A six-gene phylogeny of the Inocybaceae is presented to address classification of major clades within the family. Seven genera are recognized that establish a global overview of phylogenetic ...relationships in the Inocybaceae. Two genera-Nothocybe and Pseudosperma-are described as new. Two subgenera of Inocybe-subg. Inosperma and subg. Mallocybe-are elevated to generic rank. These four new genera, together with the previously described Auritella, Tubariomyces, and now Inocybe sensu stricto, constitute the Inocybaceae, an ectomycorrhizal lineage of Agaricales that associates with at least 23 plant families worldwide. Pseudosperma, Nothocybe, and Inocybe are recovered as a strongly supported inclusive clade within the family. The genus Nothocybe, represented by a single species from tropical India, is strongly supported as the sister lineage to Inocybe, a hyperdiverse genus containing hundreds of species and global distribution. Two additional inclusive clades, including Inosperma, Tubariomyces, Auritella, and Mallocybe, and a nested grouping of Auritella, Mallocybe, and Tubariomyces, are recovered but with marginal statistical support. Overall, the six-gene data set provides a more robust phylogenetic estimate of relationships within the family than do single-gene and single-gene-region estimates. In addition, Africa, India, and Australia are characterized by the most genera in the family, with South America containing the fewest number of genera. A total of 180 names are recombined or proposed as new in Inosperma, Mallocybe, and Pseudosperma. A key to genera of Inocybaceae is provided.
Species in the Inocybe praetervisa group are characterized by producing nodulose to angular basidiospores and a bulbous, marginate, white stipe devoid of any pinkish to reddish tinge. Species ...delimitation problems and common misinterpretations in the I. praetervisa group have not yet been resolved through type studies and analysis of molecular data. This study seeks to clarify the taxonomy and nomenclature of species around I. praetervisa. Analyses of the nuc rDNA internal transcribed regions (ITS) recovered two major groups within the I. praetervisa group that can be separated on the basis of cystidial morphology. The study of three authentic and topotypic specimens in the Bresadola herbarium revealed that the name I. praetervisa has been misapplied often. The ITS region of one of the specimens was obtained, and this specimen is designated as epitype in support of a lectotype. Inocybe rivularis is demonstrated to be a later synonym of I. praetervisa, while Inocybe phaeocystidiosa is the correct name for the species most often misdetermined as I. praetervisa. Inocybe salicis-herbaceae and I. praetervisa var. flavofulvida are shown to be synonyms of I. phaeocystidiosa based on ITS sequence data from type collections. A new species sister to I. phaeocystidiosa with a Mediterranean distribution is described as I. praetervisoides. Cystidial morphology, distribution of caulocystidia, basidiospore morphology and ecology are shown to be the main diagnostic characters for separating the species. Inocybe praetervisa and I. phaeocystidiosa have a transoceanic distribution in Europe and North America, whereas I. praetervisoides so far is known only from the Mediterranean region.
The taxonomic position of Inocybe inexpectata is reconsidered on the basis of new molecular and morphological data from four published records. Up to three species can be recognized to which the name ...I. inexpectata has been applied. In addition to distinct morphological features present in this lineage it is proposed here as the new genus Tubariomyces. A complete taxonomical description of the genus and the species Tubariomyces inexpectatus and T. hygrophoroides sp. nov. also is provided.
Cyphelloid fungi represent a polyphyletic assemblage of reduced agarics, including the brown-spored family Chromocyphellaceae. In order to elucidate the phylogenetic position of Chromocyphellaceae, ...newly generated sequences of Chromocyphella were included in a multigene alignment of the Agaricineae and phylogenetically analyzed. The current analyses show that the Chromocyphella muscicola specimen used to phylogenetically place Chromocyphellaceae in its original description was misidentified and that the Chromocyphellaceae nests in the Hymenogastraceae, Chromocyphella being sister to Flammula. Chromocyphella is emended, including now a new species with lamellate and stipitate basidiomata, C. lamellata. The name Cymbella crouanii, type species of Chromocyphella, is lecto- and epitypified. Our analyses support a new origin of cyphelloid fungi. The shift to a cyphelloid basidioma from an agaric ancestor is suggested to have occurred in two evolutionary steps in Chromocyphella, an initial reduction in basidioma size and a subsequent loss of lamellae and stipe.
The taxonomy of
and closely allied species is addressed using morphological and molecular data (nrITS and nrLSU DNA). The holotypes of
and
and the isotype of
were studied and sequenced. Our results ...suggest the synonymy between
and
as well as that between
and
.
The aim of this study is to carry out a taxonomic revision of the groups Calamistratum and Geraniodorum of the genus Inosperma sect. Inosperma in Europe. For this purpose, a multigenic phylogenetic ...analysis was carried out using the ITS, LSU, RPB1 and RPB2 markers, covering a total of 111 sequences, including those generated from the existing type-material collections. This analysis led to the recognition of nine clades or terminal groups for the European continent, correlating with nine morphological species. Three of them, I. calamistratum, I. neohirsutum sp. nov. and I. turietoense sp. nov., are distributed in humid and temperate forests, whereas I. geminum sp. nov., I. geraniodorum, I. gracilentum sp. nov., I. praetermissum comb. nov., I. subhirsutum and I. veliferum seem to be restricted to the colder altimontane, boreal and alpine climates. It is concluded that the study of morphological and ecological characteristics allows the recognition of species without the need for an often-subjective interpretation of organoleptic characteristics. Inocybe hirsuta is considered a synonym of Inosperma calamistratum, Inosperma praetermissum as a different species from I. calamistratum, and Inocybe geraniodora var. gracilenta f. salicis-herbaceae as a synonym of I. praetermissum. Four new species and one new combination are proposed. A key for the recognition of the European species is provided. Illustrations and photographs of macro- and micromorphological characters and SEM spores of all species are presented.
The new species Inocybe flavobrunnescens is described on the basis of morphological and genetic features. It is characterized by (sub)isodiametric spores; it has a variable number of low and obtuse ...knobs, lageniform cystidia, and habitat preference for thermophilous oak woods on calcareous soils. It is compared with type material of Inocybe xanthomelas and I. krieglsteineri, which share with the new species a darkening flesh and small to medium sized basidiomes. ITS analysis revealed a low intraspecific variability within each Inocybe lineage, suggesting their accommodation as independent species. On the basis of this DNA region, I. xanthomelas and I. krieglsteineri are closely related. The present work suggests also updating several names in public databases to accommodate the present taxonomic conclusions. A lectotype for I. xanthomelas is designated.
Species of Cantharellus contain carotenoid pigments, which produce yellow, orange and red colours. As microscopic characters are of limited value to separate species, colour has always been an ...important taxonomic character for species delimitation in Cantharellus. Entirely white Cantharellus or specimens lacking yellow pigments are occasionally reported from Europe, but it is unclear whether these represent independent species or are simply unusual colour variants of otherwise yellow species. The main objective of this study is to assess the taxonomic identity of such white and orange specimens using molecular data. In the context of an ongoing 4-gene phylogeny of European Cantharellus, an ITS2-LSU dataset representing all the European taxa was assembled, including 9 white and 3 orange specimens. Bayesian analyses revealed that white specimens may occasionally occur in C. amethysteus, C. cibarius, C. ferruginascens, C. pallens and C. romagnesianus, whereas orange specimens are found in C. cibarius and C. pallens. We therefore associate white specimens with an albinism phenomenon due to a possible absence of carotenoids. Accordingly, the names C. cibarius var. inodorus and C. cibarius f. pallidus are neotypified and synonymized with C. cibarius, while C. gallaecicus is considered a synonym of C. romagnesianus based on sequences from a paratype specimen of the former. Likewise, the name Cantharellus cibarius var. salmoneus is neotypified and falls in synonymy with C. cibarius.
•White-rot wood and humus basidiomycetes decolorizing recalcitrant dyes on MEA plates.•We describe two dye decolorization patterns correlated with different fungal groups.•Dye decolorization patterns ...are correlated with oxidoreductases secretion patterns.•Two fungal colonization strategies for wood and leaf litter degradation in the field.
During several forays for ligninolytic fungi in different Spanish native forests, 35 white-rot basidiomycetes growing on dead wood (16 species from 12 genera) and leaf litter (19 species from 10 genera) were selected for their ability to decolorize two recalcitrant aromatic dyes (Reactive Blue 38 and Reactive Black 5) added to malt extract agar medium. In this study, two dye decolorization patterns were observed and correlated with two ecophysiological groups (wood and humus white-rot basidiomycetes) and three taxonomical groups (orders Polyporales, Hymenochaetales and Agaricales). Depending on the above groups, different decolorization zones were observed on the dye-containing plates, being restricted to the colony area or extending to the surrounding medium, which suggested two different decay strategies. These two strategies were related to the ability to secrete peroxidases and laccases inside (white-rot wood Polyporales, Hymenochaetales and Agaricales) and outside (white-rot humus Agaricales) of the fungal colony, as revealed by enzymatic tests performed directly on the agar plates. Similar oxidoreductases production patterns were observed when fungi were grown in the absence of dyes, although the set of enzyme released was different. All these results suggest that the decolorization patterns observed could be related with the existence of two decay strategies developed by white-rot basidiomycetes adapted to wood and leaf litter decay in the field.
Diverse collections of Cortinarius pseudofallax from several European countries were studied using morphological characters and ITS1-5.8S-ITS2 genes from sequence data. They were compared with some ...close species such as C. cedriolens, C. neofallax and C. parvannulatus. All these taxa share some features like a light brown pileus, a stipe provided with a more or less developed whitish veil, small and well-ornamented spores and, above all, a typical strong and perfumed acidulous smell; in addition. the phylogenetic tree built with the ITS gene sequences of these vouchers showed that they clustered in a well-supported clade, here treated as section Parvuli. Our specimens of C. pseudofallax are morphologically described and illustrated with pictures of fresh specimens and basidiospores seen under SEM. A discussion of their taxonomic relationships with another group of similar species belonging to the C. decipiens sensu lato complex is presented.
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