results provide both insights regarding potential mechanisms for allosterically modulating KOR with nanobodies and a tool for reporting the real-time, in situ dynamic range of GPCR activity.