Phenotypic differences among populations within a species have been reported for a variety of traits, ranging from life history to physiology to gene transcription. Population‐level phenotypic ...variation has been attributed to genetic differences resulting from genetic drift and/or local adaptation as well as environmental differences resulting from plasticity. We studied population‐ and family‐level variation in gene transcription for 22 fitness‐related genes, comprising immune, growth, metabolic, and stress processes in Chinook salmon (Oncorhynchus tshawytscha). We created hybrid Chinook salmon families from eight populations and treated them with an immune stimulus, a handling stress challenge, and held some as a no‐treatment control group. Population effects, sire effects, and narrow‐sense heritability (h2) were calculated for each candidate gene within each treatment group. We expected population to have a significant effect on gene transcription for many of our genes; however, we found a population effect for transcription at only one immune gene at rest. The limited number of significant population effects on gene transcription, combined with significant additive genetic variance within each population does not support the expectation of past strong selection pressures acting on heritable transcription profiles among populations. Instead, our results indicate that Chinook salmon likely adapt to their local environment through transcriptional plasticity rather than fixed differences. The expectation for fixed population‐level differences in gene transcription at fitness‐related genes, reflecting accepted models of local adaptation is high; however, comparisons among multiple populations using half‐sibling breeding designs are rare. Our work fills an important gap in our growing understanding of the process of among and within‐population divergence.
Reliable monitoring of the invasive Halyomorpha halys abundance, phenology and geographic distribution is critical for its management. Halyomorpha halys adult and nymphal captures on clear sticky ...traps and in black pyramid traps were compared in 18 states across the Great Lakes, Mid-Atlantic, Southeast, Pacific Northwest and Western regions of the United States. Traps were baited with commercial lures containing the H. halys pheromone and synergist, and deployed at field sites bordering agricultural or urban locations with H. halys host plants. Nymphal and adult captures in pyramid traps were greater than those on sticky traps, but captures were positively correlated between the two trap types within each region and during the early-, mid- and late season across all sites. Sites were further classified as having a low, moderate or high relative H. halys density and again showed positive correlations between captures for the two trap types for nymphs and adults. Among regions, the greatest adult captures were recorded in the Southeast and Mid-Atlantic on pyramid and sticky traps, respectively, with lowest captures recorded in the West. Nymphal captures, while lower than adult captures, were greatest in the Southeast and lowest in the West. Nymphal and adult captures were, generally, greatest during July–August and September–October, respectively. Trapping data were compared with available phenological models showing comparable population peaks at most locations. Results demonstrated that sticky traps offer a simpler alternative to pyramid traps, but both can be reliable tools to monitor H. halys in different geographical locations with varying population densities throughout the season.
Zika virus infection during pregnancy can cause serious birth defects of the brain and eyes, including intracranial calcifications, cerebral or cortical atrophy, chorioretinal abnormalities, and ...optic nerve abnormalities (1,2). The frequency of these Zika-associated brain and eye defects, based on data from the U.S. Zika Pregnancy and Infant Registry (USZPIR), has been previously reported in aggregate (3,4). This report describes the frequency of individual Zika-associated brain and eye defects among infants from pregnancies with laboratory evidence of confirmed or possible Zika virus infection. Among 6,799 live-born infants in USZPIR born during December 1, 2015-March 31, 2018, 4.6% had any Zika-associated birth defect; in a subgroup of pregnancies with a positive nucleic acid amplification test (NAAT) for Zika virus infection, the percentage was 6.1% of live-born infants. The brain and eye defects most frequently reported included microcephaly, corpus callosum abnormalities, intracranial calcification, abnormal cortical gyral patterns, ventriculomegaly, cerebral or cortical atrophy, chorioretinal abnormalities, and optic nerve abnormalities. Among infants with any Zika-associated birth defect, one third had more than one defect reported. Certain brain and eye defects in an infant might prompt suspicion of prenatal Zika virus infection. These findings can help target surveillance efforts to the most common brain and eye defects associated with Zika virus infection during pregnancy should a Zika virus outbreak reemerge, and might provide a signal to the reemergence of Zika virus, particularly in geographic regions without ongoing comprehensive Zika virus surveillance.
Salmon farming is one of Canada's fastest growing industries and contributes to Canada's economy as well as creating jobs in rural areas; however, the industry is challenged by the need to balance ...production economics against environmental impacts. While Atlantic salmon (Salmo salar) are the most commonly farmed species on the west coast of Canada, Chinook salmon (Oncorhynchus tshawytscha) are a valuable alternative, as they fill a niche market and generate reduced environmental concerns because they are a native species. However, Chinook salmon have not been systematically domesticated, and their performance remains highly variable. Here we report on the results of a research program designed to develop a performance-enhanced hybrid Chinook salmon stock. Growth and survival were estimated for seven domestic-wild hybrid Chinook salmon crosses at various freshwater stages and during 15 months of saltwater rearing at a British Columbia Chinook salmon farm and compared with domestic-domestic crosses (control). The project included 8640 individually (PIT) tagged offspring from the domestic stock and seven domestic-wild hybrid stocks originating from the Lower Fraser Valley, Lower Mainland Vancouver, and Vancouver Island, British Columbia, Canada. Within each stock, milt from 10 sires was used to fertilize eggs pooled from 15 highly inbred domestic females to produce 80 half-sib families. Our breeding design allows the partitioning of stock and sire effects, and minimises maternal genetic and maternal environment effects. Replicates of all families were reared under common environmental conditions in both fresh- and salt water and monitored for body size and survival. There was significant variation in survival, body size, and saltwater biomass among the Chinook salmon hybrid stocks. The performance of some of the hybrid crosses exceeded that of the fully domesticated stock, although the pattern of performance varied with rearing stage. Overall, two hybrid stocks consistently outperformed the domestic stock in terms of survival, growth, and biomass estimates. We systematically assess production performance across a wide range of wild-domestic hybrid crosses in a Pacific salmon species, and our results highlight opportunities to improve the production performance of Chinook salmon culture.
•Chinook salmon (Oncorhynchus tshawytscha) fill a niche aquaculture market, but performance remains variable.•Domestic fish were outcrossed with seven regional stocks and growth and survival surveyed during fresh- and saltwater stages.•Breeding design partitioned stock and sire effects, and minimized maternal-genetic and maternal-environment effects.•Significant performance variation across hybrids and rearing stage highlight prospects for improved Chinook salmon culture.
Measles, a highly contagious respiratory virus with the potential to cause severe complications, hospitalization, and death, was declared eliminated from the United States in 2000; however, with ...ongoing global transmission, infections in the United States still occur. On March 7, 2024, the Chicago Department of Public Health (CDPH) confirmed a case of measles in a male aged 1 year residing in a temporary shelter for migrants in Chicago. Given the congregate nature of the setting, high transmissibility of measles, and low measles vaccination coverage among shelter residents, measles virus had the potential to spread rapidly among approximately 2,100 presumed exposed shelter residents. CDPH immediately instituted outbreak investigation and response activities in collaboration with state and local health departments, health care facilities, city agencies, and shelters. On March 8, CDPH implemented active case-finding and coordinated a mass vaccination campaign at the affected shelter (shelter A), including vaccinating 882 residents and verifying previous vaccination for 784 residents over 3 days. These activities resulted in 93% measles vaccination coverage (defined as receipt of ≥1 recorded measles vaccine dose) by March 11. By May 13, a total of 57 confirmed measles cases associated with residing in or having contact with persons from shelter A had been reported. Most cases (41; 72%) were among persons who did not have documentation of measles vaccination and were considered unvaccinated. In addition, 16 cases of measles occurred among persons who had received ≥1 measles vaccine dose ≥21 days before first known exposure. This outbreak underscores the need to ensure high vaccination coverage among communities residing in congregate settings.
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