This paper reviews the work carried out in the ACTS KEOPS (Keys to Optical Packet Switching) project, describing the results obtained to date. The main objective of the project is the definition, ...development, and assessment of optical packet switching and routing networks, capable of providing transparency to the payload bit rate, using optical packets of fixed duration and low bit rate headers in order to enable easier processing at the network/node interfaces. The feasibility of the KEOPS concept is assessed by modeling, laboratory experiments, and testbed implementation of optical packet switching nodes and network/node interfacing blocks, including a fully equipped demonstrator. The demonstration relies on advanced optoelectronic components, developed within the project, which are described.
Background: Cdc42, a GTP-binding protein of the Rho family, controls actin cytoskeletal organization and helps to generate actin-based protruding structures, such as filopodia. In vitro, Cdc42 ...regulates actin polymerization by facilitating the creation of free barbed ends – the more rapidly growing ends of actin filaments – and subsequent elongation at these ends. The Wiskott– Aldrich syndrome protein, WASP, which has a pleckstrin-homology domain and a Cdc42/Rac-binding motif, has been implicated in cell signaling and cytoskeleton reorganization. We have investigated the consequences of local recruitment of activated Cdc42 or WASP to the plasma membrane.
Results: We used an activated Cdc42 protein that could be recruited to an engineered membrane receptor by adding rapamycin as a bridge, and added antibody-coupled beads to aggregate these receptors. Inducible recruitment of Cdc42 to clusters of receptors stimulated actin polymerization, resulting in the formation of membrane protrusions. Cdc42-induced protrusions were enriched in the vasodilator-stimulated phosphoprotein VASP and the focal-adhesion-associated proteins zyxin and ezrin. The Cdc42 effector WASP could also induce the formation of protrusions, albeit of different morphology.
Conclusions: This is the first demonstration that the local recruitment of activated Cdc42 or its downstream effector, WASP, to a membrane receptor in whole cells is sufficient to trigger actin polymerization that results in the formation of membrane protrusions. Our data suggest that Cdc42-induced actin-based protrusions result from the local and serial recruitment of cytoskeletal proteins including zyxin, VASP, and ezrin.
We studied the prevalence and species distribution of nontuberculous mycobacteria (NTM) in relation to age in 385 patients with cystic fibrosis (CF) (mean age ± standard deviation range, 12.0 ± 6.1 1 ...to 24 years; sex ratio, 0.53) attending three Parisian centers. The overall prevalence of NTM in sputum was 8.1% (31 out of 385). The following NTM were isolated (n = 33): Mycobacterium abscessus (n = 13, 39.4%), Mycobacterium avium complex (MAC) (n = 7, 21.2%), Mycobacterium gordonae (n = 6, 18.2%), and other (n = 7, 21.2%). Sixteen patients met the American Thoracic Society microbiological criteria for NTM infection, including 11 patients positive for M. abscessus, 4 for MAC, and 1 for MAC and Mycobacterium kansasii. The overall prevalence of NTM was significantly lower in patients under 15 years old than for patients equal to or more than 15 years old (4.8 versus 14.9%, respectively; P = 0.001). M. abscessus was isolated at all ages, while MAC was not recovered before 15 years (prevalence of 0.0 and 5.2% in patients aged 1 to 14 and 15 to 24, respectively; P = 0.001).
This correspondence considers the use of punctured quasi-arithmetic (QA) codes for the Slepian-Wolf problem. These entropy codes are defined by finite state machines for memoryless and first-order ...memory sources. Puncturing an entropy coded bit-stream leads to an ambiguity at the decoder side. The decoder makes use of a correlated version of the original message in order to remove this ambiguity. A complete distributed source coding (DSC) scheme based on QA encoding with side information at the decoder is presented, together with iterative structures based on QA codes. The proposed schemes are adapted to memoryless and first-order memory sources. Simulation results reveal that the proposed schemes are efficient in terms of decoding performance for short sequences compared to well-known DSC solutions using channel codes.
•First study on functional specialization of fine roots of young E. grandis trees.•Fine roots show contrasting potential nutrient uptake rates with soil depth.•Fertilization increased uptake rate of ...Rb+ and Sr2+ by unit of root length in depth.•Fine root functional specialization occurs throughout the development of E. grandis trees.
Functional specialization of fine roots was found for Eucalyptus grandis trees at harvesting age (6 years) on tropical soils. Aiming to elucidate whether functional specialization is a ubiquitous feature of eucalypts, we focused on its changes with ontogeny, tree nutrient status and soil depth. We studied the potential uptake of N, K and Ca by 2-year-old E. grandis trees, as a function of soil depth and NPK fertilization. We injected NO−3-15N, Rb+ (K+ analogue) and Sr2+ (Ca2+ analogue) tracers simultaneously in a solution at depths of 10, 50, 150 and 300 cm in a sandy Ferralsol soil. A complete randomized block design was set up with three replicates of paired trees per injection depth, in fertilized and non-fertilized plots. Recently expanded leaves were sampled at 70 days after tracer injection. Determination of foliar Rb, Sr concentrations and x(15N) allowed estimating the relative uptake potential (RUP) and the specific RUP (SRUP), defined as the ratio between RUP and fine root length density (RLD) in the corresponding soil layer. Various root traits were measured at each depth. Foliar N and K concentrations were higher in fertilized than in non-fertilized trees. The RUP of NO3–-15N decreased sharply with soil depth and the highest values of the SRUP of NO3–-15N were found at a depth of 50 cm. The RUP of Rb+ and Sr2+ did not change with soil depth, whilst the SRUP of Rb+ and Sr2+ were higher at the depth of 300 cm than in the topsoil, concomitant with an increase in root diameter and a decrease in root tissue density with depth. The SRUP of Rb+ and Sr2+ at a depth of 300 cm were on average 136 and 61% higher for fertilized trees than for non-fertilized trees, respectively. Fine roots of young E. grandis trees showed contrasting potential uptake rates with soil depth depending on the nutrient. Fertilization increased the uptake rate of Rb+ and Sr2+ by unit of root length in deep soil layers. Functional specialization of fine roots for cations of low mobility depending on depth previously shown at harvesting age also occurs in young E. grandis plantations and increases with fertilization application. This mechanism helps explaining very low amounts of cations lost by leaching in Eucalyptus plantations established in deep tropical soils, even in highly fertilized stands.
Many genes important in immunity are found as multigene families. The butyrophilin genes are members of the B7 family, playing diverse roles in co-regulation and perhaps in antigen presentation. In ...humans, a fixed number of butyrophilin genes are found in and around the major histocompatibility complex (MHC), and show striking association with particular autoimmune diseases. In chickens, BG genes encode homologues with somewhat different domain organisation. Only a few BG genes have been characterised, one involved in actin-myosin interaction in the intestinal brush border, and another implicated in resistance to viral diseases. We characterise all BG genes in B12 chickens, finding a multigene family organised as tandem repeats in the BG region outside the MHC, a single gene in the MHC (the BF-BL region), and another single gene on a different chromosome. There is a precise cell and tissue expression for each gene, but overall there are two kinds, those expressed by haemopoietic cells and those expressed in tissues (presumably non-haemopoietic cells), correlating with two different kinds of promoters and 5' untranslated regions (5'UTR). However, the multigene family in the BG region contains many hybrid genes, suggesting recombination and/or deletion as major evolutionary forces. We identify BG genes in the chicken whole genome shotgun sequence, as well as by comparison to other haplotypes by fibre fluorescence in situ hybridisation, confirming dynamic expansion and contraction within the BG region. Thus, the BG genes in chickens are undergoing much more rapid evolution compared to their homologues in mammals, for reasons yet to be understood.
...the diagnosis is confirmed using advanced molecular techniques (Next-generation sequencing or DNA-methylation profiling) 3. ...10/24 cases were confirmed as NB-FOXR2. ...the diagnosis of NB-FOXR2 ...may be ameliorated by using an algorithmic approach that includes several criteria based on histopathology, IHC and FISH analysis.
The Central Nervous System (CNS) tumor with BCOR internal tandem duplication (ITD) has recently been added as a novel embryonal histomolecular tumor type to the 2021 World Health Organization (WHO) ...Classification of CNS Tumors. In addition, other CNS tumors harboring a BCOR/BCORL1 fusion, which are defined by a distinct DNA-methylation profile, have been recently identified in the literature but clinical, radiological and histopathological data remain scarce. Herein, we present two adult cases of CNS tumors with EP300::BCOR fusion. These two cases presented radiological, histopathological, and immunohistochemical homologies with CNS tumors having BCOR ITD in children. To compare these tumors with different BCOR alterations, we performed a literature review with a meta-analysis. CNS tumors with EP300::BCOR fusion seem to be distinct from their BCOR ITD counterparts in terms of age, location, progression-free survival, tumor growth pattern, and immunopositivity for the BCOR protein. CNS tumors from the EP300::BCOR fusion methylation class in adults may be added to the future WHO classification.
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